RNA–Protein interactions for RNA: ENST00000591115.5

PTPN2-210, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 1,648 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-210ENST00000591115 EHMT2Q96KQ7 1210 aa15.79■□□□□ 0.12
PTPN2-210ENST00000591115 GRIN2AQ12879 1464 aa15.78■□□□□ 0.12
PTPN2-210ENST00000591115 PIAS4Q8N2W9 510 aaPredicted RBP15.78■□□□□ 0.12
PTPN2-210ENST00000591115 CTTNBP2Q8WZ74 1663 aa15.76■□□□□ 0.11
PTPN2-210ENST00000591115 CEP170Q5SW79 1584 aa15.74■□□□□ 0.11
PTPN2-210ENST00000591115 CEP162Q5TB80 1403 aa15.74■□□□□ 0.11
PTPN2-210ENST00000591115 FBLN2P98095 1184 aa15.73■□□□□ 0.11
PTPN2-210ENST00000591115 UBTFP17480 764 aaKnown RBP15.72■□□□□ 0.11
PTPN2-210ENST00000591115 CHMP7Q8WUX9 453 aaPredicted RBP15.72■□□□□ 0.11
PTPN2-210ENST00000591115 TRIM26Q12899 539 aaPredicted RBP15.68■□□□□ 0.1
PTPN2-210ENST00000591115 NUP160Q12769 1436 aa15.68■□□□□ 0.1
PTPN2-210ENST00000591115 PCGF6Q9BYE7 350 aa15.65■□□□□ 0.1
PTPN2-210ENST00000591115 IQGAP2Q13576 1575 aa15.64■□□□□ 0.09
PTPN2-210ENST00000591115 CLASP1Q7Z460 1538 aa15.63■□□□□ 0.09
PTPN2-210ENST00000591115 KIAA0586Q9BVV6 1533 aa15.6■□□□□ 0.09
PTPN2-210ENST00000591115 CLIP1P30622 1438 aa15.58■□□□□ 0.09
PTPN2-210ENST00000591115 SHROOM2Q13796 1616 aa15.57■□□□□ 0.08
PTPN2-210ENST00000591115 RANGAP1P46060 587 aaPredicted RBP15.54■□□□□ 0.08
PTPN2-210ENST00000591115 SAMD9Q5K651 1589 aa15.53■□□□□ 0.08
PTPN2-210ENST00000591115 UGGT2Q9NYU1 1516 aa15.53■□□□□ 0.08
PTPN2-210ENST00000591115 OSCARQ8IYS5 282 aa15.52■□□□□ 0.08
PTPN2-210ENST00000591115 KIAA0556O60303 1618 aa15.5■□□□□ 0.07
PTPN2-210ENST00000591115 ERCC6L2Q5T890 1561 aa15.5■□□□□ 0.07
PTPN2-210ENST00000591115 VPS8Q8N3P4 1428 aa15.49■□□□□ 0.07
PTPN2-210ENST00000591115 EFCAB5A4FU69 1503 aa15.49■□□□□ 0.07
PTPN2-210ENST00000591115 DISP1Q96F81 1524 aa15.48■□□□□ 0.07
PTPN2-210ENST00000591115 ARHGAP35Q9NRY4 1499 aa15.48■□□□□ 0.07
PTPN2-210ENST00000591115 PPP6R1Q9UPN7 881 aa15.46■□□□□ 0.06
PTPN2-210ENST00000591115 PRG4Q92954 1404 aaPredicted RBP15.45■□□□□ 0.06
PTPN2-210ENST00000591115 ARAP1Q96P48 1450 aa15.44■□□□□ 0.06
PTPN2-210ENST00000591115 JPH4Q96JJ6 628 aa15.43■□□□□ 0.06
PTPN2-210ENST00000591115 FHOD3Q2V2M9 1422 aa15.43■□□□□ 0.06
PTPN2-210ENST00000591115 HRCP23327 699 aa15.42■□□□□ 0.06
PTPN2-210ENST00000591115 PLPPR3Q6T4P5 718 aa15.4■□□□□ 0.06
PTPN2-210ENST00000591115 ARHGEF11O15085 1522 aa15.4■□□□□ 0.06
PTPN2-210ENST00000591115 CARMIL2Q6F5E8 1435 aa15.4■□□□□ 0.06
PTPN2-210ENST00000591115 P3H3Q8IVL6 736 aa15.39■□□□□ 0.05
PTPN2-210ENST00000591115 RIMBP3CA6NJZ7 1639 aa15.38■□□□□ 0.05
PTPN2-210ENST00000591115 RIMBP3BA6NNM3 1639 aa15.38■□□□□ 0.05
PTPN2-210ENST00000591115 RIMBP3Q9UFD9 1639 aa15.38■□□□□ 0.05
PTPN2-210ENST00000591115 ADRA2BP18089 450 aa15.35■□□□□ 0.05
PTPN2-210ENST00000591115 PCF11O94913 1555 aaKnown RBP15.35■□□□□ 0.05
PTPN2-210ENST00000591115 PPARGC1BQ86YN6 1023 aaKnown RBP15.35■□□□□ 0.05
PTPN2-210ENST00000591115 TTBK1Q5TCY1 1321 aaPredicted RBP15.33■□□□□ 0.05
PTPN2-210ENST00000591115 APLP2Q06481 763 aa15.33■□□□□ 0.04
PTPN2-210ENST00000591115 LRRIQ1Q96JM4 1722 aa15.3■□□□□ 0.04
PTPN2-210ENST00000591115 RAPGEF6Q8TEU7 1601 aa15.29■□□□□ 0.04
PTPN2-210ENST00000591115 FMN1Q68DA7 1419 aa15.29■□□□□ 0.04
PTPN2-210ENST00000591115 PLB1Q6P1J6 1458 aa15.29■□□□□ 0.04
PTPN2-210ENST00000591115 PTPRGP23470 1445 aa15.28■□□□□ 0.04
PTPN2-210ENST00000591115 ABCA8O94911 1581 aa15.28■□□□□ 0.04
PTPN2-210ENST00000591115 HECW1Q76N89 1606 aa15.26■□□□□ 0.03
PTPN2-210ENST00000591115 ADCY10Q96PN6 1610 aa15.26■□□□□ 0.03
PTPN2-210ENST00000591115 FYCO1Q9BQS8 1478 aa15.25■□□□□ 0.03
PTPN2-210ENST00000591115 MAP3K1Q13233 1512 aa15.24■□□□□ 0.03
PTPN2-210ENST00000591115 CASKIN1Q8WXD9 1431 aa15.23■□□□□ 0.03
PTPN2-210ENST00000591115 ABCC2Q92887 1545 aa15.23■□□□□ 0.03
PTPN2-210ENST00000591115 NUP153P49790 1475 aaKnown RBP15.22■□□□□ 0.03
PTPN2-210ENST00000591115 CFAP43Q8NDM7 1665 aa15.22■□□□□ 0.03
PTPN2-210ENST00000591115 ZEB1P37275 1124 aaPredicted RBP15.21■□□□□ 0.02
PTPN2-210ENST00000591115 UACAQ9BZF9 1416 aa15.21■□□□□ 0.02
PTPN2-210ENST00000591115 CDK13Q14004 1512 aaKnown RBP15.19■□□□□ 0.02
PTPN2-210ENST00000591115 ZCCHC11Q5TAX3 1644 aaKnown RBP15.18■□□□□ 0.02
PTPN2-210ENST00000591115 DNAJC5Q9H3Z4 198 aa15.17■□□□□ 0.02
PTPN2-210ENST00000591115 UHRF1BP1LA0JNW5 1464 aa15.17■□□□□ 0.02
PTPN2-210ENST00000591115 ARID3CA6NKF2 412 aa15.17■□□□□ 0.02
PTPN2-210ENST00000591115 EPRSP07814 1512 aaKnown RBP15.17■□□□□ 0.02
PTPN2-210ENST00000591115 TIAM1Q13009 1591 aa15.16■□□□□ 0.02
PTPN2-210ENST00000591115 ATP1B4Q9UN42 357 aaPredicted RBP15.16■□□□□ 0.02
PTPN2-210ENST00000591115 CYB5RLQ6IPT4 315 aa15.14■□□□□ 0.01
PTPN2-210ENST00000591115 CCDC18Q5T9S5 1454 aa15.14■□□□□ 0.01
PTPN2-210ENST00000591115 KDM5BQ9UGL1 1544 aa15.12■□□□□ 0.01
PTPN2-210ENST00000591115 KANK4Q5T7N3 995 aaPredicted RBP15.11■□□□□ 0.01
PTPN2-210ENST00000591115 ATP10BO94823 1461 aa15.11■□□□□ 0.01
PTPN2-210ENST00000591115 MAGI3Q5TCQ9 1506 aa15.11■□□□□ 0.01
PTPN2-210ENST00000591115 RRBP1Q9P2E9 1410 aaKnown RBP15.07■□□□□ 0
PTPN2-210ENST00000591115 LRRC9Q6ZRR7 1453 aa15.07■□□□□ 0
PTPN2-210ENST00000591115 EHBP1L1Q8N3D4 1523 aa15.05■□□□□ -0
PTPN2-210ENST00000591115 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.04■□□□□ -0
PTPN2-210ENST00000591115 HNRNPUL2Q1KMD3 747 aaKnown RBP15.04■□□□□ -0
PTPN2-210ENST00000591115 KIF14Q15058 1648 aa15.04■□□□□ -0
PTPN2-210ENST00000591115 MAPKBP1O60336 1514 aa15.02■□□□□ -0
PTPN2-210ENST00000591115 ASXL2Q76L83 1435 aa15.01□□□□□ -0.01
PTPN2-210ENST00000591115 SUPT6HQ7KZ85 1726 aaKnown RBP15□□□□□ -0.01
PTPN2-210ENST00000591115 WDR7Q9Y4E6 1490 aa15□□□□□ -0.01
PTPN2-210ENST00000591115 TROQ12816 1431 aaPredicted RBP15□□□□□ -0.01
PTPN2-210ENST00000591115 MTUS2Q5JR59 1369 aa14.99□□□□□ -0.01
PTPN2-210ENST00000591115 CCNB3Q8WWL7 1395 aa14.99□□□□□ -0.01
PTPN2-210ENST00000591115 CCER1Q8TC90 406 aaPredicted RBP14.99□□□□□ -0.01
PTPN2-210ENST00000591115 TTC37Q6PGP7 1564 aa14.98□□□□□ -0.01
PTPN2-210ENST00000591115 NPM1P06748 294 aaKnown RBP eCLIP14.97□□□□□ -0.01
PTPN2-210ENST00000591115 NCOA2Q15596 1464 aa14.94□□□□□ -0.02
PTPN2-210ENST00000591115 DIP2BQ9P265 1576 aa14.94□□□□□ -0.02
PTPN2-210ENST00000591115 CDK11AQ9UQ88 783 aaPredicted RBP14.94□□□□□ -0.02
PTPN2-210ENST00000591115 KIF13AQ9H1H9 1805 aa14.94□□□□□ -0.02
PTPN2-210ENST00000591115 CDC42BPAQ5VT25 1732 aa14.93□□□□□ -0.02
PTPN2-210ENST00000591115 PLEKHD1A6NEE1 506 aa14.93□□□□□ -0.02
PTPN2-210ENST00000591115 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.93□□□□□ -0.02
PTPN2-210ENST00000591115 ABCA9Q8IUA7 1624 aa14.92□□□□□ -0.02
PTPN2-210ENST00000591115 MYO5CQ9NQX4 1742 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms