RNA–Protein interactions for RNA: ENST00000592354.5

CAPNS1-213, Transcript of calpain small subunit 1, humanhuman

TSL 2

Gene CAPNS1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-213ENST00000592354 IGF1RP08069 1367 aa23.53■■□□□ 1.36
CAPNS1-213ENST00000592354 JPH4Q96JJ6 628 aa23.51■■□□□ 1.35
CAPNS1-213ENST00000592354 KIAA0586Q9BVV6 1533 aa23.46■■□□□ 1.35
CAPNS1-213ENST00000592354 KIF13AQ9H1H9 1805 aa23.44■■□□□ 1.34
CAPNS1-213ENST00000592354 ADCY10Q96PN6 1610 aa23.41■■□□□ 1.34
CAPNS1-213ENST00000592354 CARMIL1Q5VZK9 1371 aa23.4■■□□□ 1.34
CAPNS1-213ENST00000592354 IQGAP2Q13576 1575 aa23.35■■□□□ 1.33
CAPNS1-213ENST00000592354 MAPKBP1O60336 1514 aa23.3■■□□□ 1.32
CAPNS1-213ENST00000592354 DIP2BQ9P265 1576 aa23.27■■□□□ 1.32
CAPNS1-213ENST00000592354 TTBK1Q5TCY1 1321 aaPredicted RBP23.24■■□□□ 1.31
CAPNS1-213ENST00000592354 ABCC10Q5T3U5 1492 aa23.24■■□□□ 1.31
CAPNS1-213ENST00000592354 RAPGEF2Q9Y4G8 1499 aa23.24■■□□□ 1.31
CAPNS1-213ENST00000592354 NPM1P06748 294 aaKnown RBP eCLIP23.22■■□□□ 1.31
CAPNS1-213ENST00000592354 CARMIL2Q6F5E8 1435 aa23.22■■□□□ 1.31
CAPNS1-213ENST00000592354 CTTNBP2Q8WZ74 1663 aa23.21■■□□□ 1.31
CAPNS1-213ENST00000592354 PTPRGP23470 1445 aa23.2■■□□□ 1.3
CAPNS1-213ENST00000592354 DISP1Q96F81 1524 aa23.18■■□□□ 1.3
CAPNS1-213ENST00000592354 TNIKQ9UKE5 1360 aa23.18■■□□□ 1.3
CAPNS1-213ENST00000592354 FAM69CQ0P6D2 419 aa23.16■■□□□ 1.3
CAPNS1-213ENST00000592354 UGGT2Q9NYU1 1516 aa23.15■■□□□ 1.3
CAPNS1-213ENST00000592354 TSPOAP1O95153 1857 aa23.15■■□□□ 1.3
CAPNS1-213ENST00000592354 KIAA0556O60303 1618 aa23.15■■□□□ 1.3
CAPNS1-213ENST00000592354 ABCC2Q92887 1545 aa23.13■■□□□ 1.29
CAPNS1-213ENST00000592354 UHRF1BP1LA0JNW5 1464 aa23.06■■□□□ 1.28
CAPNS1-213ENST00000592354 UACAQ9BZF9 1416 aa23.06■■□□□ 1.28
CAPNS1-213ENST00000592354 KDM6BO15054 1643 aa23.05■■□□□ 1.28
CAPNS1-213ENST00000592354 ZCCHC11Q5TAX3 1644 aaKnown RBP23.04■■□□□ 1.28
CAPNS1-213ENST00000592354 ASXL2Q76L83 1435 aa23.03■■□□□ 1.28
CAPNS1-213ENST00000592354 PRXQ9BXM0 1461 aa23.02■■□□□ 1.28
CAPNS1-213ENST00000592354 AEBP2Q6ZN18 517 aaPredicted RBP23■■□□□ 1.27
CAPNS1-213ENST00000592354 PPRC1Q5VV67 1664 aaKnown RBP22.99■■□□□ 1.27
CAPNS1-213ENST00000592354 PLB1Q6P1J6 1458 aa22.98■■□□□ 1.27
CAPNS1-213ENST00000592354 KDM5BQ9UGL1 1544 aa22.98■■□□□ 1.27
CAPNS1-213ENST00000592354 GLI2P10070 1586 aa22.97■■□□□ 1.27
CAPNS1-213ENST00000592354 GOLGA3Q08378 1498 aa22.95■■□□□ 1.26
CAPNS1-213ENST00000592354 MAP3K4Q9Y6R4 1608 aa22.91■■□□□ 1.26
CAPNS1-213ENST00000592354 EPRSP07814 1512 aaKnown RBP22.9■■□□□ 1.26
CAPNS1-213ENST00000592354 ABCA8O94911 1581 aa22.89■■□□□ 1.26
CAPNS1-213ENST00000592354 WDR7Q9Y4E6 1490 aa22.84■■□□□ 1.25
CAPNS1-213ENST00000592354 SAMD9Q5K651 1589 aa22.8■■□□□ 1.24
CAPNS1-213ENST00000592354 CSRNP3Q8WYN3 585 aa22.79■■□□□ 1.24
CAPNS1-213ENST00000592354 TEX14Q8IWB6 1497 aa22.76■■□□□ 1.23
CAPNS1-213ENST00000592354 EEA1Q15075 1411 aa22.75■■□□□ 1.23
CAPNS1-213ENST00000592354 CFAP43Q8NDM7 1665 aa22.75■■□□□ 1.23
CAPNS1-213ENST00000592354 P3H3Q8IVL6 736 aa22.75■■□□□ 1.23
CAPNS1-213ENST00000592354 COL17A1Q9UMD9 1497 aaPredicted RBP22.72■■□□□ 1.23
CAPNS1-213ENST00000592354 RAPGEF6Q8TEU7 1601 aa22.71■■□□□ 1.23
CAPNS1-213ENST00000592354 ARID3CA6NKF2 412 aa22.7■■□□□ 1.22
CAPNS1-213ENST00000592354 FAM9AQ8IZU1 332 aaPredicted RBP22.7■■□□□ 1.22
CAPNS1-213ENST00000592354 KIF21BO75037 1637 aa22.68■■□□□ 1.22
CAPNS1-213ENST00000592354 KCNH8Q96L42 1107 aa22.66■■□□□ 1.22
CAPNS1-213ENST00000592354 RANGAP1P46060 587 aaPredicted RBP22.65■■□□□ 1.22
CAPNS1-213ENST00000592354 ATP10BO94823 1461 aa22.65■■□□□ 1.22
CAPNS1-213ENST00000592354 CD109Q6YHK3 1445 aa22.65■■□□□ 1.22
CAPNS1-213ENST00000592354 MAGI3Q5TCQ9 1506 aa22.63■■□□□ 1.21
CAPNS1-213ENST00000592354 KDM4FA0A1W2PPD8 638 aa22.63■■□□□ 1.21
CAPNS1-213ENST00000592354 FHOD3Q2V2M9 1422 aa22.62■■□□□ 1.21
CAPNS1-213ENST00000592354 ABCA9Q8IUA7 1624 aa22.59■■□□□ 1.21
CAPNS1-213ENST00000592354 ADGRL1O94910 1474 aa22.59■■□□□ 1.21
CAPNS1-213ENST00000592354 NUP153P49790 1475 aaKnown RBP22.57■■□□□ 1.2
CAPNS1-213ENST00000592354 EFCAB5A4FU69 1503 aa22.57■■□□□ 1.2
CAPNS1-213ENST00000592354 EHMT2Q96KQ7 1210 aa22.51■■□□□ 1.19
CAPNS1-213ENST00000592354 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.49■■□□□ 1.19
CAPNS1-213ENST00000592354 HNRNPUL2Q1KMD3 747 aaKnown RBP22.49■■□□□ 1.19
CAPNS1-213ENST00000592354 CHIC1Q5VXU3 224 aa22.47■■□□□ 1.19
CAPNS1-213ENST00000592354 ARAP3Q8WWN8 1544 aa22.45■■□□□ 1.18
CAPNS1-213ENST00000592354 CDK13Q14004 1512 aaKnown RBP22.42■■□□□ 1.18
CAPNS1-213ENST00000592354 FRMPD1Q5SYB0 1578 aa22.4■■□□□ 1.18
CAPNS1-213ENST00000592354 TTC37Q6PGP7 1564 aa22.4■■□□□ 1.18
CAPNS1-213ENST00000592354 UBTFP17480 764 aaKnown RBP22.39■■□□□ 1.17
CAPNS1-213ENST00000592354 NEO1Q92859 1461 aa22.38■■□□□ 1.17
CAPNS1-213ENST00000592354 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.36■■□□□ 1.17
CAPNS1-213ENST00000592354 ARHGAP35Q9NRY4 1499 aa22.36■■□□□ 1.17
CAPNS1-213ENST00000592354 HECW1Q76N89 1606 aa22.36■■□□□ 1.17
CAPNS1-213ENST00000592354 CFAP74Q9C0B2 1584 aa22.34■■□□□ 1.17
CAPNS1-213ENST00000592354 PHLDB1Q86UU1 1377 aa22.33■■□□□ 1.17
CAPNS1-213ENST00000592354 PLEKHD1A6NEE1 506 aa22.32■■□□□ 1.16
CAPNS1-213ENST00000592354 RICTORQ6R327 1708 aa22.31■■□□□ 1.16
CAPNS1-213ENST00000592354 RAPGEF3O95398 923 aa22.31■■□□□ 1.16
CAPNS1-213ENST00000592354 LRRIQ1Q96JM4 1722 aa22.31■■□□□ 1.16
CAPNS1-213ENST00000592354 FMN1Q68DA7 1419 aa22.3■■□□□ 1.16
CAPNS1-213ENST00000592354 HECW2Q9P2P5 1572 aa22.29■■□□□ 1.16
CAPNS1-213ENST00000592354 FANCAO15360 1455 aa22.28■■□□□ 1.16
CAPNS1-213ENST00000592354 ARHGEF40Q8TER5 1519 aa22.26■■□□□ 1.15
CAPNS1-213ENST00000592354 ATP1B4Q9UN42 357 aaPredicted RBP22.26■■□□□ 1.15
CAPNS1-213ENST00000592354 MYO5CQ9NQX4 1742 aa22.25■■□□□ 1.15
CAPNS1-213ENST00000592354 KIF14Q15058 1648 aa22.24■■□□□ 1.15
CAPNS1-213ENST00000592354 AKNAQ7Z591 1439 aa22.23■■□□□ 1.15
CAPNS1-213ENST00000592354 DENND4BO75064 1496 aaPredicted RBP22.22■■□□□ 1.15
CAPNS1-213ENST00000592354 PCF11O94913 1555 aaKnown RBP22.22■■□□□ 1.15
CAPNS1-213ENST00000592354 ADAMTSL3P82987 1691 aa22.22■■□□□ 1.15
CAPNS1-213ENST00000592354 BCORL1Q5H9F3 1711 aa22.21■■□□□ 1.15
CAPNS1-213ENST00000592354 ZMYM4Q5VZL5 1548 aa22.19■■□□□ 1.14
CAPNS1-213ENST00000592354 MADDQ8WXG6 1647 aa22.17■■□□□ 1.14
CAPNS1-213ENST00000592354 SIGLEC1Q9BZZ2 1709 aa22.16■■□□□ 1.14
CAPNS1-213ENST00000592354 ZFYVE16Q7Z3T8 1539 aa22.15■■□□□ 1.14
CAPNS1-213ENST00000592354 PLCH2O75038 1416 aa22.14■■□□□ 1.13
CAPNS1-213ENST00000592354 TROQ12816 1431 aaPredicted RBP22.13■■□□□ 1.13
CAPNS1-213ENST00000592354 RIMS1Q86UR5 1692 aaKnown RBP22.12■■□□□ 1.13
CAPNS1-213ENST00000592354 PTPRMP28827 1452 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms