RNA–Protein interactions for RNA: ENST00000592488.2

AP3D1-212, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 3

Gene AP3D1, Length 707 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-212ENST00000592488 CARMIL1Q5VZK9 1371 aa28.87■■■□□ 2.21
AP3D1-212ENST00000592488 JPH4Q96JJ6 628 aa28.86■■■□□ 2.21
AP3D1-212ENST00000592488 KIAA0586Q9BVV6 1533 aa28.83■■■□□ 2.21
AP3D1-212ENST00000592488 TRHP20396 242 aaPredicted RBP28.78■■■□□ 2.2
AP3D1-212ENST00000592488 RAPGEF2Q9Y4G8 1499 aa28.68■■■□□ 2.18
AP3D1-212ENST00000592488 IQGAP2Q13576 1575 aa28.63■■■□□ 2.17
AP3D1-212ENST00000592488 CARMIL2Q6F5E8 1435 aa28.54■■■□□ 2.16
AP3D1-212ENST00000592488 PRXQ9BXM0 1461 aa28.49■■■□□ 2.15
AP3D1-212ENST00000592488 ADCY10Q96PN6 1610 aa28.48■■■□□ 2.15
AP3D1-212ENST00000592488 PTPRGP23470 1445 aa28.47■■■□□ 2.15
AP3D1-212ENST00000592488 TNIKQ9UKE5 1360 aa28.47■■■□□ 2.15
AP3D1-212ENST00000592488 UGGT2Q9NYU1 1516 aa28.46■■■□□ 2.15
AP3D1-212ENST00000592488 DISP1Q96F81 1524 aa28.44■■■□□ 2.14
AP3D1-212ENST00000592488 CTTNBP2Q8WZ74 1663 aa28.44■■■□□ 2.14
AP3D1-212ENST00000592488 NPM1P06748 294 aaKnown RBP eCLIP28.43■■■□□ 2.14
AP3D1-212ENST00000592488 TTBK1Q5TCY1 1321 aaPredicted RBP28.39■■■□□ 2.13
AP3D1-212ENST00000592488 MAPKBP1O60336 1514 aa28.38■■■□□ 2.13
AP3D1-212ENST00000592488 KIAA0556O60303 1618 aa28.36■■■□□ 2.13
AP3D1-212ENST00000592488 EEA1Q15075 1411 aa28.36■■■□□ 2.13
AP3D1-212ENST00000592488 CSRNP3Q8WYN3 585 aa28.35■■■□□ 2.13
AP3D1-212ENST00000592488 KIF13AQ9H1H9 1805 aa28.34■■■□□ 2.13
AP3D1-212ENST00000592488 ABCC10Q5T3U5 1492 aa28.29■■■□□ 2.12
AP3D1-212ENST00000592488 ABCC2Q92887 1545 aa28.28■■■□□ 2.12
AP3D1-212ENST00000592488 GOLGA3Q08378 1498 aa28.28■■■□□ 2.12
AP3D1-212ENST00000592488 UHRF1BP1LA0JNW5 1464 aa28.27■■■□□ 2.12
AP3D1-212ENST00000592488 UACAQ9BZF9 1416 aa28.27■■■□□ 2.12
AP3D1-212ENST00000592488 DIP2BQ9P265 1576 aa28.24■■■□□ 2.11
AP3D1-212ENST00000592488 FAM69CQ0P6D2 419 aa28.22■■■□□ 2.11
AP3D1-212ENST00000592488 CHIC1Q5VXU3 224 aa28.2■■■□□ 2.1
AP3D1-212ENST00000592488 FAM9AQ8IZU1 332 aaPredicted RBP28.17■■■□□ 2.1
AP3D1-212ENST00000592488 KDM5BQ9UGL1 1544 aa28.14■■■□□ 2.1
AP3D1-212ENST00000592488 ASXL2Q76L83 1435 aa28.13■■■□□ 2.09
AP3D1-212ENST00000592488 PLB1Q6P1J6 1458 aa28.13■■■□□ 2.09
AP3D1-212ENST00000592488 KIF21BO75037 1637 aa28.1■■■□□ 2.09
AP3D1-212ENST00000592488 ZCCHC11Q5TAX3 1644 aaKnown RBP28.09■■■□□ 2.09
AP3D1-212ENST00000592488 ABCA8O94911 1581 aa28.07■■■□□ 2.08
AP3D1-212ENST00000592488 SAMD9Q5K651 1589 aa28.06■■■□□ 2.08
AP3D1-212ENST00000592488 GLI2P10070 1586 aa28.02■■■□□ 2.08
AP3D1-212ENST00000592488 P3H3Q8IVL6 736 aa28■■■□□ 2.07
AP3D1-212ENST00000592488 TSPOAP1O95153 1857 aa27.99■■■□□ 2.07
AP3D1-212ENST00000592488 EPRSP07814 1512 aaKnown RBP27.97■■■□□ 2.07
AP3D1-212ENST00000592488 WDR7Q9Y4E6 1490 aa27.95■■■□□ 2.06
AP3D1-212ENST00000592488 RANGAP1P46060 587 aaPredicted RBP27.91■■■□□ 2.06
AP3D1-212ENST00000592488 KDM6BO15054 1643 aa27.89■■■□□ 2.05
AP3D1-212ENST00000592488 EFCAB5A4FU69 1503 aa27.88■■■□□ 2.05
AP3D1-212ENST00000592488 PPRC1Q5VV67 1664 aaKnown RBP27.87■■■□□ 2.05
AP3D1-212ENST00000592488 MAP3K4Q9Y6R4 1608 aa27.87■■■□□ 2.05
AP3D1-212ENST00000592488 FHOD3Q2V2M9 1422 aa27.86■■■□□ 2.05
AP3D1-212ENST00000592488 RAPGEF6Q8TEU7 1601 aa27.85■■■□□ 2.05
AP3D1-212ENST00000592488 UBTFP17480 764 aaKnown RBP27.83■■■□□ 2.05
AP3D1-212ENST00000592488 EHMT2Q96KQ7 1210 aa27.83■■■□□ 2.05
AP3D1-212ENST00000592488 ATP10BO94823 1461 aa27.82■■■□□ 2.04
AP3D1-212ENST00000592488 ARID3CA6NKF2 412 aa27.8■■■□□ 2.04
AP3D1-212ENST00000592488 TEX14Q8IWB6 1497 aa27.78■■■□□ 2.04
AP3D1-212ENST00000592488 KCNH8Q96L42 1107 aa27.76■■■□□ 2.03
AP3D1-212ENST00000592488 NUP153P49790 1475 aaKnown RBP27.76■■■□□ 2.03
AP3D1-212ENST00000592488 CFAP43Q8NDM7 1665 aa27.75■■■□□ 2.03
AP3D1-212ENST00000592488 CD109Q6YHK3 1445 aa27.71■■■□□ 2.03
AP3D1-212ENST00000592488 MAGI3Q5TCQ9 1506 aa27.68■■■□□ 2.02
AP3D1-212ENST00000592488 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.67■■■□□ 2.02
AP3D1-212ENST00000592488 HNRNPUL2Q1KMD3 747 aaKnown RBP27.67■■■□□ 2.02
AP3D1-212ENST00000592488 ARHGAP35Q9NRY4 1499 aa27.66■■■□□ 2.02
AP3D1-212ENST00000592488 COL17A1Q9UMD9 1497 aaPredicted RBP27.63■■■□□ 2.01
AP3D1-212ENST00000592488 ABCA9Q8IUA7 1624 aa27.62■■■□□ 2.01
AP3D1-212ENST00000592488 FMN1Q68DA7 1419 aa27.61■■■□□ 2.01
AP3D1-212ENST00000592488 AEBP2Q6ZN18 517 aaPredicted RBP27.6■■■□□ 2.01
AP3D1-212ENST00000592488 PLEKHD1A6NEE1 506 aa27.54■■■□□ 2
AP3D1-212ENST00000592488 HECW1Q76N89 1606 aa27.53■■■□□ 2
AP3D1-212ENST00000592488 CDK13Q14004 1512 aaKnown RBP27.51■■■□□ 2
AP3D1-212ENST00000592488 ATP1B4Q9UN42 357 aaPredicted RBP27.46■■□□□ 1.99
AP3D1-212ENST00000592488 ARAP3Q8WWN8 1544 aa27.46■■□□□ 1.99
AP3D1-212ENST00000592488 PHLDB1Q86UU1 1377 aa27.45■■□□□ 1.98
AP3D1-212ENST00000592488 NEO1Q92859 1461 aa27.43■■□□□ 1.98
AP3D1-212ENST00000592488 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.41■■□□□ 1.982e-7■□□□□ 10.2
AP3D1-212ENST00000592488 CLIP1P30622 1438 aa27.39■■□□□ 1.97
AP3D1-212ENST00000592488 TTC37Q6PGP7 1564 aa27.39■■□□□ 1.97
AP3D1-212ENST00000592488 PCF11O94913 1555 aaKnown RBP27.36■■□□□ 1.97
AP3D1-212ENST00000592488 KDM4FA0A1W2PPD8 638 aa27.36■■□□□ 1.97
AP3D1-212ENST00000592488 CDK11AQ9UQ88 783 aaPredicted RBP27.36■■□□□ 1.97
AP3D1-212ENST00000592488 CASKIN1Q8WXD9 1431 aa27.35■■□□□ 1.97
AP3D1-212ENST00000592488 LRRIQ1Q96JM4 1722 aa27.33■■□□□ 1.97
AP3D1-212ENST00000592488 CFAP74Q9C0B2 1584 aa27.32■■□□□ 1.96
AP3D1-212ENST00000592488 FANCAO15360 1455 aa27.31■■□□□ 1.96
AP3D1-212ENST00000592488 ADGRL1O94910 1474 aa27.3■■□□□ 1.96
AP3D1-212ENST00000592488 CCDC18Q5T9S5 1454 aa27.3■■□□□ 1.96
AP3D1-212ENST00000592488 TROQ12816 1431 aaPredicted RBP27.29■■□□□ 1.96
AP3D1-212ENST00000592488 FYCO1Q9BQS8 1478 aa27.29■■□□□ 1.96
AP3D1-212ENST00000592488 KIF14Q15058 1648 aa27.27■■□□□ 1.96
AP3D1-212ENST00000592488 AKNAQ7Z591 1439 aa27.26■■□□□ 1.95
AP3D1-212ENST00000592488 RAPGEF3O95398 923 aa27.26■■□□□ 1.95
AP3D1-212ENST00000592488 FRMPD1Q5SYB0 1578 aa27.26■■□□□ 1.95
AP3D1-212ENST00000592488 PLCH2O75038 1416 aa27.24■■□□□ 1.95
AP3D1-212ENST00000592488 MYO5CQ9NQX4 1742 aa27.22■■□□□ 1.95
AP3D1-212ENST00000592488 DENND4BO75064 1496 aaPredicted RBP27.22■■□□□ 1.95
AP3D1-212ENST00000592488 RICTORQ6R327 1708 aa27.19■■□□□ 1.94
AP3D1-212ENST00000592488 CEP162Q5TB80 1403 aa27.18■■□□□ 1.94
AP3D1-212ENST00000592488 EFCAB2Q5VUJ9 269 aa27.14■■□□□ 1.94
AP3D1-212ENST00000592488 ARHGAP5Q13017 1502 aa27.11■■□□□ 1.93
AP3D1-212ENST00000592488 ZMYM4Q5VZL5 1548 aa27.11■■□□□ 1.93
AP3D1-212ENST00000592488 ARHGEF40Q8TER5 1519 aa27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms