RNA–Protein interactions for RNA: ENST00000598165.5

XRCC1-207, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 3

Gene XRCC1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-207ENST00000598165 EEA1Q15075 1411 aa23.55■■□□□ 1.36
XRCC1-207ENST00000598165 CSRNP3Q8WYN3 585 aa23.53■■□□□ 1.36
XRCC1-207ENST00000598165 RAPGEF2Q9Y4G8 1499 aa23.53■■□□□ 1.36
XRCC1-207ENST00000598165 FAM9AQ8IZU1 332 aaPredicted RBP23.49■■□□□ 1.35
XRCC1-207ENST00000598165 PRXQ9BXM0 1461 aa23.47■■□□□ 1.35
XRCC1-207ENST00000598165 KIAA0586Q9BVV6 1533 aa23.43■■□□□ 1.34
XRCC1-207ENST00000598165 JPH4Q96JJ6 628 aa23.41■■□□□ 1.34
XRCC1-207ENST00000598165 SHROOM2Q13796 1616 aa23.37■■□□□ 1.33
XRCC1-207ENST00000598165 ERCC6L2Q5T890 1561 aa23.35■■□□□ 1.33
XRCC1-207ENST00000598165 PRG4Q92954 1404 aaPredicted RBP23.33■■□□□ 1.33
XRCC1-207ENST00000598165 IQGAP2Q13576 1575 aa23.31■■□□□ 1.32
XRCC1-207ENST00000598165 KIF21BO75037 1637 aa23.26■■□□□ 1.31
XRCC1-207ENST00000598165 CTTNBP2Q8WZ74 1663 aa23.23■■□□□ 1.31
XRCC1-207ENST00000598165 CARMIL2Q6F5E8 1435 aa23.2■■□□□ 1.3
XRCC1-207ENST00000598165 UGGT2Q9NYU1 1516 aa23.18■■□□□ 1.3
XRCC1-207ENST00000598165 AEBP2Q6ZN18 517 aaPredicted RBP23.18■■□□□ 1.3
XRCC1-207ENST00000598165 EHMT2Q96KQ7 1210 aa23.18■■□□□ 1.3
XRCC1-207ENST00000598165 GOLGA3Q08378 1498 aa23.17■■□□□ 1.3
XRCC1-207ENST00000598165 UBTFP17480 764 aaKnown RBP23.14■■□□□ 1.29
XRCC1-207ENST00000598165 DISP1Q96F81 1524 aa23.13■■□□□ 1.29
XRCC1-207ENST00000598165 TNIKQ9UKE5 1360 aa23.11■■□□□ 1.29
XRCC1-207ENST00000598165 PTPRGP23470 1445 aa23.08■■□□□ 1.29
XRCC1-207ENST00000598165 KIAA0556O60303 1618 aa23.08■■□□□ 1.29
XRCC1-207ENST00000598165 TTBK1Q5TCY1 1321 aaPredicted RBP23.08■■□□□ 1.28
XRCC1-207ENST00000598165 RANGAP1P46060 587 aaPredicted RBP23.05■■□□□ 1.28
XRCC1-207ENST00000598165 P3H3Q8IVL6 736 aa22.99■■□□□ 1.27
XRCC1-207ENST00000598165 SAMD9Q5K651 1589 aa22.97■■□□□ 1.27
XRCC1-207ENST00000598165 KIF13AQ9H1H9 1805 aa22.96■■□□□ 1.27
XRCC1-207ENST00000598165 UACAQ9BZF9 1416 aa22.92■■□□□ 1.26
XRCC1-207ENST00000598165 NPM1P06748 294 aaKnown RBP eCLIP22.92■■□□□ 1.26
XRCC1-207ENST00000598165 EFCAB5A4FU69 1503 aa22.92■■□□□ 1.26
XRCC1-207ENST00000598165 ADCY10Q96PN6 1610 aa22.91■■□□□ 1.26
XRCC1-207ENST00000598165 UHRF1BP1LA0JNW5 1464 aa22.88■■□□□ 1.25
XRCC1-207ENST00000598165 ABCC10Q5T3U5 1492 aa22.88■■□□□ 1.25
XRCC1-207ENST00000598165 FHOD3Q2V2M9 1422 aa22.88■■□□□ 1.25
XRCC1-207ENST00000598165 MAPKBP1O60336 1514 aa22.87■■□□□ 1.25
XRCC1-207ENST00000598165 FAM69CQ0P6D2 419 aa22.86■■□□□ 1.25
XRCC1-207ENST00000598165 ABCC2Q92887 1545 aa22.86■■□□□ 1.25
XRCC1-207ENST00000598165 PLB1Q6P1J6 1458 aa22.85■■□□□ 1.25
XRCC1-207ENST00000598165 DIP2BQ9P265 1576 aa22.83■■□□□ 1.25
XRCC1-207ENST00000598165 ARHGAP35Q9NRY4 1499 aa22.82■■□□□ 1.24
XRCC1-207ENST00000598165 ABCA8O94911 1581 aa22.81■■□□□ 1.24
XRCC1-207ENST00000598165 LOC105371045A0A1W2PR82 267 aa22.81■■□□□ 1.24
XRCC1-207ENST00000598165 KDM5BQ9UGL1 1544 aa22.77■■□□□ 1.24
XRCC1-207ENST00000598165 CLIP1P30622 1438 aa22.76■■□□□ 1.23
XRCC1-207ENST00000598165 FMN1Q68DA7 1419 aa22.73■■□□□ 1.23
XRCC1-207ENST00000598165 RAPGEF6Q8TEU7 1601 aa22.72■■□□□ 1.23
XRCC1-207ENST00000598165 ZCCHC11Q5TAX3 1644 aaKnown RBP22.7■■□□□ 1.22
XRCC1-207ENST00000598165 CEP162Q5TB80 1403 aa22.69■■□□□ 1.22
XRCC1-207ENST00000598165 ARID3CA6NKF2 412 aa22.69■■□□□ 1.22
XRCC1-207ENST00000598165 ASXL2Q76L83 1435 aa22.68■■□□□ 1.22
XRCC1-207ENST00000598165 KDM6BO15054 1643 aa22.68■■□□□ 1.22
XRCC1-207ENST00000598165 NUP153P49790 1475 aaKnown RBP22.66■■□□□ 1.22
XRCC1-207ENST00000598165 ATP10BO94823 1461 aa22.65■■□□□ 1.22
XRCC1-207ENST00000598165 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.64■■□□□ 1.21
XRCC1-207ENST00000598165 HNRNPUL2Q1KMD3 747 aaKnown RBP22.64■■□□□ 1.21
XRCC1-207ENST00000598165 ATP1B4Q9UN42 357 aaPredicted RBP22.63■■□□□ 1.21
XRCC1-207ENST00000598165 TSPOAP1O95153 1857 aa22.6■■□□□ 1.21
XRCC1-207ENST00000598165 WDR7Q9Y4E6 1490 aa22.6■■□□□ 1.21
XRCC1-207ENST00000598165 KDM4FA0A1W2PPD8 638 aa22.58■■□□□ 1.21
XRCC1-207ENST00000598165 HECW1Q76N89 1606 aa22.57■■□□□ 1.2
XRCC1-207ENST00000598165 CASKIN1Q8WXD9 1431 aa22.56■■□□□ 1.2
XRCC1-207ENST00000598165 EPRSP07814 1512 aaKnown RBP22.55■■□□□ 1.2
XRCC1-207ENST00000598165 KCNH8Q96L42 1107 aa22.54■■□□□ 1.2
XRCC1-207ENST00000598165 PCF11O94913 1555 aaKnown RBP22.52■■□□□ 1.2
XRCC1-207ENST00000598165 PLEKHD1A6NEE1 506 aa22.52■■□□□ 1.2
XRCC1-207ENST00000598165 CDK13Q14004 1512 aaKnown RBP22.51■■□□□ 1.19
XRCC1-207ENST00000598165 GLI2P10070 1586 aa22.5■■□□□ 1.19
XRCC1-207ENST00000598165 FYCO1Q9BQS8 1478 aa22.5■■□□□ 1.19
XRCC1-207ENST00000598165 PPRC1Q5VV67 1664 aaKnown RBP22.49■■□□□ 1.19
XRCC1-207ENST00000598165 CDK11AQ9UQ88 783 aaPredicted RBP22.47■■□□□ 1.19
XRCC1-207ENST00000598165 CCDC18Q5T9S5 1454 aa22.45■■□□□ 1.18
XRCC1-207ENST00000598165 VPS8Q8N3P4 1428 aa22.41■■□□□ 1.18
XRCC1-207ENST00000598165 LRRIQ1Q96JM4 1722 aa22.4■■□□□ 1.18
XRCC1-207ENST00000598165 MAP3K4Q9Y6R4 1608 aa22.39■■□□□ 1.18
XRCC1-207ENST00000598165 COL17A1Q9UMD9 1497 aaPredicted RBP22.39■■□□□ 1.17
XRCC1-207ENST00000598165 CD109Q6YHK3 1445 aa22.39■■□□□ 1.17
XRCC1-207ENST00000598165 ADGRL1O94910 1474 aa22.37■■□□□ 1.17
XRCC1-207ENST00000598165 CFAP43Q8NDM7 1665 aa22.36■■□□□ 1.17
XRCC1-207ENST00000598165 TROQ12816 1431 aaPredicted RBP22.35■■□□□ 1.17
XRCC1-207ENST00000598165 ABCA9Q8IUA7 1624 aa22.35■■□□□ 1.17
XRCC1-207ENST00000598165 TEX14Q8IWB6 1497 aa22.33■■□□□ 1.16
XRCC1-207ENST00000598165 MAGI3Q5TCQ9 1506 aa22.31■■□□□ 1.16
XRCC1-207ENST00000598165 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.3■■□□□ 1.16
XRCC1-207ENST00000598165 KIF14Q15058 1648 aa22.27■■□□□ 1.16
XRCC1-207ENST00000598165 MTUS2Q5JR59 1369 aa22.25■■□□□ 1.15
XRCC1-207ENST00000598165 TTC37Q6PGP7 1564 aa22.25■■□□□ 1.15
XRCC1-207ENST00000598165 APLP2Q06481 763 aa22.21■■□□□ 1.15
XRCC1-207ENST00000598165 TIAM1Q13009 1591 aa22.21■■□□□ 1.15
XRCC1-207ENST00000598165 PLCH2O75038 1416 aa22.19■■□□□ 1.14
XRCC1-207ENST00000598165 EHBP1L1Q8N3D4 1523 aa22.19■■□□□ 1.14
XRCC1-207ENST00000598165 MAP3K1Q13233 1512 aa22.18■■□□□ 1.14
XRCC1-207ENST00000598165 PHLDB1Q86UU1 1377 aa22.18■■□□□ 1.14
XRCC1-207ENST00000598165 NEO1Q92859 1461 aa22.17■■□□□ 1.14
XRCC1-207ENST00000598165 ILDR1Q86SU0 546 aaPredicted RBP22.16■■□□□ 1.14
XRCC1-207ENST00000598165 FANCAO15360 1455 aa22.15■■□□□ 1.14
XRCC1-207ENST00000598165 MYO5CQ9NQX4 1742 aa22.14■■□□□ 1.14
XRCC1-207ENST00000598165 HECW2Q9P2P5 1572 aa22.14■■□□□ 1.13
XRCC1-207ENST00000598165 EFCAB2Q5VUJ9 269 aa22.14■■□□□ 1.13
XRCC1-207ENST00000598165 ARAP3Q8WWN8 1544 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms