RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 NPM1P06748 294 aaKnown RBP eCLIP25.05■■□□□ 1.6
SHKBP1-208ENST00000595726 ERICH3Q5RHP9 1530 aa24.96■■□□□ 1.59
SHKBP1-208ENST00000595726 DIP2BQ9P265 1576 aa24.95■■□□□ 1.58
SHKBP1-208ENST00000595726 MAPKBP1O60336 1514 aa24.93■■□□□ 1.58
SHKBP1-208ENST00000595726 TOP2BQ02880 1626 aa24.93■■□□□ 1.58
SHKBP1-208ENST00000595726 KDM6BO15054 1643 aa24.91■■□□□ 1.58
SHKBP1-208ENST00000595726 BIVM-ERCC5R4GMW8 1640 aa24.9■■□□□ 1.58
SHKBP1-208ENST00000595726 SUPT5HO00267 1087 aaKnown RBP24.9■■□□□ 1.58
SHKBP1-208ENST00000595726 ADCY10Q96PN6 1610 aa24.9■■□□□ 1.58
SHKBP1-208ENST00000595726 TSPOAP1O95153 1857 aa24.85■■□□□ 1.57
SHKBP1-208ENST00000595726 RUSC2Q8N2Y8 1516 aa24.85■■□□□ 1.57
SHKBP1-208ENST00000595726 TTBK1Q5TCY1 1321 aaPredicted RBP24.77■■□□□ 1.56
SHKBP1-208ENST00000595726 KIAA0586Q9BVV6 1533 aa24.7■■□□□ 1.54
SHKBP1-208ENST00000595726 PTPRGP23470 1445 aa24.67■■□□□ 1.54
SHKBP1-208ENST00000595726 ADGRL1O94910 1474 aa24.66■■□□□ 1.54
SHKBP1-208ENST00000595726 IGF1RP08069 1367 aa24.63■■□□□ 1.53
SHKBP1-208ENST00000595726 ASXL2Q76L83 1435 aa24.6■■□□□ 1.53
SHKBP1-208ENST00000595726 COL17A1Q9UMD9 1497 aaPredicted RBP24.58■■□□□ 1.53
SHKBP1-208ENST00000595726 PPRC1Q5VV67 1664 aaKnown RBP24.56■■□□□ 1.52
SHKBP1-208ENST00000595726 ABCC2Q92887 1545 aa24.56■■□□□ 1.52
SHKBP1-208ENST00000595726 HECW2Q9P2P5 1572 aa24.53■■□□□ 1.52
SHKBP1-208ENST00000595726 TNIKQ9UKE5 1360 aa24.53■■□□□ 1.52
SHKBP1-208ENST00000595726 PLB1Q6P1J6 1458 aa24.52■■□□□ 1.52
SHKBP1-208ENST00000595726 GLI2P10070 1586 aa24.5■■□□□ 1.51
SHKBP1-208ENST00000595726 CARMIL2Q6F5E8 1435 aa24.47■■□□□ 1.51
SHKBP1-208ENST00000595726 KIF27Q86VH2 1401 aa24.47■■□□□ 1.51
SHKBP1-208ENST00000595726 CUL7Q14999 1698 aa24.43■■□□□ 1.5
SHKBP1-208ENST00000595726 CARMIL1Q5VZK9 1371 aa24.42■■□□□ 1.5
SHKBP1-208ENST00000595726 UACAQ9BZF9 1416 aa24.42■■□□□ 1.5
SHKBP1-208ENST00000595726 EPRSP07814 1512 aaKnown RBP24.41■■□□□ 1.5
SHKBP1-208ENST00000595726 UHRF1BP1LA0JNW5 1464 aa24.4■■□□□ 1.5
SHKBP1-208ENST00000595726 MAP3K4Q9Y6R4 1608 aa24.35■■□□□ 1.49
SHKBP1-208ENST00000595726 TEX14Q8IWB6 1497 aa24.33■■□□□ 1.49
SHKBP1-208ENST00000595726 DISP1Q96F81 1524 aa24.33■■□□□ 1.49
SHKBP1-208ENST00000595726 IQGAP2Q13576 1575 aa24.33■■□□□ 1.48
SHKBP1-208ENST00000595726 KDM5BQ9UGL1 1544 aa24.32■■□□□ 1.48
SHKBP1-208ENST00000595726 ZCCHC11Q5TAX3 1644 aaKnown RBP24.27■■□□□ 1.48
SHKBP1-208ENST00000595726 FBXO41Q8TF61 875 aa24.26■■□□□ 1.47
SHKBP1-208ENST00000595726 KCNH8Q96L42 1107 aa24.22■■□□□ 1.47
SHKBP1-208ENST00000595726 WDR7Q9Y4E6 1490 aa24.19■■□□□ 1.46
SHKBP1-208ENST00000595726 CD109Q6YHK3 1445 aa24.18■■□□□ 1.46
SHKBP1-208ENST00000595726 UGGT2Q9NYU1 1516 aa24.15■■□□□ 1.46
SHKBP1-208ENST00000595726 MAGI3Q5TCQ9 1506 aa24.11■■□□□ 1.45
SHKBP1-208ENST00000595726 KIAA0556O60303 1618 aa24.11■■□□□ 1.45
SHKBP1-208ENST00000595726 KIF21BO75037 1637 aa24.1■■□□□ 1.45
SHKBP1-208ENST00000595726 RAPGEF2Q9Y4G8 1499 aa24.07■■□□□ 1.44
SHKBP1-208ENST00000595726 CFAP43Q8NDM7 1665 aa24.02■■□□□ 1.44
SHKBP1-208ENST00000595726 ARID3CA6NKF2 412 aa24■■□□□ 1.43
SHKBP1-208ENST00000595726 PTPRMP28827 1452 aa24■■□□□ 1.43
SHKBP1-208ENST00000595726 ABCA8O94911 1581 aa23.96■■□□□ 1.43
SHKBP1-208ENST00000595726 ARAP3Q8WWN8 1544 aa23.95■■□□□ 1.43
SHKBP1-208ENST00000595726 RAPGEF3O95398 923 aa23.95■■□□□ 1.42
SHKBP1-208ENST00000595726 ADAMTSL3P82987 1691 aa23.91■■□□□ 1.42
SHKBP1-208ENST00000595726 GOLGA3Q08378 1498 aa23.88■■□□□ 1.41
SHKBP1-208ENST00000595726 ARID4BQ4LE39 1312 aaPredicted RBP23.88■■□□□ 1.41
SHKBP1-208ENST00000595726 P3H3Q8IVL6 736 aa23.86■■□□□ 1.41
SHKBP1-208ENST00000595726 ATP10BO94823 1461 aa23.84■■□□□ 1.41
SHKBP1-208ENST00000595726 LMTK3Q96Q04 1460 aa23.84■■□□□ 1.41
SHKBP1-208ENST00000595726 HSPA2P54652 639 aa23.84■■□□□ 1.41
SHKBP1-208ENST00000595726 PCF11O94913 1555 aaKnown RBP23.83■■□□□ 1.41
SHKBP1-208ENST00000595726 CTTNBP2Q8WZ74 1663 aa23.82■■□□□ 1.4
SHKBP1-208ENST00000595726 PLPPR3Q6T4P5 718 aa23.81■■□□□ 1.4
SHKBP1-208ENST00000595726 MADDQ8WXG6 1647 aa23.8■■□□□ 1.4
SHKBP1-208ENST00000595726 PHLDB1Q86UU1 1377 aa23.79■■□□□ 1.4
SHKBP1-208ENST00000595726 BCORL1Q5H9F3 1711 aa23.78■■□□□ 1.4
SHKBP1-208ENST00000595726 ABCA9Q8IUA7 1624 aa23.75■■□□□ 1.39
SHKBP1-208ENST00000595726 CERKQ8TCT0 537 aa23.73■■□□□ 1.39
SHKBP1-208ENST00000595726 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.72■■□□□ 1.39
SHKBP1-208ENST00000595726 HNRNPUL2Q1KMD3 747 aaKnown RBP23.72■■□□□ 1.39
SHKBP1-208ENST00000595726 FRMPD1Q5SYB0 1578 aa23.72■■□□□ 1.39
SHKBP1-208ENST00000595726 NEO1Q92859 1461 aa23.71■■□□□ 1.39
SHKBP1-208ENST00000595726 FAM9AQ8IZU1 332 aaPredicted RBP23.71■■□□□ 1.39
SHKBP1-208ENST00000595726 ILDR2Q71H61 639 aa23.69■■□□□ 1.38
SHKBP1-208ENST00000595726 RIMS1Q86UR5 1692 aaKnown RBP23.68■■□□□ 1.38
SHKBP1-208ENST00000595726 PRXQ9BXM0 1461 aa23.66■■□□□ 1.38
SHKBP1-208ENST00000595726 MLECQ14165 292 aa23.61■■□□□ 1.37
SHKBP1-208ENST00000595726 DISP3Q9P2K9 1392 aa23.6■■□□□ 1.37
SHKBP1-208ENST00000595726 DENND4BO75064 1496 aaPredicted RBP23.6■■□□□ 1.37
SHKBP1-208ENST00000595726 ARHGEF40Q8TER5 1519 aa23.59■■□□□ 1.37
SHKBP1-208ENST00000595726 SOCS7O14512 581 aa23.56■■□□□ 1.36
SHKBP1-208ENST00000595726 AKNAQ7Z591 1439 aa23.56■■□□□ 1.36
SHKBP1-208ENST00000595726 RAPGEF6Q8TEU7 1601 aa23.55■■□□□ 1.36
SHKBP1-208ENST00000595726 YEATS2Q9ULM3 1422 aa23.54■■□□□ 1.36
SHKBP1-208ENST00000595726 RANGAP1P46060 587 aaPredicted RBP23.54■■□□□ 1.36
SHKBP1-208ENST00000595726 SIGLEC1Q9BZZ2 1709 aa23.53■■□□□ 1.36
SHKBP1-208ENST00000595726 FHOD3Q2V2M9 1422 aa23.53■■□□□ 1.36
SHKBP1-208ENST00000595726 POGZQ7Z3K3 1410 aa23.53■■□□□ 1.36
SHKBP1-208ENST00000595726 RICTORQ6R327 1708 aa23.53■■□□□ 1.36
SHKBP1-208ENST00000595726 NUP153P49790 1475 aaKnown RBP23.52■■□□□ 1.36
SHKBP1-208ENST00000595726 PLEKHD1A6NEE1 506 aa23.51■■□□□ 1.35
SHKBP1-208ENST00000595726 FANCAO15360 1455 aa23.5■■□□□ 1.35
SHKBP1-208ENST00000595726 CEBPAP49715 358 aaPredicted RBP23.48■■□□□ 1.35
SHKBP1-208ENST00000595726 SAMD9Q5K651 1589 aa23.48■■□□□ 1.35
SHKBP1-208ENST00000595726 ZFYVE16Q7Z3T8 1539 aa23.46■■□□□ 1.35
SHKBP1-208ENST00000595726 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.43■■□□□ 1.34
SHKBP1-208ENST00000595726 ZMYM4Q5VZL5 1548 aa23.42■■□□□ 1.34
SHKBP1-208ENST00000595726 EFCAB5A4FU69 1503 aa23.4■■□□□ 1.34
SHKBP1-208ENST00000595726 HECW1Q76N89 1606 aa23.39■■□□□ 1.33
SHKBP1-208ENST00000595726 FER1L4A9Z1Z3 1794 aa23.39■■□□□ 1.33
SHKBP1-208ENST00000595726 CSRNP3Q8WYN3 585 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms