RNA–Protein interactions for RNA: ENST00000599693.5

XRCC1-209, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 3

Gene XRCC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-209ENST00000599693 JPH4Q96JJ6 628 aa26.76■■□□□ 1.87
XRCC1-209ENST00000599693 MAPKBP1O60336 1514 aa26.65■■□□□ 1.86
XRCC1-209ENST00000599693 ABCC10Q5T3U5 1492 aa26.64■■□□□ 1.86
XRCC1-209ENST00000599693 ADCY10Q96PN6 1610 aa26.61■■□□□ 1.85
XRCC1-209ENST00000599693 DIP2BQ9P265 1576 aa26.59■■□□□ 1.85
XRCC1-209ENST00000599693 NPM1P06748 294 aaKnown RBP eCLIP26.58■■□□□ 1.85
XRCC1-209ENST00000599693 FAM69CQ0P6D2 419 aa26.58■■□□□ 1.85
XRCC1-209ENST00000599693 KIAA0586Q9BVV6 1533 aa26.56■■□□□ 1.84
XRCC1-209ENST00000599693 CUL7Q14999 1698 aa26.55■■□□□ 1.84
XRCC1-209ENST00000599693 IGF1RP08069 1367 aa26.5■■□□□ 1.83
XRCC1-209ENST00000599693 KIF27Q86VH2 1401 aa26.49■■□□□ 1.83
XRCC1-209ENST00000599693 KDM6BO15054 1643 aa26.44■■□□□ 1.82
XRCC1-209ENST00000599693 TSPOAP1O95153 1857 aa26.4■■□□□ 1.82
XRCC1-209ENST00000599693 PTPRGP23470 1445 aa26.36■■□□□ 1.81
XRCC1-209ENST00000599693 CARMIL1Q5VZK9 1371 aa26.33■■□□□ 1.8
XRCC1-209ENST00000599693 CARMIL2Q6F5E8 1435 aa26.31■■□□□ 1.8
XRCC1-209ENST00000599693 ABCC2Q92887 1545 aa26.3■■□□□ 1.8
XRCC1-209ENST00000599693 TNIKQ9UKE5 1360 aa26.3■■□□□ 1.8
XRCC1-209ENST00000599693 IQGAP2Q13576 1575 aa26.29■■□□□ 1.8
XRCC1-209ENST00000599693 KDM4FA0A1W2PPD8 638 aa26.26■■□□□ 1.79
XRCC1-209ENST00000599693 TTBK1Q5TCY1 1321 aaPredicted RBP26.25■■□□□ 1.79
XRCC1-209ENST00000599693 GLI2P10070 1586 aa26.23■■□□□ 1.79
XRCC1-209ENST00000599693 PLB1Q6P1J6 1458 aa26.23■■□□□ 1.79
XRCC1-209ENST00000599693 ASXL2Q76L83 1435 aa26.22■■□□□ 1.79
XRCC1-209ENST00000599693 UHRF1BP1LA0JNW5 1464 aa26.22■■□□□ 1.79
XRCC1-209ENST00000599693 PPRC1Q5VV67 1664 aaKnown RBP26.22■■□□□ 1.79
XRCC1-209ENST00000599693 DISP1Q96F81 1524 aa26.17■■□□□ 1.78
XRCC1-209ENST00000599693 UACAQ9BZF9 1416 aa26.16■■□□□ 1.78
XRCC1-209ENST00000599693 UGGT2Q9NYU1 1516 aa26.1■■□□□ 1.77
XRCC1-209ENST00000599693 KDM5BQ9UGL1 1544 aa26.1■■□□□ 1.77
XRCC1-209ENST00000599693 MAP3K4Q9Y6R4 1608 aa26.08■■□□□ 1.77
XRCC1-209ENST00000599693 EPRSP07814 1512 aaKnown RBP26.08■■□□□ 1.77
XRCC1-209ENST00000599693 RAPGEF2Q9Y4G8 1499 aa26.07■■□□□ 1.76
XRCC1-209ENST00000599693 KIAA0556O60303 1618 aa26.06■■□□□ 1.76
XRCC1-209ENST00000599693 ZCCHC11Q5TAX3 1644 aaKnown RBP26.06■■□□□ 1.76
XRCC1-209ENST00000599693 ADGRL1O94910 1474 aa26.03■■□□□ 1.76
XRCC1-209ENST00000599693 TEX14Q8IWB6 1497 aa26.01■■□□□ 1.75
XRCC1-209ENST00000599693 COL17A1Q9UMD9 1497 aaPredicted RBP26.01■■□□□ 1.75
XRCC1-209ENST00000599693 CTTNBP2Q8WZ74 1663 aa25.93■■□□□ 1.74
XRCC1-209ENST00000599693 WDR7Q9Y4E6 1490 aa25.93■■□□□ 1.74
XRCC1-209ENST00000599693 GOLGA3Q08378 1498 aa25.85■■□□□ 1.73
XRCC1-209ENST00000599693 ABCA8O94911 1581 aa25.83■■□□□ 1.73
XRCC1-209ENST00000599693 CFAP43Q8NDM7 1665 aa25.83■■□□□ 1.73
XRCC1-209ENST00000599693 MAGI3Q5TCQ9 1506 aa25.81■■□□□ 1.72
XRCC1-209ENST00000599693 HECW2Q9P2P5 1572 aa25.79■■□□□ 1.72
XRCC1-209ENST00000599693 ILDR1Q86SU0 546 aaPredicted RBP25.79■■□□□ 1.72
XRCC1-209ENST00000599693 CD109Q6YHK3 1445 aa25.79■■□□□ 1.72
XRCC1-209ENST00000599693 PRXQ9BXM0 1461 aa25.72■■□□□ 1.71
XRCC1-209ENST00000599693 KCNH8Q96L42 1107 aa25.71■■□□□ 1.71
XRCC1-209ENST00000599693 KIF21BO75037 1637 aa25.64■■□□□ 1.7
XRCC1-209ENST00000599693 ARAP3Q8WWN8 1544 aa25.62■■□□□ 1.69
XRCC1-209ENST00000599693 ATP10BO94823 1461 aa25.59■■□□□ 1.69
XRCC1-209ENST00000599693 ABCA9Q8IUA7 1624 aa25.56■■□□□ 1.68
XRCC1-209ENST00000599693 FAM9AQ8IZU1 332 aaPredicted RBP25.55■■□□□ 1.68
XRCC1-209ENST00000599693 ARID3CA6NKF2 412 aa25.54■■□□□ 1.68
XRCC1-209ENST00000599693 SAMD9Q5K651 1589 aa25.53■■□□□ 1.68
XRCC1-209ENST00000599693 P3H3Q8IVL6 736 aa25.52■■□□□ 1.68
XRCC1-209ENST00000599693 PHLDB1Q86UU1 1377 aa25.51■■□□□ 1.67
XRCC1-209ENST00000599693 RAPGEF6Q8TEU7 1601 aa25.49■■□□□ 1.67
XRCC1-209ENST00000599693 ADAMTSL3P82987 1691 aa25.46■■□□□ 1.67
XRCC1-209ENST00000599693 NEO1Q92859 1461 aa25.46■■□□□ 1.67
XRCC1-209ENST00000599693 FRMPD1Q5SYB0 1578 aa25.41■■□□□ 1.66
XRCC1-209ENST00000599693 PTPRMP28827 1452 aa25.4■■□□□ 1.66
XRCC1-209ENST00000599693 RAPGEF3O95398 923 aa25.4■■□□□ 1.66
XRCC1-209ENST00000599693 CSRNP3Q8WYN3 585 aa25.38■■□□□ 1.65
XRCC1-209ENST00000599693 NUP153P49790 1475 aaKnown RBP25.38■■□□□ 1.65
XRCC1-209ENST00000599693 BCORL1Q5H9F3 1711 aa25.37■■□□□ 1.65
XRCC1-209ENST00000599693 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.35■■□□□ 1.65
XRCC1-209ENST00000599693 HNRNPUL2Q1KMD3 747 aaKnown RBP25.35■■□□□ 1.65
XRCC1-209ENST00000599693 MADDQ8WXG6 1647 aa25.32■■□□□ 1.64
XRCC1-209ENST00000599693 ARHGEF40Q8TER5 1519 aa25.32■■□□□ 1.64
XRCC1-209ENST00000599693 FHOD3Q2V2M9 1422 aa25.3■■□□□ 1.64
XRCC1-209ENST00000599693 RICTORQ6R327 1708 aa25.28■■□□□ 1.64
XRCC1-209ENST00000599693 EEA1Q15075 1411 aa25.28■■□□□ 1.64
XRCC1-209ENST00000599693 CFAP74Q9C0B2 1584 aa25.27■■□□□ 1.64
XRCC1-209ENST00000599693 ARID4BQ4LE39 1312 aaPredicted RBP25.27■■□□□ 1.64
XRCC1-209ENST00000599693 PCF11O94913 1555 aaKnown RBP25.27■■□□□ 1.64
XRCC1-209ENST00000599693 FBXO41Q8TF61 875 aa25.26■■□□□ 1.63
XRCC1-209ENST00000599693 DENND4BO75064 1496 aaPredicted RBP25.26■■□□□ 1.63
XRCC1-209ENST00000599693 FANCAO15360 1455 aa25.22■■□□□ 1.63
XRCC1-209ENST00000599693 AKNAQ7Z591 1439 aa25.22■■□□□ 1.63
XRCC1-209ENST00000599693 PLEKHD1A6NEE1 506 aa25.22■■□□□ 1.63
XRCC1-209ENST00000599693 RANGAP1P46060 587 aaPredicted RBP25.22■■□□□ 1.63
XRCC1-209ENST00000599693 RIMS1Q86UR5 1692 aaKnown RBP25.22■■□□□ 1.63
XRCC1-209ENST00000599693 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.22■■□□□ 1.63
XRCC1-209ENST00000599693 LMTK3Q96Q04 1460 aa25.21■■□□□ 1.63
XRCC1-209ENST00000599693 EFCAB5A4FU69 1503 aa25.21■■□□□ 1.63
XRCC1-209ENST00000599693 TTC37Q6PGP7 1564 aa25.2■■□□□ 1.62
XRCC1-209ENST00000599693 ZMYM4Q5VZL5 1548 aa25.2■■□□□ 1.62
XRCC1-209ENST00000599693 ZFYVE16Q7Z3T8 1539 aa25.14■■□□□ 1.62
XRCC1-209ENST00000599693 POGZQ7Z3K3 1410 aa25.12■■□□□ 1.61
XRCC1-209ENST00000599693 SIGLEC1Q9BZZ2 1709 aa25.12■■□□□ 1.61
XRCC1-209ENST00000599693 MAGI2Q86UL8 1455 aa25.1■■□□□ 1.61
XRCC1-209ENST00000599693 CDK13Q14004 1512 aaKnown RBP25.1■■□□□ 1.61
XRCC1-209ENST00000599693 YEATS2Q9ULM3 1422 aa25.1■■□□□ 1.61
XRCC1-209ENST00000599693 HECW1Q76N89 1606 aa25.08■■□□□ 1.61
XRCC1-209ENST00000599693 FER1L4A9Z1Z3 1794 aa25.04■■□□□ 1.6
XRCC1-209ENST00000599693 PLCH2O75038 1416 aa25.03■■□□□ 1.6
XRCC1-209ENST00000599693 SCAPERQ9BY12 1400 aa25.02■■□□□ 1.6
XRCC1-209ENST00000599693 HSPA2P54652 639 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 214 ms