RNA–Protein interactions for RNA: ENST00000601801.2

NEAT1-203, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 4 BASIC

Gene NEAT1, Length 487 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-203ENST00000601801 NISCHQ9Y2I1 1504 aa35.45■■■■□ 3.27
NEAT1-203ENST00000601801 ABCC9O60706 1549 aa32.31■■■□□ 2.76
NEAT1-203ENST00000601801 CCDC180Q9P1Z9 1646 aa31.97■■■□□ 2.71
NEAT1-203ENST00000601801 DNAJC5BQ9UF47 199 aa30.72■■■□□ 2.51
NEAT1-203ENST00000601801 RB1CC1Q8TDY2 1594 aa30.61■■■□□ 2.49
NEAT1-203ENST00000601801 NACADO15069 1562 aa30.29■■■□□ 2.44
NEAT1-203ENST00000601801 UNC13AQ9UPW8 1703 aa29.99■■■□□ 2.39
NEAT1-203ENST00000601801 PABPN1Q86U42 306 aaKnown RBP eCLIP29.98■■■□□ 2.39
NEAT1-203ENST00000601801 DCAF8L2P0C7V8 631 aa29.91■■■□□ 2.38
NEAT1-203ENST00000601801 BICRAQ9NZM4 1560 aa29.76■■■□□ 2.35
NEAT1-203ENST00000601801 MYO15BQ96JP2 1530 aa29.74■■■□□ 2.35
NEAT1-203ENST00000601801 ZCCHC6Q5VYS8 1495 aaKnown RBP29.4■■■□□ 2.3
NEAT1-203ENST00000601801 SHROOM4Q9ULL8 1493 aa29.3■■■□□ 2.28
NEAT1-203ENST00000601801 DCAF1Q9Y4B6 1507 aa29.3■■■□□ 2.28
NEAT1-203ENST00000601801 CC2D2AQ9P2K1 1620 aa29.21■■■□□ 2.27
NEAT1-203ENST00000601801 CECR2Q9BXF3 1484 aa29.17■■■□□ 2.26
NEAT1-203ENST00000601801 EIF4G1Q04637 1599 aaKnown RBP29.04■■■□□ 2.24
NEAT1-203ENST00000601801 SCRIBQ14160 1630 aa29.03■■■□□ 2.24
NEAT1-203ENST00000601801 DNAJC5Q9H3Z4 198 aa28.55■■■□□ 2.16
NEAT1-203ENST00000601801 CUX2O14529 1486 aa28.08■■■□□ 2.09
NEAT1-203ENST00000601801 NCAPD3P42695 1498 aa27.95■■■□□ 2.07
NEAT1-203ENST00000601801 ERCC6Q03468 1493 aa27.92■■■□□ 2.06
NEAT1-203ENST00000601801 ATAD2BQ9ULI0 1458 aa27.79■■■□□ 2.04
NEAT1-203ENST00000601801 HMGXB3Q12766 1538 aa27.72■■■□□ 2.03
NEAT1-203ENST00000601801 SMARCA2P51531 1590 aa27.7■■■□□ 2.03
NEAT1-203ENST00000601801 SMARCA4P51532 1647 aa27.68■■■□□ 2.02
NEAT1-203ENST00000601801 NESP48681 1621 aa27.65■■■□□ 2.02
NEAT1-203ENST00000601801 BAZ1AQ9NRL2 1556 aaPredicted RBP27.53■■■□□ 2
NEAT1-203ENST00000601801 THOC2Q8NI27 1593 aaKnown RBP27.51■■□□□ 1.99
NEAT1-203ENST00000601801 BAZ1BQ9UIG0 1483 aaKnown RBP27.49■■□□□ 1.99
NEAT1-203ENST00000601801 PEG3Q9GZU2 1588 aa27.43■■□□□ 1.98
NEAT1-203ENST00000601801 LAMC3Q9Y6N6 1575 aa27.42■■□□□ 1.98
NEAT1-203ENST00000601801 KIF21AQ7Z4S6 1674 aa27.33■■□□□ 1.97
NEAT1-203ENST00000601801 MROH2BQ7Z745 1585 aa27.31■■□□□ 1.96
NEAT1-203ENST00000601801 PDS5BQ9NTI5 1447 aa27.23■■□□□ 1.95
NEAT1-203ENST00000601801 CADPSQ9ULU8 1353 aa27.06■■□□□ 1.92
NEAT1-203ENST00000601801 TRIM41Q8WV44 630 aa27.05■■□□□ 1.92
NEAT1-203ENST00000601801 MRC2Q9UBG0 1479 aa27.04■■□□□ 1.92
NEAT1-203ENST00000601801 WDR62O43379 1518 aa27■■□□□ 1.91
NEAT1-203ENST00000601801 WIZO95785 1651 aa27■■□□□ 1.91
NEAT1-203ENST00000601801 CEP164Q9UPV0 1460 aa26.83■■□□□ 1.89
NEAT1-203ENST00000601801 RSF1Q96T23 1441 aaPredicted RBP26.8■■□□□ 1.88
NEAT1-203ENST00000601801 FANCD2Q9BXW9 1451 aa26.75■■□□□ 1.87
NEAT1-203ENST00000601801 CFTRP13569 1480 aa26.68■■□□□ 1.86
NEAT1-203ENST00000601801 TOP2AP11388 1531 aaKnown RBP26.67■■□□□ 1.86
NEAT1-203ENST00000601801 OSCARQ8IYS5 282 aa26.66■■□□□ 1.86
NEAT1-203ENST00000601801 URB2Q14146 1524 aaKnown RBP26.58■■□□□ 1.85
NEAT1-203ENST00000601801 PRDM2Q13029 1718 aa26.47■■□□□ 1.83
NEAT1-203ENST00000601801 RIMBP3CA6NJZ7 1639 aa26.44■■□□□ 1.82
NEAT1-203ENST00000601801 RIMBP3BA6NNM3 1639 aa26.44■■□□□ 1.82
NEAT1-203ENST00000601801 RIMBP3Q9UFD9 1639 aa26.44■■□□□ 1.82
NEAT1-203ENST00000601801 CCDC88BA6NC98 1476 aa26.36■■□□□ 1.81
NEAT1-203ENST00000601801 IFT140Q96RY7 1462 aa26.31■■□□□ 1.8
NEAT1-203ENST00000601801 ZNF608Q9ULD9 1512 aaPredicted RBP26.31■■□□□ 1.8
NEAT1-203ENST00000601801 ARHGEF11O15085 1522 aa26.29■■□□□ 1.8
NEAT1-203ENST00000601801 TOPBP1Q92547 1522 aa26.21■■□□□ 1.79
NEAT1-203ENST00000601801 EIF4G3O43432 1585 aaKnown RBP26.18■■□□□ 1.78
NEAT1-203ENST00000601801 ABCC8Q09428 1581 aa26.13■■□□□ 1.77
NEAT1-203ENST00000601801 CHD1O14646 1710 aa26.11■■□□□ 1.77
NEAT1-203ENST00000601801 DNMBPQ6XZF7 1577 aa26.09■■□□□ 1.77
NEAT1-203ENST00000601801 CYB5RLQ6IPT4 315 aa26.06■■□□□ 1.76
NEAT1-203ENST00000601801 TARBP1Q13395 1621 aaKnown RBP26.05■■□□□ 1.76
NEAT1-203ENST00000601801 AQRO60306 1485 aaKnown RBP eCLIP26■■□□□ 1.75
NEAT1-203ENST00000601801 ARAP1Q96P48 1450 aa25.99■■□□□ 1.75
NEAT1-203ENST00000601801 POLA1P09884 1462 aaPredicted RBP25.91■■□□□ 1.74
NEAT1-203ENST00000601801 TRHP20396 242 aaPredicted RBP25.9■■□□□ 1.74
NEAT1-203ENST00000601801 FBLN2P98095 1184 aa25.87■■□□□ 1.73
NEAT1-203ENST00000601801 RAD54L2Q9Y4B4 1467 aa25.81■■□□□ 1.72
NEAT1-203ENST00000601801 CLASP1Q7Z460 1538 aa25.77■■□□□ 1.72
NEAT1-203ENST00000601801 WDR97A6NE52 1622 aa25.77■■□□□ 1.72
NEAT1-203ENST00000601801 TDRD9Q8NDG6 1382 aaKnown RBP25.76■■□□□ 1.71
NEAT1-203ENST00000601801 SOGA1O94964 1423 aa25.76■■□□□ 1.71
NEAT1-203ENST00000601801 SUPT5HO00267 1087 aaKnown RBP25.75■■□□□ 1.71
NEAT1-203ENST00000601801 SNAPC4Q5SXM2 1469 aa25.73■■□□□ 1.71
NEAT1-203ENST00000601801 SYNJ1O43426 1573 aa25.69■■□□□ 1.7
NEAT1-203ENST00000601801 FGD5Q6ZNL6 1462 aa25.68■■□□□ 1.7
NEAT1-203ENST00000601801 MAGI1Q96QZ7 1491 aaPredicted RBP25.66■■□□□ 1.7
NEAT1-203ENST00000601801 CUX1P39880 1505 aa25.65■■□□□ 1.7
NEAT1-203ENST00000601801 CHMP7Q8WUX9 453 aaPredicted RBP25.63■■□□□ 1.69
NEAT1-203ENST00000601801 GRIN2BQ13224 1484 aa25.6■■□□□ 1.69
NEAT1-203ENST00000601801 SYNJ2O15056 1496 aa25.58■■□□□ 1.69
NEAT1-203ENST00000601801 PBRM1Q86U86 1689 aa25.55■■□□□ 1.68
NEAT1-203ENST00000601801 GAPVD1Q14C86 1478 aa25.48■■□□□ 1.67
NEAT1-203ENST00000601801 AEBP2Q6ZN18 517 aaPredicted RBP25.48■■□□□ 1.67
NEAT1-203ENST00000601801 ABCA5Q8WWZ7 1642 aa25.41■■□□□ 1.66
NEAT1-203ENST00000601801 ABCA10Q8WWZ4 1543 aa25.38■■□□□ 1.65
NEAT1-203ENST00000601801 WRNQ14191 1432 aaPredicted RBP eCLIP25.32■■□□□ 1.64
NEAT1-203ENST00000601801 ERCC6L2Q5T890 1561 aa25.31■■□□□ 1.64
NEAT1-203ENST00000601801 TOP2BQ02880 1626 aa25.3■■□□□ 1.64
NEAT1-203ENST00000601801 BIVM-ERCC5R4GMW8 1640 aa25.3■■□□□ 1.64
NEAT1-203ENST00000601801 GRIN2AQ12879 1464 aa25.28■■□□□ 1.64
NEAT1-203ENST00000601801 CEP170Q5SW79 1584 aa25.25■■□□□ 1.63
NEAT1-203ENST00000601801 ADAMTS12P58397 1594 aa25.24■■□□□ 1.63
NEAT1-203ENST00000601801 NUP160Q12769 1436 aa25.22■■□□□ 1.63
NEAT1-203ENST00000601801 SHROOM2Q13796 1616 aa25.21■■□□□ 1.63
NEAT1-203ENST00000601801 KIF13AQ9H1H9 1805 aa25.15■■□□□ 1.62
NEAT1-203ENST00000601801 FHAD1B1AJZ9 1412 aa25.12■■□□□ 1.61
NEAT1-203ENST00000601801 ERICH3Q5RHP9 1530 aa25.07■■□□□ 1.6
NEAT1-203ENST00000601801 PRG4Q92954 1404 aaPredicted RBP24.99■■□□□ 1.59
NEAT1-203ENST00000601801 JPH4Q96JJ6 628 aa24.92■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms