RNA–Protein interactions for RNA: ENST00000592299.5

SPHK1-210, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-210ENST00000592299 CTTNBP2Q8WZ74 1663 aa36.18■■■■□ 3.38
SPHK1-210ENST00000592299 GRIN2AQ12879 1464 aa36.16■■■■□ 3.38
SPHK1-210ENST00000592299 ARHGAP35Q9NRY4 1499 aa35.97■■■■□ 3.35
SPHK1-210ENST00000592299 IQGAP2Q13576 1575 aa35.94■■■■□ 3.34
SPHK1-210ENST00000592299 CEP170Q5SW79 1584 aa35.93■■■■□ 3.34
SPHK1-210ENST00000592299 CHD1O14646 1710 aa35.93■■■■□ 3.34
SPHK1-210ENST00000592299 KIAA0586Q9BVV6 1533 aa35.91■■■■□ 3.34
SPHK1-210ENST00000592299 ARAP1Q96P48 1450 aa35.9■■■■□ 3.34
SPHK1-210ENST00000592299 NUP160Q12769 1436 aa35.89■■■■□ 3.34
SPHK1-210ENST00000592299 P3H3Q8IVL6 736 aa35.87■■■■□ 3.33
SPHK1-210ENST00000592299 EFCAB5A4FU69 1503 aa35.85■■■■□ 3.33
SPHK1-210ENST00000592299 VPS8Q8N3P4 1428 aa35.84■■■■□ 3.33
SPHK1-210ENST00000592299 SAMD9Q5K651 1589 aa35.75■■■■□ 3.31
SPHK1-210ENST00000592299 FHOD3Q2V2M9 1422 aa35.75■■■■□ 3.31
SPHK1-210ENST00000592299 UGGT2Q9NYU1 1516 aa35.74■■■■□ 3.31
SPHK1-210ENST00000592299 JPH4Q96JJ6 628 aa35.67■■■■□ 3.3
SPHK1-210ENST00000592299 PPARGC1BQ86YN6 1023 aaKnown RBP35.6■■■■□ 3.29
SPHK1-210ENST00000592299 DISP1Q96F81 1524 aa35.59■■■■□ 3.29
SPHK1-210ENST00000592299 APLP2Q06481 763 aa35.58■■■■□ 3.29
SPHK1-210ENST00000592299 KIAA0556O60303 1618 aa35.57■■■■□ 3.28
SPHK1-210ENST00000592299 FMN1Q68DA7 1419 aa35.56■■■■□ 3.28
SPHK1-210ENST00000592299 CARMIL2Q6F5E8 1435 aa35.52■■■■□ 3.28
SPHK1-210ENST00000592299 ATP1B4Q9UN42 357 aaPredicted RBP35.48■■■■□ 3.27
SPHK1-210ENST00000592299 PCF11O94913 1555 aaKnown RBP35.48■■■■□ 3.27
SPHK1-210ENST00000592299 CLASP1Q7Z460 1538 aa35.47■■■■□ 3.27
SPHK1-210ENST00000592299 TTBK1Q5TCY1 1321 aaPredicted RBP35.47■■■■□ 3.27
SPHK1-210ENST00000592299 PRG4Q92954 1404 aaPredicted RBP35.46■■■■□ 3.27
SPHK1-210ENST00000592299 SHROOM2Q13796 1616 aa35.42■■■■□ 3.26
SPHK1-210ENST00000592299 CASKIN1Q8WXD9 1431 aa35.42■■■■□ 3.26
SPHK1-210ENST00000592299 FYCO1Q9BQS8 1478 aa35.41■■■■□ 3.26
SPHK1-210ENST00000592299 OSCARQ8IYS5 282 aa35.4■■■■□ 3.26
SPHK1-210ENST00000592299 TIAM1Q13009 1591 aa35.26■■■■□ 3.23
SPHK1-210ENST00000592299 KANK4Q5T7N3 995 aaPredicted RBP35.25■■■■□ 3.23
SPHK1-210ENST00000592299 ERCC6L2Q5T890 1561 aa35.25■■■■□ 3.23
SPHK1-210ENST00000592299 MAP3K1Q13233 1512 aa35.24■■■■□ 3.23
SPHK1-210ENST00000592299 TRIM26Q12899 539 aaPredicted RBP35.22■■■■□ 3.23
SPHK1-210ENST00000592299 HECW1Q76N89 1606 aa35.22■■■■□ 3.23
SPHK1-210ENST00000592299 PTPRGP23470 1445 aa35.21■■■■□ 3.23
SPHK1-210ENST00000592299 RAPGEF6Q8TEU7 1601 aa35.19■■■■□ 3.22
SPHK1-210ENST00000592299 CFAP43Q8NDM7 1665 aa35.19■■■■□ 3.22
SPHK1-210ENST00000592299 PLB1Q6P1J6 1458 aa35.17■■■■□ 3.22
SPHK1-210ENST00000592299 LRRIQ1Q96JM4 1722 aa35.17■■■■□ 3.22
SPHK1-210ENST00000592299 PCGF6Q9BYE7 350 aa35.15■■■■□ 3.22
SPHK1-210ENST00000592299 ARID3CA6NKF2 412 aa35.13■■■■□ 3.21
SPHK1-210ENST00000592299 CCDC18Q5T9S5 1454 aa35.12■■■■□ 3.21
SPHK1-210ENST00000592299 LRRC9Q6ZRR7 1453 aa35.1■■■■□ 3.21
SPHK1-210ENST00000592299 EPRSP07814 1512 aaKnown RBP35.1■■■■□ 3.21
SPHK1-210ENST00000592299 NUP153P49790 1475 aaKnown RBP35.09■■■■□ 3.21
SPHK1-210ENST00000592299 ABCA8O94911 1581 aa35.06■■■■□ 3.2
SPHK1-210ENST00000592299 CDK13Q14004 1512 aaKnown RBP35.05■■■■□ 3.2
SPHK1-210ENST00000592299 MTUS2Q5JR59 1369 aa35.01■■■■□ 3.2
SPHK1-210ENST00000592299 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.01■■■■□ 3.19
SPHK1-210ENST00000592299 HNRNPUL2Q1KMD3 747 aaKnown RBP35.01■■■■□ 3.19
SPHK1-210ENST00000592299 UACAQ9BZF9 1416 aa34.97■■■■□ 3.19
SPHK1-210ENST00000592299 MAGI3Q5TCQ9 1506 aa34.89■■■■□ 3.18
SPHK1-210ENST00000592299 EHBP1L1Q8N3D4 1523 aa34.89■■■■□ 3.18
SPHK1-210ENST00000592299 CDK11AQ9UQ88 783 aaPredicted RBP34.88■■■■□ 3.17
SPHK1-210ENST00000592299 ABCC2Q92887 1545 aa34.86■■■■□ 3.17
SPHK1-210ENST00000592299 ATP10BO94823 1461 aa34.85■■■■□ 3.17
SPHK1-210ENST00000592299 SUPT6HQ7KZ85 1726 aaKnown RBP34.79■■■■□ 3.16
SPHK1-210ENST00000592299 PHLDB1Q86UU1 1377 aa34.78■■■■□ 3.16
SPHK1-210ENST00000592299 UHRF1BP1LA0JNW5 1464 aa34.77■■■■□ 3.16
SPHK1-210ENST00000592299 ARHGEF11O15085 1522 aa34.77■■■■□ 3.16
SPHK1-210ENST00000592299 NCOA2Q15596 1464 aa34.75■■■■□ 3.15
SPHK1-210ENST00000592299 PLEKHD1A6NEE1 506 aa34.74■■■■□ 3.15
SPHK1-210ENST00000592299 TROQ12816 1431 aaPredicted RBP34.72■■■■□ 3.15
SPHK1-210ENST00000592299 RRBP1Q9P2E9 1410 aaKnown RBP34.69■■■■□ 3.14
SPHK1-210ENST00000592299 ADCY10Q96PN6 1610 aa34.68■■■■□ 3.14
SPHK1-210ENST00000592299 CCNB3Q8WWL7 1395 aa34.65■■■■□ 3.14
SPHK1-210ENST00000592299 KDM5BQ9UGL1 1544 aa34.64■■■■□ 3.14
SPHK1-210ENST00000592299 ZCCHC11Q5TAX3 1644 aaKnown RBP34.64■■■■□ 3.14
SPHK1-210ENST00000592299 RIMBP3CA6NJZ7 1639 aa34.63■■■■□ 3.13
SPHK1-210ENST00000592299 RIMBP3BA6NNM3 1639 aa34.63■■■■□ 3.13
SPHK1-210ENST00000592299 RIMBP3Q9UFD9 1639 aa34.63■■■■□ 3.13
SPHK1-210ENST00000592299 MYOM3Q5VTT5 1437 aa34.59■■■■□ 3.13
SPHK1-210ENST00000592299 KIF14Q15058 1648 aa34.57■■■■□ 3.12
SPHK1-210ENST00000592299 FGD6Q6ZV73 1430 aa34.56■■■■□ 3.12
SPHK1-210ENST00000592299 FAM50AQ14320 339 aaKnown RBP34.54■■■■□ 3.12
SPHK1-210ENST00000592299 CYB5RLQ6IPT4 315 aa34.53■■■■□ 3.12
SPHK1-210ENST00000592299 NPM1P06748 294 aaKnown RBP eCLIP34.5■■■■□ 3.11
SPHK1-210ENST00000592299 KCNH8Q96L42 1107 aa34.45■■■■□ 3.11
SPHK1-210ENST00000592299 ITGAEP38570 1179 aa34.44■■■■□ 3.1
SPHK1-210ENST00000592299 MIA2Q96PC5 1412 aa34.41■■■■□ 3.1
SPHK1-210ENST00000592299 ABCC10Q5T3U5 1492 aa34.41■■■■□ 3.1
SPHK1-210ENST00000592299 PTPN23Q9H3S7 1636 aa34.41■■■■□ 3.1
SPHK1-210ENST00000592299 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.39■■■■□ 3.1
SPHK1-210ENST00000592299 ITSN2Q9NZM3 1697 aa34.38■■■■□ 3.09
SPHK1-210ENST00000592299 GPATCH8Q9UKJ3 1502 aaKnown RBP34.38■■■■□ 3.09
SPHK1-210ENST00000592299 WDR7Q9Y4E6 1490 aa34.36■■■■□ 3.09
SPHK1-210ENST00000592299 CFDP1Q9UEE9 299 aaPredicted RBP34.35■■■■□ 3.09
SPHK1-210ENST00000592299 ASXL2Q76L83 1435 aa34.34■■■■□ 3.09
SPHK1-210ENST00000592299 CDC42BPAQ5VT25 1732 aa34.33■■■■□ 3.09
SPHK1-210ENST00000592299 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.32■■■■□ 3.08
SPHK1-210ENST00000592299 TCOF1Q13428 1488 aaKnown RBP34.31■■■■□ 3.08
SPHK1-210ENST00000592299 TTC37Q6PGP7 1564 aa34.3■■■■□ 3.08
SPHK1-210ENST00000592299 ZNF777Q9ULD5 760 aaPredicted RBP34.27■■■■□ 3.08
SPHK1-210ENST00000592299 ZNF644Q9H582 1327 aaPredicted RBP34.25■■■■□ 3.07
SPHK1-210ENST00000592299 PREX2Q70Z35 1606 aa34.2■■■■□ 3.07
SPHK1-210ENST00000592299 MYO5CQ9NQX4 1742 aa34.19■■■■□ 3.06
SPHK1-210ENST00000592299 CAMSAP2Q08AD1 1489 aa34.19■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms