RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 RRBP1Q9P2E9 1410 aaKnown RBP29.64■■■□□ 2.33
MBD3-209ENST00000592012 TIAM1Q13009 1591 aa29.61■■■□□ 2.33
MBD3-209ENST00000592012 P3H3Q8IVL6 736 aa29.61■■■□□ 2.33
MBD3-209ENST00000592012 EFCAB5A4FU69 1503 aa29.61■■■□□ 2.33
MBD3-209ENST00000592012 MRC2Q9UBG0 1479 aa29.58■■■□□ 2.33
MBD3-209ENST00000592012 FHOD3Q2V2M9 1422 aa29.55■■■□□ 2.32
MBD3-209ENST00000592012 PCF11O94913 1555 aaKnown RBP29.52■■■□□ 2.32
MBD3-209ENST00000592012 CCNB3Q8WWL7 1395 aa29.51■■■□□ 2.31
MBD3-209ENST00000592012 LRRC9Q6ZRR7 1453 aa29.51■■■□□ 2.31
MBD3-209ENST00000592012 AQRO60306 1485 aaKnown RBP eCLIP29.46■■■□□ 2.317e-7■■■□□ 18.2
MBD3-209ENST00000592012 CASKIN1Q8WXD9 1431 aa29.45■■■□□ 2.3
MBD3-209ENST00000592012 FYCO1Q9BQS8 1478 aa29.45■■■□□ 2.3
MBD3-209ENST00000592012 CFAP43Q8NDM7 1665 aa29.45■■■□□ 2.3
MBD3-209ENST00000592012 PBRM1Q86U86 1689 aa29.42■■■□□ 2.3
MBD3-209ENST00000592012 FMN1Q68DA7 1419 aa29.41■■■□□ 2.3
MBD3-209ENST00000592012 SAMD9Q5K651 1589 aa29.4■■■□□ 2.3
MBD3-209ENST00000592012 ATP1B4Q9UN42 357 aaPredicted RBP29.39■■■□□ 2.3
MBD3-209ENST00000592012 WDR62O43379 1518 aa29.39■■■□□ 2.29
MBD3-209ENST00000592012 IFT140Q96RY7 1462 aa29.35■■■□□ 2.29
MBD3-209ENST00000592012 PHLDB1Q86UU1 1377 aa29.35■■■□□ 2.29
MBD3-209ENST00000592012 GRIN2BQ13224 1484 aa29.33■■■□□ 2.29
MBD3-209ENST00000592012 SNAPC4Q5SXM2 1469 aa29.33■■■□□ 2.29
MBD3-209ENST00000592012 ADAMTS12P58397 1594 aa29.31■■■□□ 2.28
MBD3-209ENST00000592012 DHX57Q6P158 1386 aaKnown RBP29.3■■■□□ 2.28
MBD3-209ENST00000592012 ZNF608Q9ULD9 1512 aaPredicted RBP29.29■■■□□ 2.28
MBD3-209ENST00000592012 CLSPNQ9HAW4 1339 aa29.29■■■□□ 2.28
MBD3-209ENST00000592012 ITGAEP38570 1179 aa29.25■■■□□ 2.27
MBD3-209ENST00000592012 ERCC6Q03468 1493 aa29.22■■■□□ 2.27
MBD3-209ENST00000592012 IQGAP2Q13576 1575 aa29.18■■■□□ 2.26
MBD3-209ENST00000592012 ZNF316A6NFI3 1004 aaPredicted RBP29.16■■■□□ 2.26
MBD3-209ENST00000592012 LRRIQ1Q96JM4 1722 aa29.16■■■□□ 2.26
MBD3-209ENST00000592012 DIEXFQ68CQ4 756 aaKnown RBP29.15■■■□□ 2.26
MBD3-209ENST00000592012 FAM50AQ14320 339 aaKnown RBP29.14■■■□□ 2.26
MBD3-209ENST00000592012 THOC2Q8NI27 1593 aaKnown RBP29.13■■■□□ 2.25
MBD3-209ENST00000592012 MTUS2Q5JR59 1369 aa29.11■■■□□ 2.25
MBD3-209ENST00000592012 RAB3GAP2Q9H2M9 1393 aa29.11■■■□□ 2.25
MBD3-209ENST00000592012 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.1■■■□□ 2.253e-7■□□□□ 9.3
MBD3-209ENST00000592012 EIF4G3O43432 1585 aaKnown RBP29.1■■■□□ 2.25
MBD3-209ENST00000592012 SETD5Q9C0A6 1442 aa29.06■■■□□ 2.24
MBD3-209ENST00000592012 UGGT2Q9NYU1 1516 aa29.05■■■□□ 2.24
MBD3-209ENST00000592012 FGD6Q6ZV73 1430 aa29.02■■■□□ 2.24
MBD3-209ENST00000592012 KIAA0586Q9BVV6 1533 aa29.02■■■□□ 2.24
MBD3-209ENST00000592012 GRIN2AQ12879 1464 aa29■■■□□ 2.23
MBD3-209ENST00000592012 CCDC18Q5T9S5 1454 aa28.99■■■□□ 2.23
MBD3-209ENST00000592012 NCOA2Q15596 1464 aa28.98■■■□□ 2.23
MBD3-209ENST00000592012 EHBP1L1Q8N3D4 1523 aa28.97■■■□□ 2.23
MBD3-209ENST00000592012 HECW1Q76N89 1606 aa28.96■■■□□ 2.23
MBD3-209ENST00000592012 MAGI1Q96QZ7 1491 aaPredicted RBP28.96■■■□□ 2.23
MBD3-209ENST00000592012 SUPT6HQ7KZ85 1726 aaKnown RBP28.95■■■□□ 2.22
MBD3-209ENST00000592012 MAGI3Q5TCQ9 1506 aa28.93■■■□□ 2.22
MBD3-209ENST00000592012 MYOM3Q5VTT5 1437 aa28.92■■■□□ 2.22
MBD3-209ENST00000592012 EPRSP07814 1512 aaKnown RBP28.91■■■□□ 2.22
MBD3-209ENST00000592012 DISP1Q96F81 1524 aa28.91■■■□□ 2.22
MBD3-209ENST00000592012 MAPKBP1O60336 1514 aa28.9■■■□□ 2.22
MBD3-209ENST00000592012 ARHGEF11O15085 1522 aa28.89■■■□□ 2.22
MBD3-209ENST00000592012 KIAA0556O60303 1618 aa28.88■■■□□ 2.21
MBD3-209ENST00000592012 SYNJ2O15056 1496 aa28.88■■■□□ 2.21
MBD3-209ENST00000592012 CHMP7Q8WUX9 453 aaPredicted RBP28.87■■■□□ 2.21
MBD3-209ENST00000592012 CDK13Q14004 1512 aaKnown RBP28.82■■■□□ 2.2
MBD3-209ENST00000592012 PTPRKQ15262 1439 aa28.82■■■□□ 2.2
MBD3-209ENST00000592012 CEP170Q5SW79 1584 aa28.8■■■□□ 2.2
MBD3-209ENST00000592012 PTPN23Q9H3S7 1636 aa28.77■■■□□ 2.2
MBD3-209ENST00000592012 FBLN2P98095 1184 aa28.76■■■□□ 2.19
MBD3-209ENST00000592012 HFM1A2PYH4 1435 aa28.74■■■□□ 2.19
MBD3-209ENST00000592012 ARID3CA6NKF2 412 aa28.74■■■□□ 2.19
MBD3-209ENST00000592012 NUP160Q12769 1436 aa28.73■■■□□ 2.19
MBD3-209ENST00000592012 NUP153P49790 1475 aaKnown RBP28.71■■■□□ 2.19
MBD3-209ENST00000592012 TCOF1Q13428 1488 aaKnown RBP28.71■■■□□ 2.19
MBD3-209ENST00000592012 RAPGEF6Q8TEU7 1601 aa28.7■■■□□ 2.18
MBD3-209ENST00000592012 JPH4Q96JJ6 628 aa28.67■■■□□ 2.18
MBD3-209ENST00000592012 NAIPQ13075 1403 aa28.66■■■□□ 2.18
MBD3-209ENST00000592012 MIA2Q96PC5 1412 aa28.66■■■□□ 2.18
MBD3-209ENST00000592012 SIN3AQ96ST3 1273 aa28.65■■■□□ 2.18
MBD3-209ENST00000592012 CARMIL2Q6F5E8 1435 aa28.61■■■□□ 2.17
MBD3-209ENST00000592012 MIER1Q8N108 512 aa28.59■■■□□ 2.17
MBD3-209ENST00000592012 UACAQ9BZF9 1416 aa28.59■■■□□ 2.17
MBD3-209ENST00000592012 CDK11AQ9UQ88 783 aaPredicted RBP28.59■■■□□ 2.17
MBD3-209ENST00000592012 NEUROD1Q13562 356 aa28.58■■■□□ 2.17
MBD3-209ENST00000592012 TIMELESSQ9UNS1 1208 aa28.58■■■□□ 2.17
MBD3-209ENST00000592012 PLB1Q6P1J6 1458 aa28.57■■■□□ 2.16
MBD3-209ENST00000592012 CHIC2Q9UKJ5 165 aa28.52■■■□□ 2.16
MBD3-209ENST00000592012 RRP7BPQ9NSQ0 103 aa28.51■■■□□ 2.15
MBD3-209ENST00000592012 AKNAQ7Z591 1439 aa28.5■■■□□ 2.15
MBD3-209ENST00000592012 TROQ12816 1431 aaPredicted RBP28.48■■■□□ 2.15
MBD3-209ENST00000592012 PRG4Q92954 1404 aaPredicted RBP28.48■■■□□ 2.15
MBD3-209ENST00000592012 GCC2Q8IWJ2 1684 aa28.47■■■□□ 2.15
MBD3-209ENST00000592012 ACIN1Q9UKV3 1341 aaKnown RBP28.46■■■□□ 2.15
MBD3-209ENST00000592012 CENPBP07199 599 aaPredicted RBP28.42■■■□□ 2.14
MBD3-209ENST00000592012 SCAF1Q9H7N4 1312 aaKnown RBP28.42■■■□□ 2.14
MBD3-209ENST00000592012 PPP1R15AO75807 674 aaPredicted RBP28.41■■■□□ 2.14
MBD3-209ENST00000592012 ZNF644Q9H582 1327 aaPredicted RBP28.41■■■□□ 2.14
MBD3-209ENST00000592012 ABCA8O94911 1581 aa28.4■■■□□ 2.14
MBD3-209ENST00000592012 DAPK1P53355 1430 aa28.4■■■□□ 2.14
MBD3-209ENST00000592012 ABCC5O15440 1437 aa28.38■■■□□ 2.13
MBD3-209ENST00000592012 DNMT1P26358 1616 aaKnown RBP28.37■■■□□ 2.13
MBD3-209ENST00000592012 KDM6BO15054 1643 aa28.37■■■□□ 2.13
MBD3-209ENST00000592012 ADCY10Q96PN6 1610 aa28.37■■■□□ 2.13
MBD3-209ENST00000592012 ROCK1Q13464 1354 aa28.36■■■□□ 2.13
MBD3-209ENST00000592012 GPATCH8Q9UKJ3 1502 aaKnown RBP28.34■■■□□ 2.13
MBD3-209ENST00000592012 KIF14Q15058 1648 aa28.34■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms