RNA–Protein interactions for RNA: ENST00000597400.5

ZNF548-207, Transcript of zinc finger protein 548, humanhuman

TSL 3 BASIC

Gene ZNF548, Length 589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-207ENST00000597400 ADCY10Q96PN6 1610 aa19.96■□□□□ 0.79
ZNF548-207ENST00000597400 ABCC10Q5T3U5 1492 aa19.93■□□□□ 0.78
ZNF548-207ENST00000597400 MAPKBP1O60336 1514 aa19.93■□□□□ 0.78
ZNF548-207ENST00000597400 TSPOAP1O95153 1857 aa19.89■□□□□ 0.77
ZNF548-207ENST00000597400 JPH4Q96JJ6 628 aa19.87■□□□□ 0.77
ZNF548-207ENST00000597400 KDM6BO15054 1643 aa19.87■□□□□ 0.77
ZNF548-207ENST00000597400 SUPT5HO00267 1087 aaKnown RBP19.84■□□□□ 0.77
ZNF548-207ENST00000597400 FAM69CQ0P6D2 419 aa19.84■□□□□ 0.77
ZNF548-207ENST00000597400 KDM4FA0A1W2PPD8 638 aa19.78■□□□□ 0.76
ZNF548-207ENST00000597400 PPRC1Q5VV67 1664 aaKnown RBP19.75■□□□□ 0.75
ZNF548-207ENST00000597400 KIAA0586Q9BVV6 1533 aa19.72■□□□□ 0.75
ZNF548-207ENST00000597400 CUL7Q14999 1698 aa19.72■□□□□ 0.75
ZNF548-207ENST00000597400 NPM1P06748 294 aaKnown RBP eCLIP19.7■□□□□ 0.74
ZNF548-207ENST00000597400 IGF1RP08069 1367 aa19.63■□□□□ 0.73
ZNF548-207ENST00000597400 GLI2P10070 1586 aa19.6■□□□□ 0.73
ZNF548-207ENST00000597400 ABCC2Q92887 1545 aa19.6■□□□□ 0.73
ZNF548-207ENST00000597400 ADGRL1O94910 1474 aa19.57■□□□□ 0.72
ZNF548-207ENST00000597400 PTPRGP23470 1445 aa19.57■□□□□ 0.72
ZNF548-207ENST00000597400 ASXL2Q76L83 1435 aa19.57■□□□□ 0.72
ZNF548-207ENST00000597400 KIF27Q86VH2 1401 aa19.57■□□□□ 0.72
ZNF548-207ENST00000597400 ILDR1Q86SU0 546 aaPredicted RBP19.56■□□□□ 0.72
ZNF548-207ENST00000597400 MAP3K4Q9Y6R4 1608 aa19.55■□□□□ 0.72
ZNF548-207ENST00000597400 IQGAP2Q13576 1575 aa19.55■□□□□ 0.72
ZNF548-207ENST00000597400 COL17A1Q9UMD9 1497 aaPredicted RBP19.54■□□□□ 0.72
ZNF548-207ENST00000597400 TTBK1Q5TCY1 1321 aaPredicted RBP19.52■□□□□ 0.72
ZNF548-207ENST00000597400 TNIKQ9UKE5 1360 aa19.51■□□□□ 0.71
ZNF548-207ENST00000597400 UHRF1BP1LA0JNW5 1464 aa19.51■□□□□ 0.71
ZNF548-207ENST00000597400 PLB1Q6P1J6 1458 aa19.51■□□□□ 0.71
ZNF548-207ENST00000597400 ZCCHC11Q5TAX3 1644 aaKnown RBP19.5■□□□□ 0.71
ZNF548-207ENST00000597400 DISP1Q96F81 1524 aa19.5■□□□□ 0.71
ZNF548-207ENST00000597400 HECW2Q9P2P5 1572 aa19.49■□□□□ 0.71
ZNF548-207ENST00000597400 CARMIL1Q5VZK9 1371 aa19.47■□□□□ 0.71
ZNF548-207ENST00000597400 EPRSP07814 1512 aaKnown RBP19.47■□□□□ 0.71
ZNF548-207ENST00000597400 CARMIL2Q6F5E8 1435 aa19.47■□□□□ 0.71
ZNF548-207ENST00000597400 KDM5BQ9UGL1 1544 aa19.46■□□□□ 0.71
ZNF548-207ENST00000597400 UACAQ9BZF9 1416 aa19.44■□□□□ 0.7
ZNF548-207ENST00000597400 KIAA0556O60303 1618 aa19.42■□□□□ 0.7
ZNF548-207ENST00000597400 UGGT2Q9NYU1 1516 aa19.4■□□□□ 0.7
ZNF548-207ENST00000597400 TEX14Q8IWB6 1497 aa19.37■□□□□ 0.69
ZNF548-207ENST00000597400 CTTNBP2Q8WZ74 1663 aa19.33■□□□□ 0.68
ZNF548-207ENST00000597400 WDR7Q9Y4E6 1490 aa19.32■□□□□ 0.68
ZNF548-207ENST00000597400 CFAP43Q8NDM7 1665 aa19.32■□□□□ 0.68
ZNF548-207ENST00000597400 KIF21BO75037 1637 aa19.3■□□□□ 0.68
ZNF548-207ENST00000597400 RAPGEF2Q9Y4G8 1499 aa19.28■□□□□ 0.68
ZNF548-207ENST00000597400 ABCA8O94911 1581 aa19.25■□□□□ 0.67
ZNF548-207ENST00000597400 MAGI3Q5TCQ9 1506 aa19.24■□□□□ 0.67
ZNF548-207ENST00000597400 CD109Q6YHK3 1445 aa19.19■□□□□ 0.66
ZNF548-207ENST00000597400 ADAMTSL3P82987 1691 aa19.14■□□□□ 0.65
ZNF548-207ENST00000597400 ARAP3Q8WWN8 1544 aa19.1■□□□□ 0.65
ZNF548-207ENST00000597400 GOLGA3Q08378 1498 aa19.1■□□□□ 0.65
ZNF548-207ENST00000597400 KCNH8Q96L42 1107 aa19.1■□□□□ 0.65
ZNF548-207ENST00000597400 ABCA9Q8IUA7 1624 aa19.09■□□□□ 0.65
ZNF548-207ENST00000597400 FRMPD1Q5SYB0 1578 aa19.07■□□□□ 0.64
ZNF548-207ENST00000597400 PTPRMP28827 1452 aa19.05■□□□□ 0.64
ZNF548-207ENST00000597400 BCORL1Q5H9F3 1711 aa19.05■□□□□ 0.64
ZNF548-207ENST00000597400 MADDQ8WXG6 1647 aa19.04■□□□□ 0.64
ZNF548-207ENST00000597400 ATP10BO94823 1461 aa19.03■□□□□ 0.64
ZNF548-207ENST00000597400 PRXQ9BXM0 1461 aa19.02■□□□□ 0.63
ZNF548-207ENST00000597400 FBXO41Q8TF61 875 aa19■□□□□ 0.63
ZNF548-207ENST00000597400 ARID3CA6NKF2 412 aa18.99■□□□□ 0.63
ZNF548-207ENST00000597400 PCF11O94913 1555 aaKnown RBP18.98■□□□□ 0.63
ZNF548-207ENST00000597400 SAMD9Q5K651 1589 aa18.98■□□□□ 0.63
ZNF548-207ENST00000597400 LMTK3Q96Q04 1460 aa18.97■□□□□ 0.63
ZNF548-207ENST00000597400 RAPGEF6Q8TEU7 1601 aa18.96■□□□□ 0.63
ZNF548-207ENST00000597400 RIMS1Q86UR5 1692 aaKnown RBP18.96■□□□□ 0.63
ZNF548-207ENST00000597400 SIGLEC1Q9BZZ2 1709 aa18.96■□□□□ 0.63
ZNF548-207ENST00000597400 RICTORQ6R327 1708 aa18.95■□□□□ 0.62
ZNF548-207ENST00000597400 ARHGEF40Q8TER5 1519 aa18.94■□□□□ 0.62
ZNF548-207ENST00000597400 NEO1Q92859 1461 aa18.93■□□□□ 0.62
ZNF548-207ENST00000597400 RAPGEF3O95398 923 aa18.93■□□□□ 0.62
ZNF548-207ENST00000597400 P3H3Q8IVL6 736 aa18.9■□□□□ 0.62
ZNF548-207ENST00000597400 PHLDB1Q86UU1 1377 aa18.89■□□□□ 0.61
ZNF548-207ENST00000597400 NUP153P49790 1475 aaKnown RBP18.87■□□□□ 0.61
ZNF548-207ENST00000597400 TTC37Q6PGP7 1564 aa18.82■□□□□ 0.6
ZNF548-207ENST00000597400 FER1L4A9Z1Z3 1794 aa18.81■□□□□ 0.6
ZNF548-207ENST00000597400 CFAP74Q9C0B2 1584 aa18.81■□□□□ 0.6
ZNF548-207ENST00000597400 ZMYM4Q5VZL5 1548 aa18.8■□□□□ 0.6
ZNF548-207ENST00000597400 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.79■□□□□ 0.6
ZNF548-207ENST00000597400 ARID4BQ4LE39 1312 aaPredicted RBP18.78■□□□□ 0.6
ZNF548-207ENST00000597400 DENND4BO75064 1496 aaPredicted RBP18.77■□□□□ 0.6
ZNF548-207ENST00000597400 FHOD3Q2V2M9 1422 aa18.76■□□□□ 0.59
ZNF548-207ENST00000597400 HSPA2P54652 639 aa18.76■□□□□ 0.59
ZNF548-207ENST00000597400 FANCAO15360 1455 aa18.76■□□□□ 0.59
ZNF548-207ENST00000597400 AKNAQ7Z591 1439 aa18.75■□□□□ 0.59
ZNF548-207ENST00000597400 YEATS2Q9ULM3 1422 aa18.75■□□□□ 0.59
ZNF548-207ENST00000597400 ZFYVE16Q7Z3T8 1539 aa18.75■□□□□ 0.59
ZNF548-207ENST00000597400 HECW1Q76N89 1606 aa18.74■□□□□ 0.59
ZNF548-207ENST00000597400 EFCAB5A4FU69 1503 aa18.73■□□□□ 0.59
ZNF548-207ENST00000597400 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.72■□□□□ 0.59
ZNF548-207ENST00000597400 HNRNPUL2Q1KMD3 747 aaKnown RBP18.72■□□□□ 0.59
ZNF548-207ENST00000597400 PREX1Q8TCU6 1659 aa18.69■□□□□ 0.58
ZNF548-207ENST00000597400 PLPPR3Q6T4P5 718 aa18.68■□□□□ 0.58
ZNF548-207ENST00000597400 CDK13Q14004 1512 aaKnown RBP18.68■□□□□ 0.58
ZNF548-207ENST00000597400 FAM9AQ8IZU1 332 aaPredicted RBP18.67■□□□□ 0.58
ZNF548-207ENST00000597400 STRCQ7RTU9 1775 aa18.67■□□□□ 0.58
ZNF548-207ENST00000597400 ARHGEF12Q9NZN5 1544 aa18.66■□□□□ 0.58
ZNF548-207ENST00000597400 POGZQ7Z3K3 1410 aa18.66■□□□□ 0.58
ZNF548-207ENST00000597400 MAGI2Q86UL8 1455 aa18.65■□□□□ 0.58
ZNF548-207ENST00000597400 MYO5CQ9NQX4 1742 aa18.64■□□□□ 0.57
ZNF548-207ENST00000597400 RANGAP1P46060 587 aaPredicted RBP18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms