RNA–Protein interactions for RNA: ENST00000592354.5

CAPNS1-213, Transcript of calpain small subunit 1, humanhuman

TSL 2

Gene CAPNS1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-213ENST00000592354 SF3B4Q15427 424 aaKnown RBP eCLIP12.26□□□□□ -0.451e-11■■■■■ 33.4
CAPNS1-213ENST00000592354 PABPC4Q13310 644 aaKnown RBP eCLIP16.42■□□□□ 0.225e-11■■□□□ 13.1
CAPNS1-213ENST00000592354 RPS3P23396 243 aaKnown RBP eCLIP12.93□□□□□ -0.342e-9■■■■■ 31.7
CAPNS1-213ENST00000592354 AQRO60306 1485 aaKnown RBP eCLIP24.53■■□□□ 1.528e-9■□□□□ 10.5
CAPNS1-213ENST00000592354 G3BP1Q13283 466 aaKnown RBP eCLIP16.65■□□□□ 0.261e-8■■■■■ 40.6
CAPNS1-213ENST00000592354 EFTUD2Q15029 972 aaKnown RBP eCLIP12.57□□□□□ -0.44e-8■■■■■ 41.9
CAPNS1-213ENST00000592354 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.81■□□□□ 0.282e-7■□□□□ 8.1
CAPNS1-213ENST00000592354 PPIGQ13427 754 aaKnown RBP eCLIP15.8■□□□□ 0.122e-7■□□□□ 8.5
CAPNS1-213ENST00000592354 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.3■□□□□ 0.23e-7■■■□□ 15.9
CAPNS1-213ENST00000592354 YBX3P16989 372 aaKnown RBP eCLIP18.37■□□□□ 0.537e-7■■■□□ 19
CAPNS1-213ENST00000592354 SND1Q7KZF4 910 aaKnown RBP eCLIP13.89□□□□□ -0.197e-7■■□□□ 11.5
CAPNS1-213ENST00000592354 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.62□□□□□ -0.551e-6■■■■□ 25.3
CAPNS1-213ENST00000592354 SUB1P53999 127 aaKnown RBP eCLIP9.89□□□□□ -0.833e-6■■■□□ 17
CAPNS1-213ENST00000592354 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.82■□□□□ 0.124e-6■□□□□ 9.2
CAPNS1-213ENST00000592354 FXR2P51116 673 aaKnown RBP eCLIP14.9□□□□□ -0.025e-6■■□□□ 12.9
CAPNS1-213ENST00000592354 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.82□□□□□ -0.366e-6■■■■■ 47.7
CAPNS1-213ENST00000592354 LARP4Q71RC2 724 aaKnown RBP eCLIP12.26□□□□□ -0.457e-6■□□□□ 9
Retrieved 17 of 17 RNA–protein pairs in 4.1 ms