RNA–Protein interactions for RNA: ENST00000598165.5

XRCC1-207, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 3

Gene XRCC1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-207ENST00000598165 NISCHQ9Y2I1 1504 aa33.89■■■■□ 3.02
XRCC1-207ENST00000598165 CCDC180Q9P1Z9 1646 aa30.02■■■□□ 2.4
XRCC1-207ENST00000598165 ABCC9O60706 1549 aa29.74■■■□□ 2.35
XRCC1-207ENST00000598165 DCAF8L2P0C7V8 631 aa28.33■■■□□ 2.13
XRCC1-207ENST00000598165 ZCCHC6Q5VYS8 1495 aaKnown RBP28.26■■■□□ 2.11
XRCC1-207ENST00000598165 NACADO15069 1562 aa28.22■■■□□ 2.11
XRCC1-207ENST00000598165 RB1CC1Q8TDY2 1594 aa28.21■■■□□ 2.11
XRCC1-207ENST00000598165 DNAJC5BQ9UF47 199 aa28.1■■■□□ 2.09
XRCC1-207ENST00000598165 MYO15BQ96JP2 1530 aa28.09■■■□□ 2.09
XRCC1-207ENST00000598165 DCAF1Q9Y4B6 1507 aa28.03■■■□□ 2.08
XRCC1-207ENST00000598165 PABPN1Q86U42 306 aaKnown RBP eCLIP27.64■■■□□ 2.02
XRCC1-207ENST00000598165 UNC13AQ9UPW8 1703 aa27.5■■□□□ 1.99
XRCC1-207ENST00000598165 SCRIBQ14160 1630 aa27.43■■□□□ 1.98
XRCC1-207ENST00000598165 BICRAQ9NZM4 1560 aa27.37■■□□□ 1.97
XRCC1-207ENST00000598165 SHROOM4Q9ULL8 1493 aa27.08■■□□□ 1.93
XRCC1-207ENST00000598165 CC2D2AQ9P2K1 1620 aa26.82■■□□□ 1.88
XRCC1-207ENST00000598165 CECR2Q9BXF3 1484 aa26.81■■□□□ 1.88
XRCC1-207ENST00000598165 EIF4G1Q04637 1599 aaKnown RBP26.71■■□□□ 1.87
XRCC1-207ENST00000598165 BAZ1AQ9NRL2 1556 aaPredicted RBP26.26■■□□□ 1.79
XRCC1-207ENST00000598165 SMARCA4P51532 1647 aa26.24■■□□□ 1.79
XRCC1-207ENST00000598165 MROH2BQ7Z745 1585 aa26.12■■□□□ 1.77
XRCC1-207ENST00000598165 ATAD2BQ9ULI0 1458 aa26.09■■□□□ 1.77
XRCC1-207ENST00000598165 SMARCA2P51531 1590 aa26.06■■□□□ 1.76
XRCC1-207ENST00000598165 NCAPD3P42695 1498 aa26.04■■□□□ 1.76
XRCC1-207ENST00000598165 PEG3Q9GZU2 1588 aa25.98■■□□□ 1.75
XRCC1-207ENST00000598165 DNAJC5Q9H3Z4 198 aa25.93■■□□□ 1.74
XRCC1-207ENST00000598165 HMGXB3Q12766 1538 aa25.92■■□□□ 1.74
XRCC1-207ENST00000598165 RSF1Q96T23 1441 aaPredicted RBP25.89■■□□□ 1.74
XRCC1-207ENST00000598165 BAZ1BQ9UIG0 1483 aaKnown RBP25.89■■□□□ 1.73
XRCC1-207ENST00000598165 WIZO95785 1651 aa25.83■■□□□ 1.73
XRCC1-207ENST00000598165 CUX2O14529 1486 aa25.69■■□□□ 1.7
XRCC1-207ENST00000598165 ERCC6Q03468 1493 aa25.68■■□□□ 1.7
XRCC1-207ENST00000598165 TOP2AP11388 1531 aaKnown RBP25.58■■□□□ 1.68
XRCC1-207ENST00000598165 NESP48681 1621 aa25.48■■□□□ 1.67
XRCC1-207ENST00000598165 SUPT5HO00267 1087 aaKnown RBP25.41■■□□□ 1.66
XRCC1-207ENST00000598165 LAMC3Q9Y6N6 1575 aa25.32■■□□□ 1.64
XRCC1-207ENST00000598165 CADPSQ9ULU8 1353 aa25.31■■□□□ 1.64
XRCC1-207ENST00000598165 CCDC88BA6NC98 1476 aa25.29■■□□□ 1.64
XRCC1-207ENST00000598165 THOC2Q8NI27 1593 aaKnown RBP25.27■■□□□ 1.64
XRCC1-207ENST00000598165 PDS5BQ9NTI5 1447 aa25.19■■□□□ 1.62
XRCC1-207ENST00000598165 CFTRP13569 1480 aa25.18■■□□□ 1.62
XRCC1-207ENST00000598165 KIF21AQ7Z4S6 1674 aa25.09■■□□□ 1.61
XRCC1-207ENST00000598165 FANCD2Q9BXW9 1451 aa25.02■■□□□ 1.6
XRCC1-207ENST00000598165 CEP164Q9UPV0 1460 aa24.97■■□□□ 1.59
XRCC1-207ENST00000598165 PRDM2Q13029 1718 aa24.93■■□□□ 1.58
XRCC1-207ENST00000598165 MRC2Q9UBG0 1479 aa24.92■■□□□ 1.58
XRCC1-207ENST00000598165 WDR62O43379 1518 aa24.86■■□□□ 1.57
XRCC1-207ENST00000598165 TRIM41Q8WV44 630 aa24.74■■□□□ 1.55
XRCC1-207ENST00000598165 URB2Q14146 1524 aaKnown RBP24.74■■□□□ 1.55
XRCC1-207ENST00000598165 ABCC8Q09428 1581 aa24.65■■□□□ 1.54
XRCC1-207ENST00000598165 TOPBP1Q92547 1522 aa24.62■■□□□ 1.53
XRCC1-207ENST00000598165 DNMBPQ6XZF7 1577 aa24.6■■□□□ 1.53
XRCC1-207ENST00000598165 CUX1P39880 1505 aa24.49■■□□□ 1.51
XRCC1-207ENST00000598165 IFT140Q96RY7 1462 aa24.45■■□□□ 1.5
XRCC1-207ENST00000598165 OSCARQ8IYS5 282 aa24.43■■□□□ 1.5
XRCC1-207ENST00000598165 POLA1P09884 1462 aaPredicted RBP24.43■■□□□ 1.5
XRCC1-207ENST00000598165 WRNQ14191 1432 aaPredicted RBP eCLIP24.43■■□□□ 1.5
XRCC1-207ENST00000598165 FGD5Q6ZNL6 1462 aa24.39■■□□□ 1.5
XRCC1-207ENST00000598165 SOGA1O94964 1423 aa24.35■■□□□ 1.49
XRCC1-207ENST00000598165 RAD54L2Q9Y4B4 1467 aa24.33■■□□□ 1.49
XRCC1-207ENST00000598165 SYNJ1O43426 1573 aa24.32■■□□□ 1.48
XRCC1-207ENST00000598165 TOP2BQ02880 1626 aa24.32■■□□□ 1.48
XRCC1-207ENST00000598165 TARBP1Q13395 1621 aaKnown RBP24.32■■□□□ 1.48
XRCC1-207ENST00000598165 ZNF608Q9ULD9 1512 aaPredicted RBP24.3■■□□□ 1.48
XRCC1-207ENST00000598165 BIVM-ERCC5R4GMW8 1640 aa24.29■■□□□ 1.48
XRCC1-207ENST00000598165 AQRO60306 1485 aaKnown RBP eCLIP24.2■■□□□ 1.476e-6■■■■□ 25.1
XRCC1-207ENST00000598165 TDRD9Q8NDG6 1382 aaKnown RBP24.2■■□□□ 1.46
XRCC1-207ENST00000598165 EIF4G3O43432 1585 aaKnown RBP24.2■■□□□ 1.46
XRCC1-207ENST00000598165 RIMBP3CA6NJZ7 1639 aa24.19■■□□□ 1.46
XRCC1-207ENST00000598165 RIMBP3BA6NNM3 1639 aa24.19■■□□□ 1.46
XRCC1-207ENST00000598165 RIMBP3Q9UFD9 1639 aa24.19■■□□□ 1.46
XRCC1-207ENST00000598165 ABCA10Q8WWZ4 1543 aa24.16■■□□□ 1.46
XRCC1-207ENST00000598165 WDR97A6NE52 1622 aa24.14■■□□□ 1.46
XRCC1-207ENST00000598165 ARHGEF11O15085 1522 aa24.11■■□□□ 1.45
XRCC1-207ENST00000598165 GAPVD1Q14C86 1478 aa24.07■■□□□ 1.44
XRCC1-207ENST00000598165 GRIN2BQ13224 1484 aa24.04■■□□□ 1.44
XRCC1-207ENST00000598165 ABCA5Q8WWZ7 1642 aa24.02■■□□□ 1.44
XRCC1-207ENST00000598165 SNAPC4Q5SXM2 1469 aa23.98■■□□□ 1.43
XRCC1-207ENST00000598165 MAGI1Q96QZ7 1491 aaPredicted RBP23.95■■□□□ 1.42
XRCC1-207ENST00000598165 PBRM1Q86U86 1689 aa23.95■■□□□ 1.42
XRCC1-207ENST00000598165 CHD1O14646 1710 aa23.94■■□□□ 1.42
XRCC1-207ENST00000598165 FBLN2P98095 1184 aa23.93■■□□□ 1.42
XRCC1-207ENST00000598165 CYB5RLQ6IPT4 315 aa23.91■■□□□ 1.42
XRCC1-207ENST00000598165 KIF27Q86VH2 1401 aa23.91■■□□□ 1.42
XRCC1-207ENST00000598165 ARAP1Q96P48 1450 aa23.88■■□□□ 1.41
XRCC1-207ENST00000598165 CHMP7Q8WUX9 453 aaPredicted RBP23.88■■□□□ 1.41
XRCC1-207ENST00000598165 ERICH3Q5RHP9 1530 aa23.88■■□□□ 1.41
XRCC1-207ENST00000598165 SYNJ2O15056 1496 aa23.86■■□□□ 1.41
XRCC1-207ENST00000598165 FHAD1B1AJZ9 1412 aa23.8■■□□□ 1.4
XRCC1-207ENST00000598165 ADAMTS12P58397 1594 aa23.79■■□□□ 1.4
XRCC1-207ENST00000598165 CHIC1Q5VXU3 224 aa23.79■■□□□ 1.4
XRCC1-207ENST00000598165 IGF1RP08069 1367 aa23.78■■□□□ 1.4
XRCC1-207ENST00000598165 TRHP20396 242 aaPredicted RBP23.72■■□□□ 1.39
XRCC1-207ENST00000598165 GRIN2AQ12879 1464 aa23.72■■□□□ 1.39
XRCC1-207ENST00000598165 CLASP1Q7Z460 1538 aa23.72■■□□□ 1.39
XRCC1-207ENST00000598165 RUSC2Q8N2Y8 1516 aa23.71■■□□□ 1.39
XRCC1-207ENST00000598165 CUL7Q14999 1698 aa23.67■■□□□ 1.38
XRCC1-207ENST00000598165 CARMIL1Q5VZK9 1371 aa23.65■■□□□ 1.38
XRCC1-207ENST00000598165 NUP160Q12769 1436 aa23.6■■□□□ 1.37
XRCC1-207ENST00000598165 CEP170Q5SW79 1584 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms