RNA–Protein interactions for RNA: ENST00000601267.5

C19orf48-213, Transcript of chromosome 19 open reading frame 48, humanhuman

TSL 2

Gene C19orf48, Length 782 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf48-213ENST00000601267 RUSC2Q8N2Y8 1516 aa21.8■■□□□ 1.08
C19orf48-213ENST00000601267 NPM1P06748 294 aaKnown RBP eCLIP21.73■■□□□ 1.07
C19orf48-213ENST00000601267 FAM69CQ0P6D2 419 aa21.73■■□□□ 1.07
C19orf48-213ENST00000601267 ABCC10Q5T3U5 1492 aa21.7■■□□□ 1.06
C19orf48-213ENST00000601267 ADCY10Q96PN6 1610 aa21.69■■□□□ 1.06
C19orf48-213ENST00000601267 DIP2BQ9P265 1576 aa21.66■■□□□ 1.06
C19orf48-213ENST00000601267 MAPKBP1O60336 1514 aa21.66■■□□□ 1.06
C19orf48-213ENST00000601267 KIAA0586Q9BVV6 1533 aa21.61■■□□□ 1.05
C19orf48-213ENST00000601267 CUL7Q14999 1698 aa21.6■■□□□ 1.05
C19orf48-213ENST00000601267 TSPOAP1O95153 1857 aa21.59■■□□□ 1.05
C19orf48-213ENST00000601267 TTBK1Q5TCY1 1321 aaPredicted RBP21.58■■□□□ 1.05
C19orf48-213ENST00000601267 KIF27Q86VH2 1401 aa21.58■■□□□ 1.05
C19orf48-213ENST00000601267 KDM6BO15054 1643 aa21.58■■□□□ 1.04
C19orf48-213ENST00000601267 IGF1RP08069 1367 aa21.57■■□□□ 1.04
C19orf48-213ENST00000601267 PTPRGP23470 1445 aa21.49■■□□□ 1.03
C19orf48-213ENST00000601267 CARMIL1Q5VZK9 1371 aa21.45■■□□□ 1.02
C19orf48-213ENST00000601267 KDM4FA0A1W2PPD8 638 aa21.44■■□□□ 1.02
C19orf48-213ENST00000601267 CARMIL2Q6F5E8 1435 aa21.44■■□□□ 1.02
C19orf48-213ENST00000601267 TNIKQ9UKE5 1360 aa21.42■■□□□ 1.02
C19orf48-213ENST00000601267 ABCC2Q92887 1545 aa21.41■■□□□ 1.02
C19orf48-213ENST00000601267 IQGAP2Q13576 1575 aa21.4■■□□□ 1.02
C19orf48-213ENST00000601267 ASXL2Q76L83 1435 aa21.38■■□□□ 1.01
C19orf48-213ENST00000601267 PLB1Q6P1J6 1458 aa21.35■■□□□ 1.01
C19orf48-213ENST00000601267 PPRC1Q5VV67 1664 aaKnown RBP21.34■■□□□ 1.01
C19orf48-213ENST00000601267 GLI2P10070 1586 aa21.31■■□□□ 1
C19orf48-213ENST00000601267 UACAQ9BZF9 1416 aa21.31■■□□□ 1
C19orf48-213ENST00000601267 UHRF1BP1LA0JNW5 1464 aa21.31■■□□□ 1
C19orf48-213ENST00000601267 DISP1Q96F81 1524 aa21.29■■□□□ 1
C19orf48-213ENST00000601267 ZCCHC11Q5TAX3 1644 aaKnown RBP21.25■□□□□ 0.99
C19orf48-213ENST00000601267 ADGRL1O94910 1474 aa21.25■□□□□ 0.99
C19orf48-213ENST00000601267 EPRSP07814 1512 aaKnown RBP21.24■□□□□ 0.99
C19orf48-213ENST00000601267 RAPGEF2Q9Y4G8 1499 aa21.23■□□□□ 0.99
C19orf48-213ENST00000601267 KIAA0556O60303 1618 aa21.22■□□□□ 0.99
C19orf48-213ENST00000601267 MAP3K4Q9Y6R4 1608 aa21.22■□□□□ 0.99
C19orf48-213ENST00000601267 UGGT2Q9NYU1 1516 aa21.22■□□□□ 0.99
C19orf48-213ENST00000601267 KDM5BQ9UGL1 1544 aa21.22■□□□□ 0.99
C19orf48-213ENST00000601267 COL17A1Q9UMD9 1497 aaPredicted RBP21.2■□□□□ 0.98
C19orf48-213ENST00000601267 TEX14Q8IWB6 1497 aa21.19■□□□□ 0.98
C19orf48-213ENST00000601267 WDR7Q9Y4E6 1490 aa21.13■□□□□ 0.97
C19orf48-213ENST00000601267 ILDR1Q86SU0 546 aaPredicted RBP21.12■□□□□ 0.97
C19orf48-213ENST00000601267 CTTNBP2Q8WZ74 1663 aa21.12■□□□□ 0.97
C19orf48-213ENST00000601267 KCNH8Q96L42 1107 aa21.06■□□□□ 0.96
C19orf48-213ENST00000601267 HECW2Q9P2P5 1572 aa21.06■□□□□ 0.96
C19orf48-213ENST00000601267 GOLGA3Q08378 1498 aa21.04■□□□□ 0.96
C19orf48-213ENST00000601267 CD109Q6YHK3 1445 aa21.03■□□□□ 0.96
C19orf48-213ENST00000601267 CFAP43Q8NDM7 1665 aa21.02■□□□□ 0.96
C19orf48-213ENST00000601267 ABCA8O94911 1581 aa21.02■□□□□ 0.95
C19orf48-213ENST00000601267 MAGI3Q5TCQ9 1506 aa20.99■□□□□ 0.95
C19orf48-213ENST00000601267 ARID3CA6NKF2 412 aa20.97■□□□□ 0.95
C19orf48-213ENST00000601267 KIF21BO75037 1637 aa20.94■□□□□ 0.94
C19orf48-213ENST00000601267 P3H3Q8IVL6 736 aa20.91■□□□□ 0.94
C19orf48-213ENST00000601267 PRXQ9BXM0 1461 aa20.9■□□□□ 0.94
C19orf48-213ENST00000601267 FAM9AQ8IZU1 332 aaPredicted RBP20.88■□□□□ 0.93
C19orf48-213ENST00000601267 ATP10BO94823 1461 aa20.83■□□□□ 0.93
C19orf48-213ENST00000601267 ARAP3Q8WWN8 1544 aa20.83■□□□□ 0.92
C19orf48-213ENST00000601267 ABCA9Q8IUA7 1624 aa20.79■□□□□ 0.92
C19orf48-213ENST00000601267 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.79■□□□□ 0.92
C19orf48-213ENST00000601267 HNRNPUL2Q1KMD3 747 aaKnown RBP20.79■□□□□ 0.92
C19orf48-213ENST00000601267 RAPGEF6Q8TEU7 1601 aa20.77■□□□□ 0.92
C19orf48-213ENST00000601267 SAMD9Q5K651 1589 aa20.76■□□□□ 0.91
C19orf48-213ENST00000601267 RAPGEF3O95398 923 aa20.75■□□□□ 0.91
C19orf48-213ENST00000601267 RANGAP1P46060 587 aaPredicted RBP20.75■□□□□ 0.91
C19orf48-213ENST00000601267 PHLDB1Q86UU1 1377 aa20.72■□□□□ 0.91
C19orf48-213ENST00000601267 PTPRMP28827 1452 aa20.72■□□□□ 0.91
C19orf48-213ENST00000601267 ADAMTSL3P82987 1691 aa20.72■□□□□ 0.91
C19orf48-213ENST00000601267 ARID4BQ4LE39 1312 aaPredicted RBP20.71■□□□□ 0.91
C19orf48-213ENST00000601267 NEO1Q92859 1461 aa20.7■□□□□ 0.9
C19orf48-213ENST00000601267 FRMPD1Q5SYB0 1578 aa20.69■□□□□ 0.9
C19orf48-213ENST00000601267 CSRNP3Q8WYN3 585 aa20.69■□□□□ 0.9
C19orf48-213ENST00000601267 NUP153P49790 1475 aaKnown RBP20.67■□□□□ 0.9
C19orf48-213ENST00000601267 MADDQ8WXG6 1647 aa20.67■□□□□ 0.9
C19orf48-213ENST00000601267 BCORL1Q5H9F3 1711 aa20.67■□□□□ 0.9
C19orf48-213ENST00000601267 FHOD3Q2V2M9 1422 aa20.66■□□□□ 0.9
C19orf48-213ENST00000601267 FBXO41Q8TF61 875 aa20.62■□□□□ 0.89
C19orf48-213ENST00000601267 ARHGEF40Q8TER5 1519 aa20.61■□□□□ 0.89
C19orf48-213ENST00000601267 RIMS1Q86UR5 1692 aaKnown RBP20.61■□□□□ 0.89
C19orf48-213ENST00000601267 PCF11O94913 1555 aaKnown RBP20.59■□□□□ 0.89
C19orf48-213ENST00000601267 DENND4BO75064 1496 aaPredicted RBP20.59■□□□□ 0.89
C19orf48-213ENST00000601267 PLEKHD1A6NEE1 506 aa20.59■□□□□ 0.89
C19orf48-213ENST00000601267 PLPPR3Q6T4P5 718 aa20.59■□□□□ 0.89
C19orf48-213ENST00000601267 RICTORQ6R327 1708 aa20.58■□□□□ 0.88
C19orf48-213ENST00000601267 FANCAO15360 1455 aa20.56■□□□□ 0.88
C19orf48-213ENST00000601267 CFAP74Q9C0B2 1584 aa20.56■□□□□ 0.88
C19orf48-213ENST00000601267 AKNAQ7Z591 1439 aa20.56■□□□□ 0.88
C19orf48-213ENST00000601267 LMTK3Q96Q04 1460 aa20.56■□□□□ 0.88
C19orf48-213ENST00000601267 TTC37Q6PGP7 1564 aa20.55■□□□□ 0.88
C19orf48-213ENST00000601267 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.54■□□□□ 0.88not detected■■□□□ 13.5
C19orf48-213ENST00000601267 EEA1Q15075 1411 aa20.53■□□□□ 0.88
C19orf48-213ENST00000601267 ZFYVE16Q7Z3T8 1539 aa20.51■□□□□ 0.87
C19orf48-213ENST00000601267 EFCAB5A4FU69 1503 aa20.49■□□□□ 0.87
C19orf48-213ENST00000601267 CDK13Q14004 1512 aaKnown RBP20.49■□□□□ 0.87
C19orf48-213ENST00000601267 POGZQ7Z3K3 1410 aa20.49■□□□□ 0.87
C19orf48-213ENST00000601267 YEATS2Q9ULM3 1422 aa20.48■□□□□ 0.87
C19orf48-213ENST00000601267 HSPA2P54652 639 aa20.48■□□□□ 0.87
C19orf48-213ENST00000601267 MLECQ14165 292 aa20.48■□□□□ 0.87
C19orf48-213ENST00000601267 ZMYM4Q5VZL5 1548 aa20.48■□□□□ 0.87
C19orf48-213ENST00000601267 SIGLEC1Q9BZZ2 1709 aa20.47■□□□□ 0.87
C19orf48-213ENST00000601267 EHMT2Q96KQ7 1210 aa20.45■□□□□ 0.86
C19orf48-213ENST00000601267 HECW1Q76N89 1606 aa20.44■□□□□ 0.86
C19orf48-213ENST00000601267 FER1L4A9Z1Z3 1794 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms