RNA–Protein interactions for RNA: ENST00000592342.5

DNMT1-227, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-227ENST00000592342 RIMBP3CA6NJZ7 1639 aa34.26■■■■□ 3.07
DNMT1-227ENST00000592342 RIMBP3BA6NNM3 1639 aa34.26■■■■□ 3.07
DNMT1-227ENST00000592342 RIMBP3Q9UFD9 1639 aa34.26■■■■□ 3.07
DNMT1-227ENST00000592342 JPH4Q96JJ6 628 aa34.24■■■■□ 3.07
DNMT1-227ENST00000592342 SHROOM2Q13796 1616 aa34.19■■■■□ 3.06
DNMT1-227ENST00000592342 KIF21BO75037 1637 aa34.15■■■■□ 3.06
DNMT1-227ENST00000592342 IQGAP2Q13576 1575 aa34.15■■■■□ 3.06
DNMT1-227ENST00000592342 PRG4Q92954 1404 aaPredicted RBP34.14■■■■□ 3.06
DNMT1-227ENST00000592342 EHMT2Q96KQ7 1210 aa34.11■■■■□ 3.05
DNMT1-227ENST00000592342 CTTNBP2Q8WZ74 1663 aa34.09■■■■□ 3.05
DNMT1-227ENST00000592342 ERCC6L2Q5T890 1561 aa34.06■■■■□ 3.04
DNMT1-227ENST00000592342 CYB5RLQ6IPT4 315 aa34.05■■■■□ 3.04
DNMT1-227ENST00000592342 GOLGA3Q08378 1498 aa34.04■■■■□ 3.04
DNMT1-227ENST00000592342 ARAP1Q96P48 1450 aa34.03■■■■□ 3.04
DNMT1-227ENST00000592342 UBTFP17480 764 aaKnown RBP34.01■■■■□ 3.03
DNMT1-227ENST00000592342 CARMIL2Q6F5E8 1435 aa33.99■■■■□ 3.03
DNMT1-227ENST00000592342 UGGT2Q9NYU1 1516 aa33.95■■■■□ 3.03
DNMT1-227ENST00000592342 DISP1Q96F81 1524 aa33.86■■■■□ 3.01
DNMT1-227ENST00000592342 RANGAP1P46060 587 aaPredicted RBP33.86■■■■□ 3.01
DNMT1-227ENST00000592342 TTBK1Q5TCY1 1321 aaPredicted RBP33.85■■■■□ 3.01
DNMT1-227ENST00000592342 TNIKQ9UKE5 1360 aa33.83■■■■□ 3.01
DNMT1-227ENST00000592342 KIAA0556O60303 1618 aa33.82■■■■□ 3
DNMT1-227ENST00000592342 PTPRGP23470 1445 aa33.79■■■■□ 3
DNMT1-227ENST00000592342 P3H3Q8IVL6 736 aa33.73■■■□□ 2.99
DNMT1-227ENST00000592342 SAMD9Q5K651 1589 aa33.66■■■□□ 2.98
DNMT1-227ENST00000592342 EFCAB5A4FU69 1503 aa33.62■■■□□ 2.97
DNMT1-227ENST00000592342 LOC105371045A0A1W2PR82 267 aa33.58■■■□□ 2.97
DNMT1-227ENST00000592342 UACAQ9BZF9 1416 aa33.56■■■□□ 2.96
DNMT1-227ENST00000592342 FHOD3Q2V2M9 1422 aa33.55■■■□□ 2.96
DNMT1-227ENST00000592342 NPM1P06748 294 aaKnown RBP eCLIP33.55■■■□□ 2.96
DNMT1-227ENST00000592342 ADCY10Q96PN6 1610 aa33.51■■■□□ 2.96
DNMT1-227ENST00000592342 ARHGAP35Q9NRY4 1499 aa33.49■■■□□ 2.95
DNMT1-227ENST00000592342 UHRF1BP1LA0JNW5 1464 aa33.47■■■□□ 2.95
DNMT1-227ENST00000592342 PLB1Q6P1J6 1458 aa33.47■■■□□ 2.95
DNMT1-227ENST00000592342 ABCC2Q92887 1545 aa33.46■■■□□ 2.95
DNMT1-227ENST00000592342 CLIP1P30622 1438 aa33.45■■■□□ 2.94
DNMT1-227ENST00000592342 ABCA8O94911 1581 aa33.4■■■□□ 2.94
DNMT1-227ENST00000592342 CEP162Q5TB80 1403 aa33.36■■■□□ 2.93
DNMT1-227ENST00000592342 FMN1Q68DA7 1419 aa33.35■■■□□ 2.93
DNMT1-227ENST00000592342 RAPGEF6Q8TEU7 1601 aa33.32■■■□□ 2.92
DNMT1-227ENST00000592342 TRHP20396 242 aaPredicted RBP33.32■■■□□ 2.92
DNMT1-227ENST00000592342 KDM5BQ9UGL1 1544 aa33.31■■■□□ 2.92
DNMT1-227ENST00000592342 ARID3CA6NKF2 412 aa33.28■■■□□ 2.92
DNMT1-227ENST00000592342 MAPKBP1O60336 1514 aa33.26■■■□□ 2.91
DNMT1-227ENST00000592342 ATP1B4Q9UN42 357 aaPredicted RBP33.25■■■□□ 2.91
DNMT1-227ENST00000592342 ZCCHC11Q5TAX3 1644 aaKnown RBP33.24■■■□□ 2.91
DNMT1-227ENST00000592342 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.22■■■□□ 2.91
DNMT1-227ENST00000592342 HNRNPUL2Q1KMD3 747 aaKnown RBP33.22■■■□□ 2.91
DNMT1-227ENST00000592342 NUP153P49790 1475 aaKnown RBP33.19■■■□□ 2.9
DNMT1-227ENST00000592342 ASXL2Q76L83 1435 aa33.18■■■□□ 2.9
DNMT1-227ENST00000592342 ATP10BO94823 1461 aa33.16■■■□□ 2.9
DNMT1-227ENST00000592342 HECW1Q76N89 1606 aa33.13■■■□□ 2.89
DNMT1-227ENST00000592342 ABCC10Q5T3U5 1492 aa33.09■■■□□ 2.89
DNMT1-227ENST00000592342 CASKIN1Q8WXD9 1431 aa33.09■■■□□ 2.89
DNMT1-227ENST00000592342 FAM69CQ0P6D2 419 aa33.08■■■□□ 2.89
DNMT1-227ENST00000592342 PCF11O94913 1555 aaKnown RBP33.07■■■□□ 2.88
DNMT1-227ENST00000592342 WDR7Q9Y4E6 1490 aa33.06■■■□□ 2.88
DNMT1-227ENST00000592342 EPRSP07814 1512 aaKnown RBP33.02■■■□□ 2.88
DNMT1-227ENST00000592342 FYCO1Q9BQS8 1478 aa33.02■■■□□ 2.88
DNMT1-227ENST00000592342 DIP2BQ9P265 1576 aa33.01■■■□□ 2.88
DNMT1-227ENST00000592342 KCNH8Q96L42 1107 aa33.01■■■□□ 2.87
DNMT1-227ENST00000592342 CDK13Q14004 1512 aaKnown RBP33.01■■■□□ 2.87
DNMT1-227ENST00000592342 PLEKHD1A6NEE1 506 aa33■■■□□ 2.87
DNMT1-227ENST00000592342 CDK11AQ9UQ88 783 aaPredicted RBP32.96■■■□□ 2.87
DNMT1-227ENST00000592342 KIF13AQ9H1H9 1805 aa32.95■■■□□ 2.87
DNMT1-227ENST00000592342 CCDC18Q5T9S5 1454 aa32.95■■■□□ 2.87
DNMT1-227ENST00000592342 VPS8Q8N3P4 1428 aa32.93■■■□□ 2.86
DNMT1-227ENST00000592342 GLI2P10070 1586 aa32.89■■■□□ 2.86
DNMT1-227ENST00000592342 LRRIQ1Q96JM4 1722 aa32.86■■■□□ 2.85
DNMT1-227ENST00000592342 TROQ12816 1431 aaPredicted RBP32.77■■■□□ 2.84
DNMT1-227ENST00000592342 CD109Q6YHK3 1445 aa32.75■■■□□ 2.83
DNMT1-227ENST00000592342 TSPOAP1O95153 1857 aa32.74■■■□□ 2.83
DNMT1-227ENST00000592342 MAP3K4Q9Y6R4 1608 aa32.74■■■□□ 2.83
DNMT1-227ENST00000592342 CFAP43Q8NDM7 1665 aa32.72■■■□□ 2.83
DNMT1-227ENST00000592342 ABCA9Q8IUA7 1624 aa32.7■■■□□ 2.83
DNMT1-227ENST00000592342 APLP2Q06481 763 aa32.7■■■□□ 2.83
DNMT1-227ENST00000592342 MTUS2Q5JR59 1369 aa32.69■■■□□ 2.82
DNMT1-227ENST00000592342 KIF14Q15058 1648 aa32.67■■■□□ 2.82
DNMT1-227ENST00000592342 TEX14Q8IWB6 1497 aa32.66■■■□□ 2.82
DNMT1-227ENST00000592342 MAGI3Q5TCQ9 1506 aa32.66■■■□□ 2.82
DNMT1-227ENST00000592342 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.65■■■□□ 2.822e-6■□□□□ 8.3
DNMT1-227ENST00000592342 TIAM1Q13009 1591 aa32.62■■■□□ 2.81
DNMT1-227ENST00000592342 PPRC1Q5VV67 1664 aaKnown RBP32.6■■■□□ 2.81
DNMT1-227ENST00000592342 TTC37Q6PGP7 1564 aa32.6■■■□□ 2.81
DNMT1-227ENST00000592342 EHBP1L1Q8N3D4 1523 aa32.57■■■□□ 2.8
DNMT1-227ENST00000592342 MAP3K1Q13233 1512 aa32.56■■■□□ 2.8
DNMT1-227ENST00000592342 PLCH2O75038 1416 aa32.5■■■□□ 2.79
DNMT1-227ENST00000592342 LRRC9Q6ZRR7 1453 aa32.49■■■□□ 2.79
DNMT1-227ENST00000592342 KANK4Q5T7N3 995 aaPredicted RBP32.47■■■□□ 2.79
DNMT1-227ENST00000592342 MYO5CQ9NQX4 1742 aa32.46■■■□□ 2.79
DNMT1-227ENST00000592342 KDM6BO15054 1643 aa32.45■■■□□ 2.79
DNMT1-227ENST00000592342 FANCAO15360 1455 aa32.45■■■□□ 2.79
DNMT1-227ENST00000592342 NEO1Q92859 1461 aa32.44■■■□□ 2.78
DNMT1-227ENST00000592342 PHLDB1Q86UU1 1377 aa32.44■■■□□ 2.78
DNMT1-227ENST00000592342 CCNB3Q8WWL7 1395 aa32.44■■■□□ 2.78
DNMT1-227ENST00000592342 EFCAB2Q5VUJ9 269 aa32.43■■■□□ 2.78
DNMT1-227ENST00000592342 ARHGAP5Q13017 1502 aa32.41■■■□□ 2.78
DNMT1-227ENST00000592342 SUPT6HQ7KZ85 1726 aaKnown RBP32.41■■■□□ 2.78
DNMT1-227ENST00000592342 ARAP3Q8WWN8 1544 aa32.4■■■□□ 2.78
DNMT1-227ENST00000592342 CFAP74Q9C0B2 1584 aa32.4■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms