RNA–Protein interactions for RNA: ENST00000592342.5

DNMT1-227, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-227ENST00000592342 NISCHQ9Y2I1 1504 aa49.62■■■■■ 5.53
DNMT1-227ENST00000592342 CCDC180Q9P1Z9 1646 aa43.94■■■■■ 4.62
DNMT1-227ENST00000592342 ABCC9O60706 1549 aa42.78■■■■■ 4.44
DNMT1-227ENST00000592342 DCAF8L2P0C7V8 631 aa41.52■■■■■ 4.24
DNMT1-227ENST00000592342 ZCCHC6Q5VYS8 1495 aaKnown RBP41.4■■■■■ 4.22
DNMT1-227ENST00000592342 NACADO15069 1562 aa41.27■■■■■ 4.2
DNMT1-227ENST00000592342 RB1CC1Q8TDY2 1594 aa41.26■■■■■ 4.2
DNMT1-227ENST00000592342 MYO15BQ96JP2 1530 aa41.09■■■■■ 4.17
DNMT1-227ENST00000592342 DCAF1Q9Y4B6 1507 aa41.03■■■■■ 4.16
DNMT1-227ENST00000592342 UNC13AQ9UPW8 1703 aa40.22■■■■■ 4.03
DNMT1-227ENST00000592342 SCRIBQ14160 1630 aa40.19■■■■■ 4.02
DNMT1-227ENST00000592342 PABPN1Q86U42 306 aaKnown RBP eCLIP40.06■■■■■ 4
DNMT1-227ENST00000592342 BICRAQ9NZM4 1560 aa39.92■■■■□ 3.98
DNMT1-227ENST00000592342 SHROOM4Q9ULL8 1493 aa39.57■■■■□ 3.93
DNMT1-227ENST00000592342 DNAJC5BQ9UF47 199 aa38.91■■■■□ 3.82
DNMT1-227ENST00000592342 EIF4G1Q04637 1599 aaKnown RBP38.9■■■■□ 3.82
DNMT1-227ENST00000592342 CC2D2AQ9P2K1 1620 aa38.66■■■■□ 3.78
DNMT1-227ENST00000592342 CECR2Q9BXF3 1484 aa38.63■■■■□ 3.77
DNMT1-227ENST00000592342 BAZ1AQ9NRL2 1556 aaPredicted RBP38.47■■■■□ 3.75
DNMT1-227ENST00000592342 SMARCA4P51532 1647 aa38.43■■■■□ 3.74
DNMT1-227ENST00000592342 MROH2BQ7Z745 1585 aa38.25■■■■□ 3.71
DNMT1-227ENST00000592342 ATAD2BQ9ULI0 1458 aa38.15■■■■□ 3.7
DNMT1-227ENST00000592342 SMARCA2P51531 1590 aa38.14■■■■□ 3.7
DNMT1-227ENST00000592342 NCAPD3P42695 1498 aa38.08■■■■□ 3.69
DNMT1-227ENST00000592342 PEG3Q9GZU2 1588 aa38.01■■■■□ 3.67
DNMT1-227ENST00000592342 RSF1Q96T23 1441 aaPredicted RBP37.95■■■■□ 3.67
DNMT1-227ENST00000592342 HMGXB3Q12766 1538 aa37.92■■■■□ 3.66
DNMT1-227ENST00000592342 BAZ1BQ9UIG0 1483 aaKnown RBP37.9■■■■□ 3.66
DNMT1-227ENST00000592342 WIZO95785 1651 aa37.85■■■■□ 3.65
DNMT1-227ENST00000592342 TOP2AP11388 1531 aaKnown RBP37.49■■■■□ 3.59
DNMT1-227ENST00000592342 SUPT5HO00267 1087 aaKnown RBP37.37■■■■□ 3.57
DNMT1-227ENST00000592342 NESP48681 1621 aa37.07■■■■□ 3.53
DNMT1-227ENST00000592342 CCDC88BA6NC98 1476 aa37.05■■■■□ 3.52
DNMT1-227ENST00000592342 LAMC3Q9Y6N6 1575 aa37.03■■■■□ 3.52
DNMT1-227ENST00000592342 CADPSQ9ULU8 1353 aa37.03■■■■□ 3.52
DNMT1-227ENST00000592342 ERCC6Q03468 1493 aa36.9■■■■□ 3.5
DNMT1-227ENST00000592342 CFTRP13569 1480 aa36.84■■■■□ 3.49
DNMT1-227ENST00000592342 PDS5BQ9NTI5 1447 aa36.83■■■■□ 3.49
DNMT1-227ENST00000592342 KIF21AQ7Z4S6 1674 aa36.61■■■■□ 3.45
DNMT1-227ENST00000592342 FANCD2Q9BXW9 1451 aa36.61■■■■□ 3.45
DNMT1-227ENST00000592342 CEP164Q9UPV0 1460 aa36.54■■■■□ 3.44
DNMT1-227ENST00000592342 PRDM2Q13029 1718 aa36.53■■■■□ 3.44
DNMT1-227ENST00000592342 THOC2Q8NI27 1593 aaKnown RBP36.4■■■■□ 3.42
DNMT1-227ENST00000592342 MRC2Q9UBG0 1479 aa36.4■■■■□ 3.42
DNMT1-227ENST00000592342 CUX2O14529 1486 aa36.31■■■■□ 3.4
DNMT1-227ENST00000592342 WDR62O43379 1518 aa36.23■■■■□ 3.39
DNMT1-227ENST00000592342 URB2Q14146 1524 aaKnown RBP36.18■■■■□ 3.38
DNMT1-227ENST00000592342 ABCC8Q09428 1581 aa36.08■■■■□ 3.37
DNMT1-227ENST00000592342 TOPBP1Q92547 1522 aa36.03■■■■□ 3.36
DNMT1-227ENST00000592342 DNMBPQ6XZF7 1577 aa36.02■■■■□ 3.36
DNMT1-227ENST00000592342 CUX1P39880 1505 aa35.86■■■■□ 3.33
DNMT1-227ENST00000592342 WRNQ14191 1432 aaPredicted RBP eCLIP35.82■■■■□ 3.32
DNMT1-227ENST00000592342 POLA1P09884 1462 aaPredicted RBP35.75■■■■□ 3.31
DNMT1-227ENST00000592342 IFT140Q96RY7 1462 aa35.75■■■■□ 3.31
DNMT1-227ENST00000592342 FGD5Q6ZNL6 1462 aa35.73■■■■□ 3.31
DNMT1-227ENST00000592342 SOGA1O94964 1423 aa35.66■■■■□ 3.3
DNMT1-227ENST00000592342 TOP2BQ02880 1626 aa35.65■■■■□ 3.3
DNMT1-227ENST00000592342 SYNJ1O43426 1573 aa35.64■■■■□ 3.3
DNMT1-227ENST00000592342 BIVM-ERCC5R4GMW8 1640 aa35.61■■■■□ 3.29
DNMT1-227ENST00000592342 RAD54L2Q9Y4B4 1467 aa35.61■■■■□ 3.29
DNMT1-227ENST00000592342 TARBP1Q13395 1621 aaKnown RBP35.57■■■■□ 3.28
DNMT1-227ENST00000592342 ZNF608Q9ULD9 1512 aaPredicted RBP35.53■■■■□ 3.28
DNMT1-227ENST00000592342 TDRD9Q8NDG6 1382 aaKnown RBP35.41■■■■□ 3.26
DNMT1-227ENST00000592342 AQRO60306 1485 aaKnown RBP eCLIP35.41■■■■□ 3.263e-10■■■■■ 30.3
DNMT1-227ENST00000592342 EIF4G3O43432 1585 aaKnown RBP35.4■■■■□ 3.26
DNMT1-227ENST00000592342 ABCA10Q8WWZ4 1543 aa35.37■■■■□ 3.25
DNMT1-227ENST00000592342 WDR97A6NE52 1622 aa35.33■■■■□ 3.25
DNMT1-227ENST00000592342 TRIM41Q8WV44 630 aa35.28■■■■□ 3.24
DNMT1-227ENST00000592342 GAPVD1Q14C86 1478 aa35.23■■■■□ 3.23
DNMT1-227ENST00000592342 GRIN2BQ13224 1484 aa35.18■■■■□ 3.22
DNMT1-227ENST00000592342 ABCA5Q8WWZ7 1642 aa35.17■■■■□ 3.22
DNMT1-227ENST00000592342 SNAPC4Q5SXM2 1469 aa35.09■■■■□ 3.21
DNMT1-227ENST00000592342 PBRM1Q86U86 1689 aa35.08■■■■□ 3.21
DNMT1-227ENST00000592342 KIF27Q86VH2 1401 aa35.06■■■■□ 3.2
DNMT1-227ENST00000592342 MAGI1Q96QZ7 1491 aaPredicted RBP35.04■■■■□ 3.2
DNMT1-227ENST00000592342 FBLN2P98095 1184 aa35.03■■■■□ 3.2
DNMT1-227ENST00000592342 CHIC1Q5VXU3 224 aa34.99■■■■□ 3.19
DNMT1-227ENST00000592342 ERICH3Q5RHP9 1530 aa34.96■■■■□ 3.19
DNMT1-227ENST00000592342 CHMP7Q8WUX9 453 aaPredicted RBP34.95■■■■□ 3.19
DNMT1-227ENST00000592342 OSCARQ8IYS5 282 aa34.94■■■■□ 3.18
DNMT1-227ENST00000592342 SYNJ2O15056 1496 aa34.9■■■■□ 3.18
DNMT1-227ENST00000592342 CHD1O14646 1710 aa34.87■■■■□ 3.17
DNMT1-227ENST00000592342 ADAMTS12P58397 1594 aa34.84■■■■□ 3.17
DNMT1-227ENST00000592342 FHAD1B1AJZ9 1412 aa34.84■■■■□ 3.17
DNMT1-227ENST00000592342 DNAJC5Q9H3Z4 198 aa34.83■■■■□ 3.17
DNMT1-227ENST00000592342 IGF1RP08069 1367 aa34.83■■■■□ 3.17
DNMT1-227ENST00000592342 RUSC2Q8N2Y8 1516 aa34.78■■■■□ 3.16
DNMT1-227ENST00000592342 GRIN2AQ12879 1464 aa34.71■■■■□ 3.15
DNMT1-227ENST00000592342 CUL7Q14999 1698 aa34.7■■■■□ 3.15
DNMT1-227ENST00000592342 CARMIL1Q5VZK9 1371 aa34.67■■■■□ 3.14
DNMT1-227ENST00000592342 EEA1Q15075 1411 aa34.59■■■■□ 3.13
DNMT1-227ENST00000592342 FAM9AQ8IZU1 332 aaPredicted RBP34.55■■■■□ 3.12
DNMT1-227ENST00000592342 CSRNP3Q8WYN3 585 aa34.53■■■■□ 3.12
DNMT1-227ENST00000592342 NUP160Q12769 1436 aa34.52■■■■□ 3.12
DNMT1-227ENST00000592342 CEP170Q5SW79 1584 aa34.5■■■■□ 3.11
DNMT1-227ENST00000592342 CLASP1Q7Z460 1538 aa34.5■■■■□ 3.11
DNMT1-227ENST00000592342 RAPGEF2Q9Y4G8 1499 aa34.49■■■■□ 3.11
DNMT1-227ENST00000592342 PRXQ9BXM0 1461 aa34.39■■■■□ 3.1
DNMT1-227ENST00000592342 ARHGEF11O15085 1522 aa34.3■■■■□ 3.08
DNMT1-227ENST00000592342 KIAA0586Q9BVV6 1533 aa34.3■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms