RNA–Protein interactions for RNA: ENST00000601801.2

NEAT1-203, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 4 BASIC

Gene NEAT1, Length 487 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-203ENST00000601801 PRPF4O43172 522 aaKnown RBP eCLIP13.81□□□□□ -0.28e-50■■■□□ 18.3
NEAT1-203ENST00000601801 GTF2F1P35269 517 aaKnown RBP eCLIP16.05■□□□□ 0.164e-60■■■□□ 17.9
NEAT1-203ENST00000601801 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.35□□□□□ -0.271e-12■■■□□ 17.2
NEAT1-203ENST00000601801 CDC40O60508 579 aaKnown RBP eCLIP13.26□□□□□ -0.297e-32■■■□□ 16.9
NEAT1-203ENST00000601801 PCBP2Q15366 365 aaKnown RBP eCLIP13.19□□□□□ -0.31e-323■■■□□ 16.3
NEAT1-203ENST00000601801 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.53□□□□□ -0.081e-323■■■□□ 14.9
NEAT1-203ENST00000601801 U2AF1Q01081 240 aaKnown RBP eCLIP19.07■□□□□ 0.641e-42■■■□□ 14.7
NEAT1-203ENST00000601801 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.09■□□□□ 0.011e-15■■■□□ 14.6
NEAT1-203ENST00000601801 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.26■□□□□ 0.351e-323■■□□□ 14.3
NEAT1-203ENST00000601801 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.5□□□□□ -0.251e-323■■□□□ 14.1
NEAT1-203ENST00000601801 DDX6P26196 483 aaKnown RBP eCLIP15.3■□□□□ 0.045e-76■■□□□ 13.8
NEAT1-203ENST00000601801 RBFOX2O43251 390 aaKnown RBP eCLIP11.12□□□□□ -0.636e-26■■□□□ 13.3
NEAT1-203ENST00000601801 EWSR1Q01844 656 aaKnown RBP eCLIP11.18□□□□□ -0.628e-34■■□□□ 13.1
NEAT1-203ENST00000601801 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.22□□□□□ -0.135e-9■■□□□ 12.4
NEAT1-203ENST00000601801 AARSP49588 968 aaKnown RBP eCLIP15.48■□□□□ 0.074e-80■■□□□ 11.9
NEAT1-203ENST00000601801 FUSP35637 526 aaKnown RBP eCLIP9.65□□□□□ -0.863e-17■□□□□ 11.3
NEAT1-203ENST00000601801 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.35■■□□□ 1.177e-31■□□□□ 11.2
NEAT1-203ENST00000601801 FUBP3Q96I24 572 aaKnown RBP eCLIP15.28■□□□□ 0.048e-45■□□□□ 11.2
NEAT1-203ENST00000601801 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.82□□□□□ -0.26e-54■□□□□ 10.5
NEAT1-203ENST00000601801 TAF15Q92804 592 aaKnown RBP eCLIP11.81□□□□□ -0.524e-24■□□□□ 10.5
NEAT1-203ENST00000601801 ZRANB2O95218 330 aaKnown RBP eCLIP14.48□□□□□ -0.092e-38■□□□□ 10.4
NEAT1-203ENST00000601801 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.9■□□□□ 0.31e-323■□□□□ 10.2
NEAT1-203ENST00000601801 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.4□□□□□ -0.13e-20■□□□□ 10.2
NEAT1-203ENST00000601801 U2AF2P26368 475 aaKnown RBP eCLIP15.74■□□□□ 0.111e-323■□□□□ 10.2
NEAT1-203ENST00000601801 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.67□□□□□ -0.061e-323■□□□□ 9.7
NEAT1-203ENST00000601801 NCBP2P52298 156 aaKnown RBP eCLIP12.94□□□□□ -0.342e-27■□□□□ 9.5
NEAT1-203ENST00000601801 SRSF1Q07955 248 aaKnown RBP eCLIP14.22□□□□□ -0.132e-45■□□□□ 9.3
NEAT1-203ENST00000601801 BCCIPQ9P287 314 aaKnown RBP eCLIP15.03■□□□□ -03e-53■□□□□ 9.2
NEAT1-203ENST00000601801 SRSF7Q16629 238 aaKnown RBP eCLIP11.52□□□□□ -0.575e-10■□□□□ 9.1
NEAT1-203ENST00000601801 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.83□□□□□ -0.041e-323■□□□□ 8.9
NEAT1-203ENST00000601801 SRSF9Q13242 221 aaKnown RBP eCLIP9.55□□□□□ -0.884e-33■□□□□ 8.8
NEAT1-203ENST00000601801 HNRNPUQ00839 825 aaKnown RBP eCLIP18.15■□□□□ 0.51e-323■□□□□ 8.8
NEAT1-203ENST00000601801 HNRNPMP52272 730 aaKnown RBP eCLIP22.83■■□□□ 1.251e-323■□□□□ 8.7
NEAT1-203ENST00000601801 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.11■□□□□ 0.331e-25■□□□□ 8.7
NEAT1-203ENST00000601801 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.85□□□□□ -0.032e-6■□□□□ 8.6
NEAT1-203ENST00000601801 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.89■□□□□ 0.291e-323■□□□□ 8.4
NEAT1-203ENST00000601801 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.98□□□□□ -0.014e-33■□□□□ 8.2
Retrieved 37 of 37 RNA–protein pairs in 7.6 ms