RNA–Protein interactions for RNA: ENST00000592885.5

APOC1-209, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-209ENST00000592885 IGF1RP08069 1367 aa23.14■■□□□ 1.29
APOC1-209ENST00000592885 JPH4Q96JJ6 628 aa23.1■■□□□ 1.29
APOC1-209ENST00000592885 KIAA0586Q9BVV6 1533 aa23.09■■□□□ 1.29
APOC1-209ENST00000592885 CARMIL1Q5VZK9 1371 aa23■■□□□ 1.27
APOC1-209ENST00000592885 KIF13AQ9H1H9 1805 aa22.93■■□□□ 1.26
APOC1-209ENST00000592885 ADCY10Q96PN6 1610 aa22.92■■□□□ 1.26
APOC1-209ENST00000592885 MAPKBP1O60336 1514 aa22.92■■□□□ 1.26
APOC1-209ENST00000592885 IQGAP2Q13576 1575 aa22.91■■□□□ 1.26
APOC1-209ENST00000592885 CARMIL2Q6F5E8 1435 aa22.86■■□□□ 1.25
APOC1-209ENST00000592885 RAPGEF2Q9Y4G8 1499 aa22.85■■□□□ 1.25
APOC1-209ENST00000592885 NPM1P06748 294 aaKnown RBP eCLIP22.84■■□□□ 1.25
APOC1-209ENST00000592885 ABCC10Q5T3U5 1492 aa22.83■■□□□ 1.25
APOC1-209ENST00000592885 DIP2BQ9P265 1576 aa22.8■■□□□ 1.24
APOC1-209ENST00000592885 TNIKQ9UKE5 1360 aa22.8■■□□□ 1.24
APOC1-209ENST00000592885 PTPRGP23470 1445 aa22.8■■□□□ 1.24
APOC1-209ENST00000592885 UGGT2Q9NYU1 1516 aa22.77■■□□□ 1.24
APOC1-209ENST00000592885 DISP1Q96F81 1524 aa22.75■■□□□ 1.23
APOC1-209ENST00000592885 CTTNBP2Q8WZ74 1663 aa22.74■■□□□ 1.23
APOC1-209ENST00000592885 UHRF1BP1LA0JNW5 1464 aa22.73■■□□□ 1.23
APOC1-209ENST00000592885 ABCC2Q92887 1545 aa22.72■■□□□ 1.23
APOC1-209ENST00000592885 KIAA0556O60303 1618 aa22.71■■□□□ 1.23
APOC1-209ENST00000592885 FAM69CQ0P6D2 419 aa22.7■■□□□ 1.22
APOC1-209ENST00000592885 UACAQ9BZF9 1416 aa22.66■■□□□ 1.22
APOC1-209ENST00000592885 PRXQ9BXM0 1461 aa22.65■■□□□ 1.22
APOC1-209ENST00000592885 PLB1Q6P1J6 1458 aa22.63■■□□□ 1.21
APOC1-209ENST00000592885 GOLGA3Q08378 1498 aa22.61■■□□□ 1.21
APOC1-209ENST00000592885 GLI2P10070 1586 aa22.6■■□□□ 1.21
APOC1-209ENST00000592885 KDM5BQ9UGL1 1544 aa22.6■■□□□ 1.21
APOC1-209ENST00000592885 TTBK1Q5TCY1 1321 aaPredicted RBP22.59■■□□□ 1.21
APOC1-209ENST00000592885 ASXL2Q76L83 1435 aa22.59■■□□□ 1.21
APOC1-209ENST00000592885 KDM6BO15054 1643 aa22.57■■□□□ 1.2
APOC1-209ENST00000592885 TSPOAP1O95153 1857 aa22.56■■□□□ 1.2
APOC1-209ENST00000592885 ZCCHC11Q5TAX3 1644 aaKnown RBP22.56■■□□□ 1.2
APOC1-209ENST00000592885 AEBP2Q6ZN18 517 aaPredicted RBP22.51■■□□□ 1.19
APOC1-209ENST00000592885 EEA1Q15075 1411 aa22.49■■□□□ 1.19
APOC1-209ENST00000592885 PPRC1Q5VV67 1664 aaKnown RBP22.49■■□□□ 1.19
APOC1-209ENST00000592885 EPRSP07814 1512 aaKnown RBP22.48■■□□□ 1.19
APOC1-209ENST00000592885 ABCA8O94911 1581 aa22.48■■□□□ 1.19
APOC1-209ENST00000592885 MAP3K4Q9Y6R4 1608 aa22.47■■□□□ 1.19
APOC1-209ENST00000592885 WDR7Q9Y4E6 1490 aa22.43■■□□□ 1.18
APOC1-209ENST00000592885 CSRNP3Q8WYN3 585 aa22.42■■□□□ 1.18
APOC1-209ENST00000592885 TEX14Q8IWB6 1497 aa22.41■■□□□ 1.18
APOC1-209ENST00000592885 SAMD9Q5K651 1589 aa22.4■■□□□ 1.18
APOC1-209ENST00000592885 CFAP43Q8NDM7 1665 aa22.35■■□□□ 1.17
APOC1-209ENST00000592885 FAM9AQ8IZU1 332 aaPredicted RBP22.34■■□□□ 1.17
APOC1-209ENST00000592885 KIF21BO75037 1637 aa22.31■■□□□ 1.16
APOC1-209ENST00000592885 MAGI3Q5TCQ9 1506 aa22.28■■□□□ 1.16
APOC1-209ENST00000592885 RAPGEF6Q8TEU7 1601 aa22.27■■□□□ 1.16
APOC1-209ENST00000592885 CD109Q6YHK3 1445 aa22.23■■□□□ 1.15
APOC1-209ENST00000592885 COL17A1Q9UMD9 1497 aaPredicted RBP22.23■■□□□ 1.15
APOC1-209ENST00000592885 ATP10BO94823 1461 aa22.22■■□□□ 1.15
APOC1-209ENST00000592885 EFCAB5A4FU69 1503 aa22.22■■□□□ 1.15
APOC1-209ENST00000592885 P3H3Q8IVL6 736 aa22.2■■□□□ 1.14
APOC1-209ENST00000592885 ABCA9Q8IUA7 1624 aa22.18■■□□□ 1.14
APOC1-209ENST00000592885 KDM4FA0A1W2PPD8 638 aa22.15■■□□□ 1.14
APOC1-209ENST00000592885 KCNH8Q96L42 1107 aa22.15■■□□□ 1.14
APOC1-209ENST00000592885 NUP153P49790 1475 aaKnown RBP22.15■■□□□ 1.14
APOC1-209ENST00000592885 FHOD3Q2V2M9 1422 aa22.14■■□□□ 1.14
APOC1-209ENST00000592885 ADGRL1O94910 1474 aa22.1■■□□□ 1.13
APOC1-209ENST00000592885 ARAP3Q8WWN8 1544 aa22.1■■□□□ 1.13
APOC1-209ENST00000592885 PHLDB1Q86UU1 1377 aa22.09■■□□□ 1.13
APOC1-209ENST00000592885 ARID3CA6NKF2 412 aa22.07■■□□□ 1.12
APOC1-209ENST00000592885 CHIC1Q5VXU3 224 aa22.06■■□□□ 1.12
APOC1-209ENST00000592885 NEO1Q92859 1461 aa22.04■■□□□ 1.12
APOC1-209ENST00000592885 RANGAP1P46060 587 aaPredicted RBP22.02■■□□□ 1.12
APOC1-209ENST00000592885 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.01■■□□□ 1.11
APOC1-209ENST00000592885 HNRNPUL2Q1KMD3 747 aaKnown RBP22.01■■□□□ 1.11
APOC1-209ENST00000592885 CFAP74Q9C0B2 1584 aa21.98■■□□□ 1.11
APOC1-209ENST00000592885 FMN1Q68DA7 1419 aa21.97■■□□□ 1.11
APOC1-209ENST00000592885 HECW1Q76N89 1606 aa21.97■■□□□ 1.11
APOC1-209ENST00000592885 PLEKHD1A6NEE1 506 aa21.96■■□□□ 1.11
APOC1-209ENST00000592885 UBTFP17480 764 aaKnown RBP21.95■■□□□ 1.1
APOC1-209ENST00000592885 ARHGAP35Q9NRY4 1499 aa21.95■■□□□ 1.1
APOC1-209ENST00000592885 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.93■■□□□ 1.1
APOC1-209ENST00000592885 FRMPD1Q5SYB0 1578 aa21.92■■□□□ 1.1
APOC1-209ENST00000592885 CDK13Q14004 1512 aaKnown RBP21.91■■□□□ 1.1
APOC1-209ENST00000592885 TTC37Q6PGP7 1564 aa21.91■■□□□ 1.1
APOC1-209ENST00000592885 FANCAO15360 1455 aa21.88■■□□□ 1.09
APOC1-209ENST00000592885 RICTORQ6R327 1708 aa21.87■■□□□ 1.09
APOC1-209ENST00000592885 AKNAQ7Z591 1439 aa21.84■■□□□ 1.09
APOC1-209ENST00000592885 ARHGEF40Q8TER5 1519 aa21.84■■□□□ 1.09
APOC1-209ENST00000592885 DENND4BO75064 1496 aaPredicted RBP21.83■■□□□ 1.09
APOC1-209ENST00000592885 ZMYM4Q5VZL5 1548 aa21.82■■□□□ 1.08
APOC1-209ENST00000592885 RAPGEF3O95398 923 aa21.81■■□□□ 1.08
APOC1-209ENST00000592885 EHMT2Q96KQ7 1210 aa21.81■■□□□ 1.08
APOC1-209ENST00000592885 MYO5CQ9NQX4 1742 aa21.8■■□□□ 1.08
APOC1-209ENST00000592885 ADAMTSL3P82987 1691 aa21.8■■□□□ 1.08
APOC1-209ENST00000592885 KIF14Q15058 1648 aa21.8■■□□□ 1.08
APOC1-209ENST00000592885 CDK11AQ9UQ88 783 aaPredicted RBP21.79■■□□□ 1.08
APOC1-209ENST00000592885 LRRIQ1Q96JM4 1722 aa21.78■■□□□ 1.08
APOC1-209ENST00000592885 PLCH2O75038 1416 aa21.78■■□□□ 1.08
APOC1-209ENST00000592885 HECW2Q9P2P5 1572 aa21.78■■□□□ 1.08
APOC1-209ENST00000592885 BCORL1Q5H9F3 1711 aa21.77■■□□□ 1.08
APOC1-209ENST00000592885 TROQ12816 1431 aaPredicted RBP21.76■■□□□ 1.07
APOC1-209ENST00000592885 CLIP1P30622 1438 aa21.75■■□□□ 1.07
APOC1-209ENST00000592885 CCDC18Q5T9S5 1454 aa21.75■■□□□ 1.07
APOC1-209ENST00000592885 MAGI2Q86UL8 1455 aa21.75■■□□□ 1.07
APOC1-209ENST00000592885 PCF11O94913 1555 aaKnown RBP21.74■■□□□ 1.07
APOC1-209ENST00000592885 CASKIN1Q8WXD9 1431 aa21.73■■□□□ 1.07
APOC1-209ENST00000592885 ATP1B4Q9UN42 357 aaPredicted RBP21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms