RNA–Protein interactions for RNA: ENST00000592354.5

CAPNS1-213, Transcript of calpain small subunit 1, humanhuman

TSL 2

Gene CAPNS1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-213ENST00000592354 MIR22HGQ0VDD5 57 aa4.92□□□□□ -1.62
CAPNS1-213ENST00000592354 KRTAP19-5Q3LI72 72 aa4.92□□□□□ -1.62
CAPNS1-213ENST00000592354 RPS28P62857 69 aaKnown RBP4.88□□□□□ -1.63
CAPNS1-213ENST00000592354 KRTAP4-12Q9BQ66 201 aa4.88□□□□□ -1.63
CAPNS1-213ENST00000592354 C10orf95Q9H7T3 257 aa4.88□□□□□ -1.63
CAPNS1-213ENST00000592354 MT1GP13640 62 aa4.86□□□□□ -1.63
CAPNS1-213ENST00000592354 LCE1DQ5T752 114 aa4.85□□□□□ -1.63
CAPNS1-213ENST00000592354 PP632Q6XCG6 107 aa4.83□□□□□ -1.64
CAPNS1-213ENST00000592354 A6NED7 52 aa4.81□□□□□ -1.64
CAPNS1-213ENST00000592354 MT1MQ8N339 61 aa4.81□□□□□ -1.64
CAPNS1-213ENST00000592354 MT4P47944 62 aa4.8□□□□□ -1.64
CAPNS1-213ENST00000592354 MT1LQ93083 61 aa4.79□□□□□ -1.64
CAPNS1-213ENST00000592354 TNP1P09430 55 aa4.78□□□□□ -1.64
CAPNS1-213ENST00000592354 LCE3AQ5TA76 89 aa4.76□□□□□ -1.65
CAPNS1-213ENST00000592354 K7ERS5 55 aa4.75□□□□□ -1.65
CAPNS1-213ENST00000592354 LCE4AQ5TA78 99 aa4.75□□□□□ -1.65
CAPNS1-213ENST00000592354 KRTAP4-3Q9BYR4 195 aa4.75□□□□□ -1.65
CAPNS1-213ENST00000592354 HMCN1Q96RW7 5635 aa4.72□□□□□ -1.65
CAPNS1-213ENST00000592354 KRTAP9-9Q9BYP9 154 aa4.69□□□□□ -1.66
CAPNS1-213ENST00000592354 KRTAP9-4Q9BYQ2 154 aa4.69□□□□□ -1.66
CAPNS1-213ENST00000592354 KRTAP5-4Q6L8H1 288 aa4.65□□□□□ -1.67
CAPNS1-213ENST00000592354 H3BS24 57 aa4.61□□□□□ -1.67
CAPNS1-213ENST00000592354 KRTAP25-1Q3LHN0 102 aa4.61□□□□□ -1.67
CAPNS1-213ENST00000592354 CDC42SE1Q9NRR8 79 aa4.61□□□□□ -1.67
CAPNS1-213ENST00000592354 KRTAP4-7Q9BYR0 210 aa4.6□□□□□ -1.67
CAPNS1-213ENST00000592354 AHNAK2Q8IVF2 5795 aa4.6□□□□□ -1.67
CAPNS1-213ENST00000592354 KRTAP5-10Q6L8G5 202 aa4.55□□□□□ -1.68
CAPNS1-213ENST00000592354 KRTAP12-3P60328 96 aa4.54□□□□□ -1.68
CAPNS1-213ENST00000592354 ROMO1P60602 79 aa4.5□□□□□ -1.69
CAPNS1-213ENST00000592354 KRTAP19-4Q3LI73 84 aa4.46□□□□□ -1.7
CAPNS1-213ENST00000592354 KRTAP20-2Q3LI61 65 aa4.42□□□□□ -1.7
CAPNS1-213ENST00000592354 KRTAP5-3Q6L8H2 238 aa4.42□□□□□ -1.7
CAPNS1-213ENST00000592354 KRTAP5-5Q701N2 237 aaPredicted RBP4.42□□□□□ -1.7
CAPNS1-213ENST00000592354 KRTAP23-1A1A580 65 aa4.4□□□□□ -1.71
CAPNS1-213ENST00000592354 KRTAP5-7Q6L8G8 165 aa4.38□□□□□ -1.71
CAPNS1-213ENST00000592354 BRK1Q8WUW1 75 aa4.38□□□□□ -1.71
CAPNS1-213ENST00000592354 SPRR5A0A1B0GTR4 108 aa4.35□□□□□ -1.71
CAPNS1-213ENST00000592354 KRTAP12-4P60329 112 aa4.32□□□□□ -1.72
CAPNS1-213ENST00000592354 KRTAP15-1Q3LI76 137 aa4.3□□□□□ -1.72
CAPNS1-213ENST00000592354 KRTAP4-2Q9BYR5 136 aa4.23□□□□□ -1.73
CAPNS1-213ENST00000592354 SYNE1Q8NF91 8797 aaKnown RBP4.22□□□□□ -1.73
CAPNS1-213ENST00000592354 KRTAP4-11Q9BYQ6 195 aa4.21□□□□□ -1.74
CAPNS1-213ENST00000592354 PRO0628Q9UI54 55 aa4.2□□□□□ -1.74
CAPNS1-213ENST00000592354 LCE3CQ5T5A8 94 aa4.18□□□□□ -1.74
CAPNS1-213ENST00000592354 PMAIP1Q13794 54 aa4.1□□□□□ -1.75
CAPNS1-213ENST00000592354 KRTAP6-1Q3LI64 71 aa4.07□□□□□ -1.76
CAPNS1-213ENST00000592354 MT1AP04731 61 aa4.06□□□□□ -1.76
CAPNS1-213ENST00000592354 KRTAP5-2Q701N4 177 aa4.06□□□□□ -1.76
CAPNS1-213ENST00000592354 KRTAP9-6A8MVA2 160 aa3.98□□□□□ -1.77
CAPNS1-213ENST00000592354 PRAC1Q96KF2 57 aa3.97□□□□□ -1.77
CAPNS1-213ENST00000592354 KRTAP5-8O75690 187 aa3.93□□□□□ -1.78
CAPNS1-213ENST00000592354 KRTAP6-2Q3LI66 62 aa3.92□□□□□ -1.78
CAPNS1-213ENST00000592354 AHNAKQ09666 5890 aaKnown RBP3.87□□□□□ -1.79
CAPNS1-213ENST00000592354 OBSCNQ5VST9 7968 aa3.86□□□□□ -1.79
CAPNS1-213ENST00000592354 MUC5ACP98088 5654 aa3.86□□□□□ -1.79
CAPNS1-213ENST00000592354 KTN1-AS1Q86SY8 53 aa3.82□□□□□ -1.8
CAPNS1-213ENST00000592354 MUC5BQ9HC84 5762 aaPredicted RBP3.75□□□□□ -1.81
CAPNS1-213ENST00000592354 MT3P25713 68 aa3.7□□□□□ -1.82
CAPNS1-213ENST00000592354 KRTAP5-1Q6L8H4 278 aa3.67□□□□□ -1.82
CAPNS1-213ENST00000592354 LCE1EQ5T753 118 aa3.42□□□□□ -1.86
CAPNS1-213ENST00000592354 LCE1BQ5T7P3 118 aa3.3□□□□□ -1.88
CAPNS1-213ENST00000592354 LUZP6Q538Z0 58 aa3.24□□□□□ -1.89
CAPNS1-213ENST00000592354 LCE1CQ5T751 118 aa3.18□□□□□ -1.9
CAPNS1-213ENST00000592354 LCE3DQ9BYE3 92 aa3.05□□□□□ -1.92
CAPNS1-213ENST00000592354 NDUFAF8A1L188 74 aa3□□□□□ -1.93
CAPNS1-213ENST00000592354 A0A0A0MQY5 61 aa2.91□□□□□ -1.94
CAPNS1-213ENST00000592354 LCE3EQ5T5B0 92 aa2.91□□□□□ -1.94
CAPNS1-213ENST00000592354 KRTAP5-11Q6L8G4 156 aa2.91□□□□□ -1.94
CAPNS1-213ENST00000592354 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.87□□□□□ -1.95
CAPNS1-213ENST00000592354 LCE1FQ5T754 118 aa2.83□□□□□ -1.96
CAPNS1-213ENST00000592354 PHGR1C9JFL3 82 aa2.68□□□□□ -1.98
CAPNS1-213ENST00000592354 KRTAP21-2Q3LI59 83 aa2.66□□□□□ -1.98
CAPNS1-213ENST00000592354 INE1O15225 51 aa2.58□□□□□ -2
CAPNS1-213ENST00000592354 KRTAP4-4Q9BYR3 166 aa2.52□□□□□ -2.01
CAPNS1-213ENST00000592354 MUC19Q7Z5P9 8384 aa2.37□□□□□ -2.03
CAPNS1-213ENST00000592354 PRM1P04553 51 aa2.34□□□□□ -2.03
CAPNS1-213ENST00000592354 KRTAP21-1Q3LI58 79 aa2.01□□□□□ -2.09
CAPNS1-213ENST00000592354 MUC16Q8WXI7 14507 aa1.69□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 12.3 ms