RNA–Protein interactions for RNA: ENST00000596802.5

SIN3B-209, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 1 (best) BASIC

Gene SIN3B, Length 2,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-209ENST00000596802 ANP32CO43423 234 aa32.07■■■□□ 2.72
SIN3B-209ENST00000596802 ERICH3Q5RHP9 1530 aa31.99■■■□□ 2.71
SIN3B-209ENST00000596802 SIN3AQ96ST3 1273 aa31.95■■■□□ 2.71
SIN3B-209ENST00000596802 IRX6P78412 446 aaPredicted RBP31.93■■■□□ 2.7
SIN3B-209ENST00000596802 HIRIP3Q9BW71 556 aaPredicted RBP31.93■■■□□ 2.7
SIN3B-209ENST00000596802 PRXQ9BXM0 1461 aa31.92■■■□□ 2.7
SIN3B-209ENST00000596802 SETD5Q9C0A6 1442 aa31.88■■■□□ 2.69
SIN3B-209ENST00000596802 TIMELESSQ9UNS1 1208 aa31.84■■■□□ 2.69
SIN3B-209ENST00000596802 ERICH6BQ5W0A0 696 aa31.8■■■□□ 2.68
SIN3B-209ENST00000596802 TOP2BQ02880 1626 aa31.79■■■□□ 2.68
SIN3B-209ENST00000596802 HNRNPUQ00839 825 aaKnown RBP eCLIP31.78■■■□□ 2.68
SIN3B-209ENST00000596802 PEG3Q9GZU2 1588 aa31.76■■■□□ 2.68
SIN3B-209ENST00000596802 ANO8Q9HCE9 1232 aaPredicted RBP31.76■■■□□ 2.67
SIN3B-209ENST00000596802 PPP4R2Q9NY27 417 aa31.75■■■□□ 2.67
SIN3B-209ENST00000596802 ARHGAP35Q9NRY4 1499 aa31.7■■■□□ 2.67
SIN3B-209ENST00000596802 NOP58Q9Y2X3 529 aaKnown RBP31.7■■■□□ 2.67
SIN3B-209ENST00000596802 NBR1Q14596 966 aa31.65■■■□□ 2.66
SIN3B-209ENST00000596802 DNAJC5BQ9UF47 199 aa31.64■■■□□ 2.66
SIN3B-209ENST00000596802 CC2D2AQ9P2K1 1620 aa31.64■■■□□ 2.66
SIN3B-209ENST00000596802 BIVM-ERCC5R4GMW8 1640 aa31.63■■■□□ 2.65
SIN3B-209ENST00000596802 PAK3O75914 559 aaPredicted RBP31.61■■■□□ 2.65
SIN3B-209ENST00000596802 TIAM1Q13009 1591 aa31.59■■■□□ 2.65
SIN3B-209ENST00000596802 B4GALNT3Q6L9W6 998 aa31.56■■■□□ 2.64
SIN3B-209ENST00000596802 MAP3K1Q13233 1512 aa31.55■■■□□ 2.64
SIN3B-209ENST00000596802 PHLDB1Q86UU1 1377 aa31.53■■■□□ 2.64
SIN3B-209ENST00000596802 SALL2Q9Y467 1007 aaPredicted RBP31.51■■■□□ 2.63
SIN3B-209ENST00000596802 ATAD2BQ9ULI0 1458 aa31.49■■■□□ 2.63
SIN3B-209ENST00000596802 FAM50AQ14320 339 aaKnown RBP31.47■■■□□ 2.63
SIN3B-209ENST00000596802 LRRC9Q6ZRR7 1453 aa31.47■■■□□ 2.63
SIN3B-209ENST00000596802 TONSLQ96HA7 1378 aa31.45■■■□□ 2.63
SIN3B-209ENST00000596802 KIF27Q86VH2 1401 aa31.39■■■□□ 2.62
SIN3B-209ENST00000596802 FHAD1B1AJZ9 1412 aa31.35■■■□□ 2.61
SIN3B-209ENST00000596802 NCAPD3P42695 1498 aa31.35■■■□□ 2.61
SIN3B-209ENST00000596802 RTL5Q5HYW3 569 aaPredicted RBP31.35■■■□□ 2.61
SIN3B-209ENST00000596802 IL27Q8NEV9 243 aa31.32■■■□□ 2.6
SIN3B-209ENST00000596802 IPO9Q96P70 1041 aaKnown RBP31.32■■■□□ 2.6
SIN3B-209ENST00000596802 CCDC184Q52MB2 194 aa31.31■■■□□ 2.6
SIN3B-209ENST00000596802 WASHC2AQ641Q2 1341 aa31.28■■■□□ 2.6
SIN3B-209ENST00000596802 ANP32AP39687 249 aaKnown RBP31.27■■■□□ 2.6
SIN3B-209ENST00000596802 ZBED9Q6R2W3 1325 aa31.26■■■□□ 2.59
SIN3B-209ENST00000596802 KDM5BQ9UGL1 1544 aa31.24■■■□□ 2.59
SIN3B-209ENST00000596802 CUX1P39880 1505 aa31.23■■■□□ 2.59
SIN3B-209ENST00000596802 CCDC136Q96JN2 1154 aa31.23■■■□□ 2.59
SIN3B-209ENST00000596802 CFAP43Q8NDM7 1665 aa31.23■■■□□ 2.59
SIN3B-209ENST00000596802 HMGXB3Q12766 1538 aa31.22■■■□□ 2.59
SIN3B-209ENST00000596802 ZBTB47Q9UFB7 747 aaPredicted RBP31.21■■■□□ 2.59
SIN3B-209ENST00000596802 NCOA2Q15596 1464 aa31.19■■■□□ 2.58
SIN3B-209ENST00000596802 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.18■■■□□ 2.582e-7■■■□□ 17.8
SIN3B-209ENST00000596802 FAM9BQ8IZU0 186 aa31.17■■■□□ 2.58
SIN3B-209ENST00000596802 CNTLNQ9NXG0 1405 aa31.16■■■□□ 2.58
SIN3B-209ENST00000596802 RTN4Q9NQC3 1192 aaKnown RBP31.16■■■□□ 2.58
SIN3B-209ENST00000596802 CCDC18Q5T9S5 1454 aa31.15■■■□□ 2.58
SIN3B-209ENST00000596802 UACAQ9BZF9 1416 aa31.14■■■□□ 2.58
SIN3B-209ENST00000596802 HSPA5P11021 654 aaKnown RBP31.14■■■□□ 2.58
SIN3B-209ENST00000596802 PRKRIP1Q9H875 184 aaPredicted RBP31.11■■■□□ 2.57
SIN3B-209ENST00000596802 MRS2Q9HD23 443 aa31.09■■■□□ 2.57
SIN3B-209ENST00000596802 PCF11O94913 1555 aaKnown RBP31.08■■■□□ 2.57
SIN3B-209ENST00000596802 AKNAQ7Z591 1439 aa31.04■■■□□ 2.56
SIN3B-209ENST00000596802 ZBTB4Q9P1Z0 1013 aaPredicted RBP31.04■■■□□ 2.56
SIN3B-209ENST00000596802 HFM1A2PYH4 1435 aa31.02■■■□□ 2.56
SIN3B-209ENST00000596802 SMG6Q86US8 1419 aaKnown RBP31.01■■■□□ 2.55
SIN3B-209ENST00000596802 PTPN23Q9H3S7 1636 aa31■■■□□ 2.55
SIN3B-209ENST00000596802 RNF123Q5XPI4 1314 aa30.99■■■□□ 2.55
SIN3B-209ENST00000596802 UBE2Q2Q8WVN8 375 aa30.98■■■□□ 2.55
SIN3B-209ENST00000596802 EIF4G2P78344 907 aaKnown RBP eCLIP30.97■■■□□ 2.557e-7■■■■■ 42.5
SIN3B-209ENST00000596802 IGF1RP08069 1367 aa30.97■■■□□ 2.55
SIN3B-209ENST00000596802 PTPRKQ15262 1439 aa30.95■■■□□ 2.55
SIN3B-209ENST00000596802 AQRO60306 1485 aaKnown RBP eCLIP30.95■■■□□ 2.552e-9■■■■■ 31.4
SIN3B-209ENST00000596802 FGD6Q6ZV73 1430 aa30.95■■■□□ 2.55
SIN3B-209ENST00000596802 C11orf95C9JLR9 678 aaPredicted RBP30.95■■■□□ 2.54
SIN3B-209ENST00000596802 USP35Q9P2H5 1018 aa30.93■■■□□ 2.54
SIN3B-209ENST00000596802 NCOA1Q15788 1441 aa30.92■■■□□ 2.54
SIN3B-209ENST00000596802 CCDC7Q96M83 1385 aa30.92■■■□□ 2.54
SIN3B-209ENST00000596802 WASHC2CQ9Y4E1 1318 aa30.92■■■□□ 2.54
SIN3B-209ENST00000596802 ATP1B4Q9UN42 357 aaPredicted RBP30.91■■■□□ 2.54
SIN3B-209ENST00000596802 NEFMP07197 916 aa30.9■■■□□ 2.54
SIN3B-209ENST00000596802 NAIPQ13075 1403 aa30.89■■■□□ 2.54
SIN3B-209ENST00000596802 NUDCQ9Y266 331 aa30.89■■■□□ 2.54
SIN3B-209ENST00000596802 FYCO1Q9BQS8 1478 aa30.86■■■□□ 2.53
SIN3B-209ENST00000596802 LAS1LQ9Y4W2 734 aaKnown RBP30.85■■■□□ 2.53
SIN3B-209ENST00000596802 CARMIL1Q5VZK9 1371 aa30.84■■■□□ 2.53
SIN3B-209ENST00000596802 P3H3Q8IVL6 736 aa30.84■■■□□ 2.53
SIN3B-209ENST00000596802 NPM2Q86SE8 214 aaKnown RBP30.8■■■□□ 2.52
SIN3B-209ENST00000596802 FMN1Q68DA7 1419 aa30.79■■■□□ 2.52
SIN3B-209ENST00000596802 CASKIN1Q8WXD9 1431 aa30.78■■■□□ 2.52
SIN3B-209ENST00000596802 FHOD3Q2V2M9 1422 aa30.77■■■□□ 2.52
SIN3B-209ENST00000596802 DENND4BO75064 1496 aaPredicted RBP30.74■■■□□ 2.51
SIN3B-209ENST00000596802 FGD5Q6ZNL6 1462 aa30.74■■■□□ 2.51
SIN3B-209ENST00000596802 PPM1GO15355 546 aaPredicted RBP30.72■■■□□ 2.51
SIN3B-209ENST00000596802 ABCA5Q8WWZ7 1642 aa30.71■■■□□ 2.51
SIN3B-209ENST00000596802 BRPF3Q9ULD4 1205 aa30.7■■■□□ 2.51
SIN3B-209ENST00000596802 KIF7Q2M1P5 1343 aa30.68■■■□□ 2.5
SIN3B-209ENST00000596802 TCERG1O14776 1098 aaKnown RBP30.68■■■□□ 2.5
SIN3B-209ENST00000596802 PDE4AP27815 886 aa30.66■■■□□ 2.5
SIN3B-209ENST00000596802 HECW1Q76N89 1606 aa30.66■■■□□ 2.5
SIN3B-209ENST00000596802 L3MBTL2Q969R5 705 aa30.65■■■□□ 2.5
SIN3B-209ENST00000596802 CFTRP13569 1480 aa30.65■■■□□ 2.5
SIN3B-209ENST00000596802 POLR1AO95602 1720 aaPredicted RBP30.64■■■□□ 2.5
SIN3B-209ENST00000596802 BACH2Q9BYV9 841 aa30.62■■■□□ 2.49
SIN3B-209ENST00000596802 EFCAB5A4FU69 1503 aa30.61■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms