RNA–Protein interactions for RNA: ENST00000601801.2

NEAT1-203, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 4 BASIC

Gene NEAT1, Length 487 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-203ENST00000601801 ABCC10Q5T3U5 1492 aa24.89■■□□□ 1.58
NEAT1-203ENST00000601801 RUSC2Q8N2Y8 1516 aa24.89■■□□□ 1.57
NEAT1-203ENST00000601801 MAPKBP1O60336 1514 aa24.87■■□□□ 1.57
NEAT1-203ENST00000601801 DIP2BQ9P265 1576 aa24.84■■□□□ 1.57
NEAT1-203ENST00000601801 FAM69CQ0P6D2 419 aa24.84■■□□□ 1.57
NEAT1-203ENST00000601801 KIF27Q86VH2 1401 aa24.82■■□□□ 1.56
NEAT1-203ENST00000601801 ADCY10Q96PN6 1610 aa24.82■■□□□ 1.56
NEAT1-203ENST00000601801 NPM1P06748 294 aaKnown RBP eCLIP24.81■■□□□ 1.56
NEAT1-203ENST00000601801 IGF1RP08069 1367 aa24.77■■□□□ 1.56
NEAT1-203ENST00000601801 CUL7Q14999 1698 aa24.75■■□□□ 1.55
NEAT1-203ENST00000601801 KDM6BO15054 1643 aa24.75■■□□□ 1.55
NEAT1-203ENST00000601801 TSPOAP1O95153 1857 aa24.71■■□□□ 1.55
NEAT1-203ENST00000601801 KIAA0586Q9BVV6 1533 aa24.69■■□□□ 1.54
NEAT1-203ENST00000601801 KDM4FA0A1W2PPD8 638 aa24.68■■□□□ 1.54
NEAT1-203ENST00000601801 CARMIL1Q5VZK9 1371 aa24.63■■□□□ 1.53
NEAT1-203ENST00000601801 PTPRGP23470 1445 aa24.52■■□□□ 1.52
NEAT1-203ENST00000601801 PPRC1Q5VV67 1664 aaKnown RBP24.5■■□□□ 1.51
NEAT1-203ENST00000601801 ABCC2Q92887 1545 aa24.49■■□□□ 1.51
NEAT1-203ENST00000601801 GLI2P10070 1586 aa24.48■■□□□ 1.51
NEAT1-203ENST00000601801 TNIKQ9UKE5 1360 aa24.46■■□□□ 1.51
NEAT1-203ENST00000601801 IQGAP2Q13576 1575 aa24.46■■□□□ 1.51
NEAT1-203ENST00000601801 PLB1Q6P1J6 1458 aa24.45■■□□□ 1.5
NEAT1-203ENST00000601801 CARMIL2Q6F5E8 1435 aa24.44■■□□□ 1.5
NEAT1-203ENST00000601801 ASXL2Q76L83 1435 aa24.44■■□□□ 1.5
NEAT1-203ENST00000601801 RAPGEF2Q9Y4G8 1499 aa24.42■■□□□ 1.5
NEAT1-203ENST00000601801 TTBK1Q5TCY1 1321 aaPredicted RBP24.4■■□□□ 1.5
NEAT1-203ENST00000601801 UHRF1BP1LA0JNW5 1464 aa24.4■■□□□ 1.5
NEAT1-203ENST00000601801 ILDR1Q86SU0 546 aaPredicted RBP24.4■■□□□ 1.5
NEAT1-203ENST00000601801 ADGRL1O94910 1474 aa24.38■■□□□ 1.49
NEAT1-203ENST00000601801 UACAQ9BZF9 1416 aa24.35■■□□□ 1.49
NEAT1-203ENST00000601801 MAP3K4Q9Y6R4 1608 aa24.34■■□□□ 1.49
NEAT1-203ENST00000601801 DISP1Q96F81 1524 aa24.32■■□□□ 1.48
NEAT1-203ENST00000601801 COL17A1Q9UMD9 1497 aaPredicted RBP24.32■■□□□ 1.48
NEAT1-203ENST00000601801 EPRSP07814 1512 aaKnown RBP24.3■■□□□ 1.48
NEAT1-203ENST00000601801 KDM5BQ9UGL1 1544 aa24.3■■□□□ 1.48
NEAT1-203ENST00000601801 UGGT2Q9NYU1 1516 aa24.29■■□□□ 1.48
NEAT1-203ENST00000601801 ZCCHC11Q5TAX3 1644 aaKnown RBP24.27■■□□□ 1.48
NEAT1-203ENST00000601801 TEX14Q8IWB6 1497 aa24.26■■□□□ 1.47
NEAT1-203ENST00000601801 CTTNBP2Q8WZ74 1663 aa24.23■■□□□ 1.47
NEAT1-203ENST00000601801 KIAA0556O60303 1618 aa24.22■■□□□ 1.47
NEAT1-203ENST00000601801 HECW2Q9P2P5 1572 aa24.22■■□□□ 1.47
NEAT1-203ENST00000601801 PRXQ9BXM0 1461 aa24.18■■□□□ 1.46
NEAT1-203ENST00000601801 GOLGA3Q08378 1498 aa24.13■■□□□ 1.45
NEAT1-203ENST00000601801 WDR7Q9Y4E6 1490 aa24.13■■□□□ 1.45
NEAT1-203ENST00000601801 CFAP43Q8NDM7 1665 aa24.09■■□□□ 1.45
NEAT1-203ENST00000601801 MAGI3Q5TCQ9 1506 aa24.06■■□□□ 1.44
NEAT1-203ENST00000601801 CSRNP3Q8WYN3 585 aa24.04■■□□□ 1.44
NEAT1-203ENST00000601801 CD109Q6YHK3 1445 aa24.02■■□□□ 1.44
NEAT1-203ENST00000601801 ABCA8O94911 1581 aa24■■□□□ 1.43
NEAT1-203ENST00000601801 FAM9AQ8IZU1 332 aaPredicted RBP23.98■■□□□ 1.43
NEAT1-203ENST00000601801 KIF21BO75037 1637 aa23.97■■□□□ 1.43
NEAT1-203ENST00000601801 EEA1Q15075 1411 aa23.97■■□□□ 1.43
NEAT1-203ENST00000601801 KCNH8Q96L42 1107 aa23.94■■□□□ 1.42
NEAT1-203ENST00000601801 P3H3Q8IVL6 736 aa23.91■■□□□ 1.42
NEAT1-203ENST00000601801 ARAP3Q8WWN8 1544 aa23.89■■□□□ 1.41
NEAT1-203ENST00000601801 SAMD9Q5K651 1589 aa23.86■■□□□ 1.41
NEAT1-203ENST00000601801 ADAMTSL3P82987 1691 aa23.82■■□□□ 1.4
NEAT1-203ENST00000601801 ARID3CA6NKF2 412 aa23.81■■□□□ 1.4
NEAT1-203ENST00000601801 ABCA9Q8IUA7 1624 aa23.8■■□□□ 1.4
NEAT1-203ENST00000601801 FBXO41Q8TF61 875 aa23.79■■□□□ 1.4
NEAT1-203ENST00000601801 ATP10BO94823 1461 aa23.79■■□□□ 1.4
NEAT1-203ENST00000601801 RANGAP1P46060 587 aaPredicted RBP23.78■■□□□ 1.4
NEAT1-203ENST00000601801 PTPRMP28827 1452 aa23.77■■□□□ 1.4
NEAT1-203ENST00000601801 PHLDB1Q86UU1 1377 aa23.77■■□□□ 1.4
NEAT1-203ENST00000601801 RAPGEF6Q8TEU7 1601 aa23.77■■□□□ 1.4
NEAT1-203ENST00000601801 BCORL1Q5H9F3 1711 aa23.72■■□□□ 1.39
NEAT1-203ENST00000601801 FHOD3Q2V2M9 1422 aa23.7■■□□□ 1.38
NEAT1-203ENST00000601801 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.7■■□□□ 1.38
NEAT1-203ENST00000601801 HNRNPUL2Q1KMD3 747 aaKnown RBP23.7■■□□□ 1.38
NEAT1-203ENST00000601801 NEO1Q92859 1461 aa23.69■■□□□ 1.38
NEAT1-203ENST00000601801 FRMPD1Q5SYB0 1578 aa23.69■■□□□ 1.38
NEAT1-203ENST00000601801 RAPGEF3O95398 923 aa23.67■■□□□ 1.38
NEAT1-203ENST00000601801 CHIC1Q5VXU3 224 aa23.67■■□□□ 1.38
NEAT1-203ENST00000601801 EFCAB5A4FU69 1503 aa23.67■■□□□ 1.38
NEAT1-203ENST00000601801 MADDQ8WXG6 1647 aa23.66■■□□□ 1.38
NEAT1-203ENST00000601801 NUP153P49790 1475 aaKnown RBP23.66■■□□□ 1.38
NEAT1-203ENST00000601801 PCF11O94913 1555 aaKnown RBP23.65■■□□□ 1.38
NEAT1-203ENST00000601801 UBTFP17480 764 aaKnown RBP23.61■■□□□ 1.37
NEAT1-203ENST00000601801 LMTK3Q96Q04 1460 aa23.61■■□□□ 1.37
NEAT1-203ENST00000601801 EHMT2Q96KQ7 1210 aa23.6■■□□□ 1.37
NEAT1-203ENST00000601801 RIMS1Q86UR5 1692 aaKnown RBP23.58■■□□□ 1.37
NEAT1-203ENST00000601801 ARHGEF40Q8TER5 1519 aa23.58■■□□□ 1.36
NEAT1-203ENST00000601801 RICTORQ6R327 1708 aa23.57■■□□□ 1.36
NEAT1-203ENST00000601801 PLEKHD1A6NEE1 506 aa23.57■■□□□ 1.36
NEAT1-203ENST00000601801 ARID4BQ4LE39 1312 aaPredicted RBP23.57■■□□□ 1.36
NEAT1-203ENST00000601801 DENND4BO75064 1496 aaPredicted RBP23.5■■□□□ 1.35
NEAT1-203ENST00000601801 CFAP74Q9C0B2 1584 aa23.49■■□□□ 1.35
NEAT1-203ENST00000601801 FMN1Q68DA7 1419 aa23.47■■□□□ 1.35
NEAT1-203ENST00000601801 AKNAQ7Z591 1439 aa23.47■■□□□ 1.35
NEAT1-203ENST00000601801 SIGLEC1Q9BZZ2 1709 aa23.45■■□□□ 1.34
NEAT1-203ENST00000601801 ZMYM4Q5VZL5 1548 aa23.45■■□□□ 1.34
NEAT1-203ENST00000601801 CDK13Q14004 1512 aaKnown RBP23.44■■□□□ 1.34
NEAT1-203ENST00000601801 FANCAO15360 1455 aa23.44■■□□□ 1.34
NEAT1-203ENST00000601801 ARHGAP35Q9NRY4 1499 aa23.44■■□□□ 1.34
NEAT1-203ENST00000601801 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.43■■□□□ 1.34
NEAT1-203ENST00000601801 ATP1B4Q9UN42 357 aaPredicted RBP23.43■■□□□ 1.34
NEAT1-203ENST00000601801 POGZQ7Z3K3 1410 aa23.42■■□□□ 1.34
NEAT1-203ENST00000601801 HECW1Q76N89 1606 aa23.41■■□□□ 1.34
NEAT1-203ENST00000601801 HSPA2P54652 639 aa23.41■■□□□ 1.34
NEAT1-203ENST00000601801 TTC37Q6PGP7 1564 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms