RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 RUSC2Q8N2Y8 1516 aa31.65■■■□□ 2.66
CCDC9-205ENST00000600117 PRG4Q92954 1404 aaPredicted RBP31.63■■■□□ 2.65
CCDC9-205ENST00000600117 IGF1RP08069 1367 aa31.56■■■□□ 2.64
CCDC9-205ENST00000600117 JPH4Q96JJ6 628 aa31.56■■■□□ 2.64
CCDC9-205ENST00000600117 ABCC10Q5T3U5 1492 aa31.54■■■□□ 2.64
CCDC9-205ENST00000600117 FAM69CQ0P6D2 419 aa31.51■■■□□ 2.63
CCDC9-205ENST00000600117 MAPKBP1O60336 1514 aa31.49■■■□□ 2.63
CCDC9-205ENST00000600117 NPM1P06748 294 aaKnown RBP eCLIP31.46■■■□□ 2.63
CCDC9-205ENST00000600117 EEA1Q15075 1411 aa31.46■■■□□ 2.63
CCDC9-205ENST00000600117 CUL7Q14999 1698 aa31.44■■■□□ 2.62
CCDC9-205ENST00000600117 DIP2BQ9P265 1576 aa31.44■■■□□ 2.62
CCDC9-205ENST00000600117 ADCY10Q96PN6 1610 aa31.38■■■□□ 2.61
CCDC9-205ENST00000600117 CARMIL1Q5VZK9 1371 aa31.37■■■□□ 2.61
CCDC9-205ENST00000600117 KDM6BO15054 1643 aa31.35■■■□□ 2.61
CCDC9-205ENST00000600117 CSRNP3Q8WYN3 585 aa31.33■■■□□ 2.61
CCDC9-205ENST00000600117 KDM4FA0A1W2PPD8 638 aa31.32■■■□□ 2.6
CCDC9-205ENST00000600117 FAM9AQ8IZU1 332 aaPredicted RBP31.32■■■□□ 2.6
CCDC9-205ENST00000600117 PRXQ9BXM0 1461 aa31.29■■■□□ 2.6
CCDC9-205ENST00000600117 TSPOAP1O95153 1857 aa31.26■■■□□ 2.59
CCDC9-205ENST00000600117 RAPGEF2Q9Y4G8 1499 aa31.24■■■□□ 2.59
CCDC9-205ENST00000600117 KIAA0586Q9BVV6 1533 aa31.22■■■□□ 2.59
CCDC9-205ENST00000600117 KIF21BO75037 1637 aa31.13■■■□□ 2.57
CCDC9-205ENST00000600117 ILDR1Q86SU0 546 aaPredicted RBP31.05■■■□□ 2.56
CCDC9-205ENST00000600117 PTPRGP23470 1445 aa31.05■■■□□ 2.56
CCDC9-205ENST00000600117 ABCC2Q92887 1545 aa30.99■■■□□ 2.55
CCDC9-205ENST00000600117 GLI2P10070 1586 aa30.97■■■□□ 2.55
CCDC9-205ENST00000600117 PPRC1Q5VV67 1664 aaKnown RBP30.97■■■□□ 2.55
CCDC9-205ENST00000600117 GOLGA3Q08378 1498 aa30.95■■■□□ 2.55
CCDC9-205ENST00000600117 PLB1Q6P1J6 1458 aa30.95■■■□□ 2.55
CCDC9-205ENST00000600117 TNIKQ9UKE5 1360 aa30.94■■■□□ 2.54
CCDC9-205ENST00000600117 ASXL2Q76L83 1435 aa30.94■■■□□ 2.54
CCDC9-205ENST00000600117 CTTNBP2Q8WZ74 1663 aa30.93■■■□□ 2.54
CCDC9-205ENST00000600117 CARMIL2Q6F5E8 1435 aa30.93■■■□□ 2.54
CCDC9-205ENST00000600117 ADGRL1O94910 1474 aa30.91■■■□□ 2.54
CCDC9-205ENST00000600117 IQGAP2Q13576 1575 aa30.9■■■□□ 2.54
CCDC9-205ENST00000600117 TTBK1Q5TCY1 1321 aaPredicted RBP30.9■■■□□ 2.54
CCDC9-205ENST00000600117 UHRF1BP1LA0JNW5 1464 aa30.87■■■□□ 2.53
CCDC9-205ENST00000600117 EHMT2Q96KQ7 1210 aa30.86■■■□□ 2.53
CCDC9-205ENST00000600117 UACAQ9BZF9 1416 aa30.8■■■□□ 2.52
CCDC9-205ENST00000600117 COL17A1Q9UMD9 1497 aaPredicted RBP30.79■■■□□ 2.52
CCDC9-205ENST00000600117 UGGT2Q9NYU1 1516 aa30.78■■■□□ 2.52
CCDC9-205ENST00000600117 MAP3K4Q9Y6R4 1608 aa30.77■■■□□ 2.52
CCDC9-205ENST00000600117 UBTFP17480 764 aaKnown RBP30.77■■■□□ 2.52
CCDC9-205ENST00000600117 EPRSP07814 1512 aaKnown RBP30.76■■■□□ 2.51
CCDC9-205ENST00000600117 TEX14Q8IWB6 1497 aa30.73■■■□□ 2.51
CCDC9-205ENST00000600117 DISP1Q96F81 1524 aa30.73■■■□□ 2.51
CCDC9-205ENST00000600117 KDM5BQ9UGL1 1544 aa30.73■■■□□ 2.51
CCDC9-205ENST00000600117 HECW2Q9P2P5 1572 aa30.71■■■□□ 2.51
CCDC9-205ENST00000600117 ZCCHC11Q5TAX3 1644 aaKnown RBP30.65■■■□□ 2.5
CCDC9-205ENST00000600117 LOC105371045A0A1W2PR82 267 aa30.65■■■□□ 2.5
CCDC9-205ENST00000600117 KIAA0556O60303 1618 aa30.62■■■□□ 2.49
CCDC9-205ENST00000600117 SAMD9Q5K651 1589 aa30.59■■■□□ 2.49
CCDC9-205ENST00000600117 WDR7Q9Y4E6 1490 aa30.54■■■□□ 2.48
CCDC9-205ENST00000600117 RANGAP1P46060 587 aaPredicted RBP30.52■■■□□ 2.48
CCDC9-205ENST00000600117 EFCAB5A4FU69 1503 aa30.51■■■□□ 2.47
CCDC9-205ENST00000600117 ARHGAP35Q9NRY4 1499 aa30.46■■■□□ 2.47
CCDC9-205ENST00000600117 MAGI3Q5TCQ9 1506 aa30.45■■■□□ 2.47
CCDC9-205ENST00000600117 CFAP43Q8NDM7 1665 aa30.45■■■□□ 2.46
CCDC9-205ENST00000600117 P3H3Q8IVL6 736 aa30.44■■■□□ 2.46
CCDC9-205ENST00000600117 CD109Q6YHK3 1445 aa30.42■■■□□ 2.46
CCDC9-205ENST00000600117 CLIP1P30622 1438 aa30.4■■■□□ 2.46
CCDC9-205ENST00000600117 FHOD3Q2V2M9 1422 aa30.4■■■□□ 2.46
CCDC9-205ENST00000600117 CEP162Q5TB80 1403 aa30.39■■■□□ 2.46
CCDC9-205ENST00000600117 KCNH8Q96L42 1107 aa30.32■■■□□ 2.44
CCDC9-205ENST00000600117 ABCA8O94911 1581 aa30.32■■■□□ 2.44
CCDC9-205ENST00000600117 FBXO41Q8TF61 875 aa30.26■■■□□ 2.43
CCDC9-205ENST00000600117 ARAP3Q8WWN8 1544 aa30.23■■■□□ 2.43
CCDC9-205ENST00000600117 FMN1Q68DA7 1419 aa30.2■■■□□ 2.42
CCDC9-205ENST00000600117 RAPGEF6Q8TEU7 1601 aa30.18■■■□□ 2.42
CCDC9-205ENST00000600117 ADAMTSL3P82987 1691 aa30.14■■■□□ 2.41
CCDC9-205ENST00000600117 PTPRMP28827 1452 aa30.13■■■□□ 2.41
CCDC9-205ENST00000600117 PHLDB1Q86UU1 1377 aa30.12■■■□□ 2.41
CCDC9-205ENST00000600117 NUP153P49790 1475 aaKnown RBP30.08■■■□□ 2.41
CCDC9-205ENST00000600117 ABCA9Q8IUA7 1624 aa30.07■■■□□ 2.4
CCDC9-205ENST00000600117 PCF11O94913 1555 aaKnown RBP30.07■■■□□ 2.4
CCDC9-205ENST00000600117 ATP10BO94823 1461 aa30.05■■■□□ 2.4
CCDC9-205ENST00000600117 CASKIN1Q8WXD9 1431 aa30.05■■■□□ 2.4
CCDC9-205ENST00000600117 HECW1Q76N89 1606 aa30.03■■■□□ 2.4
CCDC9-205ENST00000600117 BCORL1Q5H9F3 1711 aa30■■■□□ 2.39
CCDC9-205ENST00000600117 VPS8Q8N3P4 1428 aa30■■■□□ 2.39
CCDC9-205ENST00000600117 NEO1Q92859 1461 aa29.99■■■□□ 2.39
CCDC9-205ENST00000600117 FYCO1Q9BQS8 1478 aa29.99■■■□□ 2.39
CCDC9-205ENST00000600117 ARID3CA6NKF2 412 aa29.99■■■□□ 2.39
CCDC9-205ENST00000600117 RAPGEF3O95398 923 aa29.98■■■□□ 2.39
CCDC9-205ENST00000600117 MADDQ8WXG6 1647 aa29.96■■■□□ 2.39
CCDC9-205ENST00000600117 LRRIQ1Q96JM4 1722 aa29.95■■■□□ 2.38
CCDC9-205ENST00000600117 CDK13Q14004 1512 aaKnown RBP29.92■■■□□ 2.38
CCDC9-205ENST00000600117 FRMPD1Q5SYB0 1578 aa29.92■■■□□ 2.38
CCDC9-205ENST00000600117 ATP1B4Q9UN42 357 aaPredicted RBP29.92■■■□□ 2.38
CCDC9-205ENST00000600117 LMTK3Q96Q04 1460 aa29.92■■■□□ 2.38
CCDC9-205ENST00000600117 ARID4BQ4LE39 1312 aaPredicted RBP29.9■■■□□ 2.38
CCDC9-205ENST00000600117 CCDC18Q5T9S5 1454 aa29.86■■■□□ 2.37
CCDC9-205ENST00000600117 RIMS1Q86UR5 1692 aaKnown RBP29.82■■■□□ 2.36
CCDC9-205ENST00000600117 ARHGEF40Q8TER5 1519 aa29.82■■■□□ 2.36
CCDC9-205ENST00000600117 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.81■■■□□ 2.36
CCDC9-205ENST00000600117 HNRNPUL2Q1KMD3 747 aaKnown RBP29.81■■■□□ 2.36
CCDC9-205ENST00000600117 RICTORQ6R327 1708 aa29.77■■■□□ 2.36
CCDC9-205ENST00000600117 DENND4BO75064 1496 aaPredicted RBP29.75■■■□□ 2.35
CCDC9-205ENST00000600117 PLEKHD1A6NEE1 506 aa29.72■■■□□ 2.35
CCDC9-205ENST00000600117 TIAM1Q13009 1591 aa29.71■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms