RNA–Protein interactions for RNA: ENST00000592488.2

AP3D1-212, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 3

Gene AP3D1, Length 707 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-212ENST00000592488 NISCHQ9Y2I1 1504 aa41.55■■■■■ 4.24
AP3D1-212ENST00000592488 CCDC180Q9P1Z9 1646 aa37.12■■■■□ 3.53
AP3D1-212ENST00000592488 ABCC9O60706 1549 aa36.62■■■■□ 3.45
AP3D1-212ENST00000592488 RB1CC1Q8TDY2 1594 aa35.09■■■■□ 3.21
AP3D1-212ENST00000592488 NACADO15069 1562 aa34.96■■■■□ 3.19
AP3D1-212ENST00000592488 DCAF8L2P0C7V8 631 aa34.81■■■■□ 3.16
AP3D1-212ENST00000592488 MYO15BQ96JP2 1530 aa34.65■■■■□ 3.14
AP3D1-212ENST00000592488 ZCCHC6Q5VYS8 1495 aaKnown RBP34.55■■■■□ 3.12
AP3D1-212ENST00000592488 DCAF1Q9Y4B6 1507 aa34.38■■■■□ 3.09
AP3D1-212ENST00000592488 UNC13AQ9UPW8 1703 aa34.27■■■■□ 3.08
AP3D1-212ENST00000592488 PABPN1Q86U42 306 aaKnown RBP eCLIP34.13■■■■□ 3.05
AP3D1-212ENST00000592488 BICRAQ9NZM4 1560 aa34.02■■■■□ 3.04
AP3D1-212ENST00000592488 DNAJC5BQ9UF47 199 aa33.87■■■■□ 3.01
AP3D1-212ENST00000592488 SCRIBQ14160 1630 aa33.82■■■■□ 3.01
AP3D1-212ENST00000592488 SHROOM4Q9ULL8 1493 aa33.69■■■□□ 2.98
AP3D1-212ENST00000592488 EIF4G1Q04637 1599 aaKnown RBP33.17■■■□□ 2.9
AP3D1-212ENST00000592488 CC2D2AQ9P2K1 1620 aa33.11■■■□□ 2.89
AP3D1-212ENST00000592488 CECR2Q9BXF3 1484 aa32.94■■■□□ 2.86
AP3D1-212ENST00000592488 SMARCA4P51532 1647 aa32.33■■■□□ 2.77
AP3D1-212ENST00000592488 NCAPD3P42695 1498 aa32.25■■■□□ 2.75
AP3D1-212ENST00000592488 BAZ1AQ9NRL2 1556 aaPredicted RBP32.24■■■□□ 2.75
AP3D1-212ENST00000592488 ATAD2BQ9ULI0 1458 aa32.23■■■□□ 2.75
AP3D1-212ENST00000592488 SMARCA2P51531 1590 aa32.19■■■□□ 2.74
AP3D1-212ENST00000592488 HMGXB3Q12766 1538 aa32.09■■■□□ 2.73
AP3D1-212ENST00000592488 PEG3Q9GZU2 1588 aa32.02■■■□□ 2.72
AP3D1-212ENST00000592488 MROH2BQ7Z745 1585 aa32.01■■■□□ 2.71
AP3D1-212ENST00000592488 BAZ1BQ9UIG0 1483 aaKnown RBP31.96■■■□□ 2.71
AP3D1-212ENST00000592488 WIZO95785 1651 aa31.64■■■□□ 2.66
AP3D1-212ENST00000592488 ERCC6Q03468 1493 aa31.6■■■□□ 2.65
AP3D1-212ENST00000592488 NESP48681 1621 aa31.57■■■□□ 2.64
AP3D1-212ENST00000592488 RSF1Q96T23 1441 aaPredicted RBP31.51■■■□□ 2.64
AP3D1-212ENST00000592488 LAMC3Q9Y6N6 1575 aa31.47■■■□□ 2.63
AP3D1-212ENST00000592488 CUX2O14529 1486 aa31.4■■■□□ 2.62
AP3D1-212ENST00000592488 TOP2AP11388 1531 aaKnown RBP31.31■■■□□ 2.6
AP3D1-212ENST00000592488 CADPSQ9ULU8 1353 aa31.3■■■□□ 2.6
AP3D1-212ENST00000592488 PDS5BQ9NTI5 1447 aa31.27■■■□□ 2.6
AP3D1-212ENST00000592488 KIF21AQ7Z4S6 1674 aa31.21■■■□□ 2.59
AP3D1-212ENST00000592488 THOC2Q8NI27 1593 aaKnown RBP31.2■■■□□ 2.58
AP3D1-212ENST00000592488 CFTRP13569 1480 aa31.04■■■□□ 2.56
AP3D1-212ENST00000592488 MRC2Q9UBG0 1479 aa30.98■■■□□ 2.55
AP3D1-212ENST00000592488 CEP164Q9UPV0 1460 aa30.95■■■□□ 2.55
AP3D1-212ENST00000592488 FANCD2Q9BXW9 1451 aa30.95■■■□□ 2.54
AP3D1-212ENST00000592488 CCDC88BA6NC98 1476 aa30.92■■■□□ 2.54
AP3D1-212ENST00000592488 WDR62O43379 1518 aa30.88■■■□□ 2.53
AP3D1-212ENST00000592488 PRDM2Q13029 1718 aa30.79■■■□□ 2.52
AP3D1-212ENST00000592488 DNAJC5Q9H3Z4 198 aa30.79■■■□□ 2.52
AP3D1-212ENST00000592488 URB2Q14146 1524 aaKnown RBP30.65■■■□□ 2.5
AP3D1-212ENST00000592488 SUPT5HO00267 1087 aaKnown RBP30.45■■■□□ 2.47
AP3D1-212ENST00000592488 TOPBP1Q92547 1522 aa30.42■■■□□ 2.46
AP3D1-212ENST00000592488 ABCC8Q09428 1581 aa30.4■■■□□ 2.46
AP3D1-212ENST00000592488 DNMBPQ6XZF7 1577 aa30.37■■■□□ 2.45
AP3D1-212ENST00000592488 IFT140Q96RY7 1462 aa30.31■■■□□ 2.44
AP3D1-212ENST00000592488 ZNF608Q9ULD9 1512 aaPredicted RBP30.19■■■□□ 2.42
AP3D1-212ENST00000592488 POLA1P09884 1462 aaPredicted RBP30.13■■■□□ 2.41
AP3D1-212ENST00000592488 TARBP1Q13395 1621 aaKnown RBP30.11■■■□□ 2.41
AP3D1-212ENST00000592488 EIF4G3O43432 1585 aaKnown RBP30.08■■■□□ 2.41
AP3D1-212ENST00000592488 CUX1P39880 1505 aa30.05■■■□□ 2.4
AP3D1-212ENST00000592488 FGD5Q6ZNL6 1462 aa30.01■■■□□ 2.4
AP3D1-212ENST00000592488 RAD54L2Q9Y4B4 1467 aa29.99■■■□□ 2.39
AP3D1-212ENST00000592488 SOGA1O94964 1423 aa29.99■■■□□ 2.39
AP3D1-212ENST00000592488 OSCARQ8IYS5 282 aa29.99■■■□□ 2.39
AP3D1-212ENST00000592488 AQRO60306 1485 aaKnown RBP eCLIP29.97■■■□□ 2.391e-7■■■■■ 34.5
AP3D1-212ENST00000592488 WDR97A6NE52 1622 aa29.87■■■□□ 2.37
AP3D1-212ENST00000592488 TDRD9Q8NDG6 1382 aaKnown RBP29.86■■■□□ 2.37
AP3D1-212ENST00000592488 CHD1O14646 1710 aa29.75■■■□□ 2.35
AP3D1-212ENST00000592488 WRNQ14191 1432 aaPredicted RBP eCLIP29.74■■■□□ 2.35
AP3D1-212ENST00000592488 TOP2BQ02880 1626 aa29.71■■■□□ 2.35
AP3D1-212ENST00000592488 BIVM-ERCC5R4GMW8 1640 aa29.71■■■□□ 2.35
AP3D1-212ENST00000592488 ABCA10Q8WWZ4 1543 aa29.71■■■□□ 2.35
AP3D1-212ENST00000592488 GRIN2BQ13224 1484 aa29.7■■■□□ 2.35
AP3D1-212ENST00000592488 SNAPC4Q5SXM2 1469 aa29.7■■■□□ 2.35
AP3D1-212ENST00000592488 SYNJ1O43426 1573 aa29.69■■■□□ 2.34
AP3D1-212ENST00000592488 FBLN2P98095 1184 aa29.68■■■□□ 2.34
AP3D1-212ENST00000592488 MAGI1Q96QZ7 1491 aaPredicted RBP29.66■■■□□ 2.34
AP3D1-212ENST00000592488 GAPVD1Q14C86 1478 aa29.65■■■□□ 2.34
AP3D1-212ENST00000592488 TRIM41Q8WV44 630 aa29.64■■■□□ 2.34
AP3D1-212ENST00000592488 ABCA5Q8WWZ7 1642 aa29.63■■■□□ 2.33
AP3D1-212ENST00000592488 PBRM1Q86U86 1689 aa29.62■■■□□ 2.33
AP3D1-212ENST00000592488 RIMBP3CA6NJZ7 1639 aa29.58■■■□□ 2.33
AP3D1-212ENST00000592488 RIMBP3BA6NNM3 1639 aa29.58■■■□□ 2.33
AP3D1-212ENST00000592488 RIMBP3Q9UFD9 1639 aa29.58■■■□□ 2.33
AP3D1-212ENST00000592488 SYNJ2O15056 1496 aa29.55■■■□□ 2.32
AP3D1-212ENST00000592488 ARHGEF11O15085 1522 aa29.55■■■□□ 2.32
AP3D1-212ENST00000592488 CHMP7Q8WUX9 453 aaPredicted RBP29.54■■■□□ 2.32
AP3D1-212ENST00000592488 CLASP1Q7Z460 1538 aa29.43■■■□□ 2.3
AP3D1-212ENST00000592488 ADAMTS12P58397 1594 aa29.38■■■□□ 2.29
AP3D1-212ENST00000592488 ERICH3Q5RHP9 1530 aa29.35■■■□□ 2.29
AP3D1-212ENST00000592488 GRIN2AQ12879 1464 aa29.32■■■□□ 2.28
AP3D1-212ENST00000592488 FHAD1B1AJZ9 1412 aa29.29■■■□□ 2.28
AP3D1-212ENST00000592488 ARAP1Q96P48 1450 aa29.28■■■□□ 2.28
AP3D1-212ENST00000592488 CYB5RLQ6IPT4 315 aa29.25■■■□□ 2.27
AP3D1-212ENST00000592488 NUP160Q12769 1436 aa29.2■■■□□ 2.26
AP3D1-212ENST00000592488 CEP170Q5SW79 1584 aa29.18■■■□□ 2.26
AP3D1-212ENST00000592488 KIF27Q86VH2 1401 aa29.15■■■□□ 2.26
AP3D1-212ENST00000592488 IGF1RP08069 1367 aa29.05■■■□□ 2.24
AP3D1-212ENST00000592488 CUL7Q14999 1698 aa29.02■■■□□ 2.24
AP3D1-212ENST00000592488 SHROOM2Q13796 1616 aa29.02■■■□□ 2.24
AP3D1-212ENST00000592488 ERCC6L2Q5T890 1561 aa28.98■■■□□ 2.23
AP3D1-212ENST00000592488 RUSC2Q8N2Y8 1516 aa28.95■■■□□ 2.23
AP3D1-212ENST00000592488 PRG4Q92954 1404 aaPredicted RBP28.87■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms