RNA–Protein interactions for RNA: ENST00000597507.1

C19orf54-207, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 2

Gene C19orf54, Length 947 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-207ENST00000597507 FAM69CQ0P6D2 419 aa29.52■■■□□ 2.32
C19orf54-207ENST00000597507 ABCC10Q5T3U5 1492 aa29.48■■■□□ 2.31
C19orf54-207ENST00000597507 NPM1P06748 294 aaKnown RBP eCLIP29.44■■■□□ 2.3
C19orf54-207ENST00000597507 RUSC2Q8N2Y8 1516 aa29.42■■■□□ 2.3
C19orf54-207ENST00000597507 MAPKBP1O60336 1514 aa29.4■■■□□ 2.3
C19orf54-207ENST00000597507 DIP2BQ9P265 1576 aa29.38■■■□□ 2.29
C19orf54-207ENST00000597507 ADCY10Q96PN6 1610 aa29.37■■■□□ 2.29
C19orf54-207ENST00000597507 KDM4FA0A1W2PPD8 638 aa29.34■■■□□ 2.29
C19orf54-207ENST00000597507 TSPOAP1O95153 1857 aa29.27■■■□□ 2.28
C19orf54-207ENST00000597507 KDM6BO15054 1643 aa29.27■■■□□ 2.28
C19orf54-207ENST00000597507 KIAA0586Q9BVV6 1533 aa29.24■■■□□ 2.27
C19orf54-207ENST00000597507 IGF1RP08069 1367 aa29.19■■■□□ 2.26
C19orf54-207ENST00000597507 PTPRGP23470 1445 aa29.1■■■□□ 2.25
C19orf54-207ENST00000597507 TTBK1Q5TCY1 1321 aaPredicted RBP29.08■■■□□ 2.25
C19orf54-207ENST00000597507 CUL7Q14999 1698 aa29.06■■■□□ 2.24
C19orf54-207ENST00000597507 KIF27Q86VH2 1401 aa29.05■■■□□ 2.24
C19orf54-207ENST00000597507 ILDR1Q86SU0 546 aaPredicted RBP29.02■■■□□ 2.24
C19orf54-207ENST00000597507 ABCC2Q92887 1545 aa28.99■■■□□ 2.23
C19orf54-207ENST00000597507 PPRC1Q5VV67 1664 aaKnown RBP28.98■■■□□ 2.23
C19orf54-207ENST00000597507 ASXL2Q76L83 1435 aa28.97■■■□□ 2.23
C19orf54-207ENST00000597507 TNIKQ9UKE5 1360 aa28.97■■■□□ 2.23
C19orf54-207ENST00000597507 CARMIL1Q5VZK9 1371 aa28.95■■■□□ 2.22
C19orf54-207ENST00000597507 CARMIL2Q6F5E8 1435 aa28.94■■■□□ 2.22
C19orf54-207ENST00000597507 GLI2P10070 1586 aa28.93■■■□□ 2.22
C19orf54-207ENST00000597507 PLB1Q6P1J6 1458 aa28.92■■■□□ 2.22
C19orf54-207ENST00000597507 ADGRL1O94910 1474 aa28.88■■■□□ 2.21
C19orf54-207ENST00000597507 COL17A1Q9UMD9 1497 aaPredicted RBP28.88■■■□□ 2.21
C19orf54-207ENST00000597507 UHRF1BP1LA0JNW5 1464 aa28.87■■■□□ 2.21
C19orf54-207ENST00000597507 IQGAP2Q13576 1575 aa28.85■■■□□ 2.21
C19orf54-207ENST00000597507 UACAQ9BZF9 1416 aa28.84■■■□□ 2.21
C19orf54-207ENST00000597507 DISP1Q96F81 1524 aa28.8■■■□□ 2.2
C19orf54-207ENST00000597507 EPRSP07814 1512 aaKnown RBP28.79■■■□□ 2.2
C19orf54-207ENST00000597507 MAP3K4Q9Y6R4 1608 aa28.76■■■□□ 2.2
C19orf54-207ENST00000597507 KDM5BQ9UGL1 1544 aa28.76■■■□□ 2.19
C19orf54-207ENST00000597507 ZCCHC11Q5TAX3 1644 aaKnown RBP28.69■■■□□ 2.18
C19orf54-207ENST00000597507 TEX14Q8IWB6 1497 aa28.68■■■□□ 2.18
C19orf54-207ENST00000597507 HECW2Q9P2P5 1572 aa28.67■■■□□ 2.18
C19orf54-207ENST00000597507 UGGT2Q9NYU1 1516 aa28.66■■■□□ 2.18
C19orf54-207ENST00000597507 KIAA0556O60303 1618 aa28.6■■■□□ 2.17
C19orf54-207ENST00000597507 RAPGEF2Q9Y4G8 1499 aa28.59■■■□□ 2.17
C19orf54-207ENST00000597507 WDR7Q9Y4E6 1490 aa28.57■■■□□ 2.16
C19orf54-207ENST00000597507 KCNH8Q96L42 1107 aa28.49■■■□□ 2.15
C19orf54-207ENST00000597507 CD109Q6YHK3 1445 aa28.49■■■□□ 2.15
C19orf54-207ENST00000597507 MAGI3Q5TCQ9 1506 aa28.47■■■□□ 2.15
C19orf54-207ENST00000597507 CFAP43Q8NDM7 1665 aa28.44■■■□□ 2.14
C19orf54-207ENST00000597507 ABCA8O94911 1581 aa28.4■■■□□ 2.14
C19orf54-207ENST00000597507 CTTNBP2Q8WZ74 1663 aa28.38■■■□□ 2.13
C19orf54-207ENST00000597507 KIF21BO75037 1637 aa28.36■■■□□ 2.13
C19orf54-207ENST00000597507 GOLGA3Q08378 1498 aa28.34■■■□□ 2.13
C19orf54-207ENST00000597507 ARAP3Q8WWN8 1544 aa28.28■■■□□ 2.12
C19orf54-207ENST00000597507 ARID3CA6NKF2 412 aa28.25■■■□□ 2.11
C19orf54-207ENST00000597507 FBXO41Q8TF61 875 aa28.23■■■□□ 2.11
C19orf54-207ENST00000597507 ATP10BO94823 1461 aa28.2■■■□□ 2.1
C19orf54-207ENST00000597507 ADAMTSL3P82987 1691 aa28.17■■■□□ 2.1
C19orf54-207ENST00000597507 PTPRMP28827 1452 aa28.17■■■□□ 2.1
C19orf54-207ENST00000597507 PRXQ9BXM0 1461 aa28.17■■■□□ 2.1
C19orf54-207ENST00000597507 P3H3Q8IVL6 736 aa28.17■■■□□ 2.1
C19orf54-207ENST00000597507 RAPGEF3O95398 923 aa28.15■■■□□ 2.1
C19orf54-207ENST00000597507 ABCA9Q8IUA7 1624 aa28.13■■■□□ 2.09
C19orf54-207ENST00000597507 PHLDB1Q86UU1 1377 aa28.11■■■□□ 2.09
C19orf54-207ENST00000597507 FAM9AQ8IZU1 332 aaPredicted RBP28.08■■■□□ 2.09
C19orf54-207ENST00000597507 BCORL1Q5H9F3 1711 aa28.04■■■□□ 2.08
C19orf54-207ENST00000597507 NEO1Q92859 1461 aa28.03■■■□□ 2.08
C19orf54-207ENST00000597507 ARID4BQ4LE39 1312 aaPredicted RBP28.01■■■□□ 2.07
C19orf54-207ENST00000597507 FRMPD1Q5SYB0 1578 aa28.01■■■□□ 2.07
C19orf54-207ENST00000597507 MADDQ8WXG6 1647 aa28■■■□□ 2.07
C19orf54-207ENST00000597507 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.98■■■□□ 2.07
C19orf54-207ENST00000597507 HNRNPUL2Q1KMD3 747 aaKnown RBP27.98■■■□□ 2.07
C19orf54-207ENST00000597507 PCF11O94913 1555 aaKnown RBP27.98■■■□□ 2.07
C19orf54-207ENST00000597507 LMTK3Q96Q04 1460 aa27.97■■■□□ 2.07
C19orf54-207ENST00000597507 RAPGEF6Q8TEU7 1601 aa27.96■■■□□ 2.07
C19orf54-207ENST00000597507 SAMD9Q5K651 1589 aa27.95■■■□□ 2.07
C19orf54-207ENST00000597507 NUP153P49790 1475 aaKnown RBP27.89■■■□□ 2.06
C19orf54-207ENST00000597507 RIMS1Q86UR5 1692 aaKnown RBP27.89■■■□□ 2.06
C19orf54-207ENST00000597507 HSPA2P54652 639 aa27.86■■■□□ 2.05
C19orf54-207ENST00000597507 RICTORQ6R327 1708 aa27.85■■■□□ 2.05
C19orf54-207ENST00000597507 ARHGEF40Q8TER5 1519 aa27.85■■■□□ 2.05
C19orf54-207ENST00000597507 DENND4BO75064 1496 aaPredicted RBP27.84■■■□□ 2.05
C19orf54-207ENST00000597507 CSRNP3Q8WYN3 585 aa27.84■■■□□ 2.05
C19orf54-207ENST00000597507 AKNAQ7Z591 1439 aa27.83■■■□□ 2.05
C19orf54-207ENST00000597507 PLEKHD1A6NEE1 506 aa27.81■■■□□ 2.04
C19orf54-207ENST00000597507 RANGAP1P46060 587 aaPredicted RBP27.81■■■□□ 2.04
C19orf54-207ENST00000597507 PLPPR3Q6T4P5 718 aa27.81■■■□□ 2.04
C19orf54-207ENST00000597507 FHOD3Q2V2M9 1422 aa27.8■■■□□ 2.04
C19orf54-207ENST00000597507 SIGLEC1Q9BZZ2 1709 aa27.78■■■□□ 2.04
C19orf54-207ENST00000597507 FANCAO15360 1455 aa27.77■■■□□ 2.04
C19orf54-207ENST00000597507 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.74■■■□□ 2.03
C19orf54-207ENST00000597507 YEATS2Q9ULM3 1422 aa27.74■■■□□ 2.03
C19orf54-207ENST00000597507 POGZQ7Z3K3 1410 aa27.72■■■□□ 2.03
C19orf54-207ENST00000597507 ZMYM4Q5VZL5 1548 aa27.71■■■□□ 2.03
C19orf54-207ENST00000597507 CFAP74Q9C0B2 1584 aa27.7■■■□□ 2.03
C19orf54-207ENST00000597507 CERKQ8TCT0 537 aa27.7■■■□□ 2.02
C19orf54-207ENST00000597507 TTC37Q6PGP7 1564 aa27.69■■■□□ 2.02
C19orf54-207ENST00000597507 ZFYVE16Q7Z3T8 1539 aa27.69■■■□□ 2.02
C19orf54-207ENST00000597507 MLECQ14165 292 aa27.69■■■□□ 2.02
C19orf54-207ENST00000597507 EFCAB5A4FU69 1503 aa27.66■■■□□ 2.02
C19orf54-207ENST00000597507 HECW1Q76N89 1606 aa27.64■■■□□ 2.02
C19orf54-207ENST00000597507 MAGI2Q86UL8 1455 aa27.64■■■□□ 2.01
C19orf54-207ENST00000597507 FER1L4A9Z1Z3 1794 aa27.63■■■□□ 2.01
C19orf54-207ENST00000597507 SCAPERQ9BY12 1400 aa27.59■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms