RNA–Protein interactions for RNA: ENST00000590941.5

RUNDC3A-206, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-206ENST00000590941 FHAD1B1AJZ9 1412 aa39.97■■■■□ 3.99
RUNDC3A-206ENST00000590941 ADAMTS12P58397 1594 aa39.94■■■■□ 3.98
RUNDC3A-206ENST00000590941 ZEB1P37275 1124 aaPredicted RBP39.94■■■■□ 3.98
RUNDC3A-206ENST00000590941 MAP3K1Q13233 1512 aa39.92■■■■□ 3.98
RUNDC3A-206ENST00000590941 AQRO60306 1485 aaKnown RBP eCLIP39.87■■■■□ 3.97
RUNDC3A-206ENST00000590941 TTBK1Q5TCY1 1321 aaPredicted RBP39.87■■■■□ 3.97
RUNDC3A-206ENST00000590941 EIF4G3O43432 1585 aaKnown RBP39.78■■■■□ 3.96
RUNDC3A-206ENST00000590941 SAMD9Q5K651 1589 aa39.77■■■■□ 3.96
RUNDC3A-206ENST00000590941 ZNF608Q9ULD9 1512 aaPredicted RBP39.76■■■■□ 3.96
RUNDC3A-206ENST00000590941 TIAM1Q13009 1591 aa39.71■■■■□ 3.95
RUNDC3A-206ENST00000590941 FMN1Q68DA7 1419 aa39.71■■■■□ 3.95
RUNDC3A-206ENST00000590941 FYCO1Q9BQS8 1478 aa39.7■■■■□ 3.95
RUNDC3A-206ENST00000590941 PCF11O94913 1555 aaKnown RBP39.67■■■■□ 3.94
RUNDC3A-206ENST00000590941 FHOD3Q2V2M9 1422 aa39.65■■■■□ 3.94
RUNDC3A-206ENST00000590941 CFAP43Q8NDM7 1665 aa39.65■■■■□ 3.94
RUNDC3A-206ENST00000590941 MAGI1Q96QZ7 1491 aaPredicted RBP39.64■■■■□ 3.94
RUNDC3A-206ENST00000590941 CASKIN1Q8WXD9 1431 aa39.63■■■■□ 3.93
RUNDC3A-206ENST00000590941 IQGAP2Q13576 1575 aa39.63■■■■□ 3.93
RUNDC3A-206ENST00000590941 SNAPC4Q5SXM2 1469 aa39.6■■■■□ 3.93
RUNDC3A-206ENST00000590941 KANK4Q5T7N3 995 aaPredicted RBP39.55■■■■□ 3.92
RUNDC3A-206ENST00000590941 RRBP1Q9P2E9 1410 aaKnown RBP39.5■■■■□ 3.91
RUNDC3A-206ENST00000590941 GRIN2AQ12879 1464 aa39.5■■■■□ 3.91
RUNDC3A-206ENST00000590941 LRRC9Q6ZRR7 1453 aa39.5■■■■□ 3.91
RUNDC3A-206ENST00000590941 P3H3Q8IVL6 736 aa39.5■■■■□ 3.91
RUNDC3A-206ENST00000590941 UGGT2Q9NYU1 1516 aa39.46■■■■□ 3.91
RUNDC3A-206ENST00000590941 KIAA0586Q9BVV6 1533 aa39.45■■■■□ 3.91
RUNDC3A-206ENST00000590941 SYNJ2O15056 1496 aa39.45■■■■□ 3.91
RUNDC3A-206ENST00000590941 CCER1Q8TC90 406 aaPredicted RBP39.37■■■■□ 3.89
RUNDC3A-206ENST00000590941 CCNB3Q8WWL7 1395 aa39.29■■■■□ 3.88
RUNDC3A-206ENST00000590941 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP39.29■■■■□ 3.88
RUNDC3A-206ENST00000590941 CCDC18Q5T9S5 1454 aa39.25■■■■□ 3.87
RUNDC3A-206ENST00000590941 HNRNPUL2Q1KMD3 747 aaKnown RBP39.24■■■■□ 3.87
RUNDC3A-206ENST00000590941 HECW1Q76N89 1606 aa39.23■■■■□ 3.87
RUNDC3A-206ENST00000590941 CHMP7Q8WUX9 453 aaPredicted RBP39.23■■■■□ 3.87
RUNDC3A-206ENST00000590941 ATP1B4Q9UN42 357 aaPredicted RBP39.22■■■■□ 3.87
RUNDC3A-206ENST00000590941 KIAA0556O60303 1618 aa39.2■■■■□ 3.87
RUNDC3A-206ENST00000590941 NUP160Q12769 1436 aa39.18■■■■□ 3.86
RUNDC3A-206ENST00000590941 CEP170Q5SW79 1584 aa39.17■■■■□ 3.86
RUNDC3A-206ENST00000590941 LRRIQ1Q96JM4 1722 aa39.12■■■■□ 3.85
RUNDC3A-206ENST00000590941 EHBP1L1Q8N3D4 1523 aa39.11■■■■□ 3.85
RUNDC3A-206ENST00000590941 DISP1Q96F81 1524 aa39.11■■■■□ 3.85
RUNDC3A-206ENST00000590941 MTUS2Q5JR59 1369 aa39.08■■■■□ 3.85
RUNDC3A-206ENST00000590941 PHLDB1Q86UU1 1377 aa39.07■■■■□ 3.84
RUNDC3A-206ENST00000590941 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP39.05■■■■□ 3.84
RUNDC3A-206ENST00000590941 SUPT6HQ7KZ85 1726 aaKnown RBP39.01■■■■□ 3.84
RUNDC3A-206ENST00000590941 CARMIL2Q6F5E8 1435 aa38.98■■■■□ 3.83
RUNDC3A-206ENST00000590941 EPRSP07814 1512 aaKnown RBP38.97■■■■□ 3.83
RUNDC3A-206ENST00000590941 FBLN2P98095 1184 aa38.96■■■■□ 3.83
RUNDC3A-206ENST00000590941 RAPGEF6Q8TEU7 1601 aa38.9■■■■□ 3.82
RUNDC3A-206ENST00000590941 NCOA2Q15596 1464 aa38.87■■■■□ 3.81
RUNDC3A-206ENST00000590941 CLSPNQ9HAW4 1339 aa38.86■■■■□ 3.81
RUNDC3A-206ENST00000590941 FGD6Q6ZV73 1430 aa38.86■■■■□ 3.81
RUNDC3A-206ENST00000590941 ARHGEF11O15085 1522 aa38.85■■■■□ 3.81
RUNDC3A-206ENST00000590941 JPH4Q96JJ6 628 aa38.82■■■■□ 3.81
RUNDC3A-206ENST00000590941 MYOM3Q5VTT5 1437 aa38.81■■■■□ 3.8
RUNDC3A-206ENST00000590941 CHD1O14646 1710 aa38.78■■■■□ 3.8
RUNDC3A-206ENST00000590941 MAGI3Q5TCQ9 1506 aa38.78■■■■□ 3.8
RUNDC3A-206ENST00000590941 FAM50AQ14320 339 aaKnown RBP38.75■■■■□ 3.79
RUNDC3A-206ENST00000590941 NUP153P49790 1475 aaKnown RBP38.75■■■■□ 3.79
RUNDC3A-206ENST00000590941 CDK13Q14004 1512 aaKnown RBP38.74■■■■□ 3.79
RUNDC3A-206ENST00000590941 CDK11AQ9UQ88 783 aaPredicted RBP38.68■■■■□ 3.78
RUNDC3A-206ENST00000590941 DHX57Q6P158 1386 aaKnown RBP38.67■■■■□ 3.78
RUNDC3A-206ENST00000590941 SETD5Q9C0A6 1442 aa38.66■■■■□ 3.78
RUNDC3A-206ENST00000590941 ITGAEP38570 1179 aa38.65■■■■□ 3.78
RUNDC3A-206ENST00000590941 MIA2Q96PC5 1412 aa38.62■■■■□ 3.77
RUNDC3A-206ENST00000590941 PTPN23Q9H3S7 1636 aa38.62■■■■□ 3.77
RUNDC3A-206ENST00000590941 TCOF1Q13428 1488 aaKnown RBP38.61■■■■□ 3.77
RUNDC3A-206ENST00000590941 SHROOM2Q13796 1616 aa38.6■■■■□ 3.77
RUNDC3A-206ENST00000590941 ABCA8O94911 1581 aa38.59■■■■□ 3.77
RUNDC3A-206ENST00000590941 RAB3GAP2Q9H2M9 1393 aa38.58■■■■□ 3.77
RUNDC3A-206ENST00000590941 PLB1Q6P1J6 1458 aa38.56■■■■□ 3.76
RUNDC3A-206ENST00000590941 PRG4Q92954 1404 aaPredicted RBP38.55■■■■□ 3.76
RUNDC3A-206ENST00000590941 TROQ12816 1431 aaPredicted RBP38.5■■■■□ 3.75
RUNDC3A-206ENST00000590941 ADCY10Q96PN6 1610 aa38.48■■■■□ 3.75
RUNDC3A-206ENST00000590941 PTPRGP23470 1445 aa38.41■■■■□ 3.74
RUNDC3A-206ENST00000590941 HFM1A2PYH4 1435 aa38.41■■■■□ 3.74
RUNDC3A-206ENST00000590941 ITSN2Q9NZM3 1697 aa38.39■■■■□ 3.74
RUNDC3A-206ENST00000590941 CLASP1Q7Z460 1538 aa38.38■■■■□ 3.73
RUNDC3A-206ENST00000590941 AKNAQ7Z591 1439 aa38.36■■■■□ 3.73
RUNDC3A-206ENST00000590941 ARID3CA6NKF2 412 aa38.35■■■■□ 3.73
RUNDC3A-206ENST00000590941 PTPRKQ15262 1439 aa38.29■■■■□ 3.72
RUNDC3A-206ENST00000590941 ATP10BO94823 1461 aa38.29■■■■□ 3.72
RUNDC3A-206ENST00000590941 KIF14Q15058 1648 aa38.27■■■■□ 3.72
RUNDC3A-206ENST00000590941 GCC2Q8IWJ2 1684 aa38.24■■■■□ 3.71
RUNDC3A-206ENST00000590941 UACAQ9BZF9 1416 aa38.24■■■■□ 3.71
RUNDC3A-206ENST00000590941 PLEKHD1A6NEE1 506 aa38.23■■■■□ 3.71
RUNDC3A-206ENST00000590941 MAPKBP1O60336 1514 aa38.22■■■■□ 3.71
RUNDC3A-206ENST00000590941 NAIPQ13075 1403 aa38.22■■■■□ 3.71
RUNDC3A-206ENST00000590941 ACIN1Q9UKV3 1341 aaKnown RBP38.21■■■■□ 3.71
RUNDC3A-206ENST00000590941 DNMT1P26358 1616 aaKnown RBP38.2■■■■□ 3.71
RUNDC3A-206ENST00000590941 GPATCH8Q9UKJ3 1502 aaKnown RBP38.15■■■■□ 3.7
RUNDC3A-206ENST00000590941 ABCC2Q92887 1545 aa38.14■■■■□ 3.7
RUNDC3A-206ENST00000590941 ROCK1Q13464 1354 aa38.13■■■■□ 3.69
RUNDC3A-206ENST00000590941 DAPK1P53355 1430 aa38.12■■■■□ 3.69
RUNDC3A-206ENST00000590941 ABCC10Q5T3U5 1492 aa38.1■■■■□ 3.69
RUNDC3A-206ENST00000590941 CAMSAP2Q08AD1 1489 aa38.07■■■■□ 3.69
RUNDC3A-206ENST00000590941 ERCC6L2Q5T890 1561 aa38.06■■■■□ 3.68
RUNDC3A-206ENST00000590941 ZNF316A6NFI3 1004 aaPredicted RBP38.06■■■■□ 3.68
RUNDC3A-206ENST00000590941 CFDP1Q9UEE9 299 aaPredicted RBP38.06■■■■□ 3.68
RUNDC3A-206ENST00000590941 UHRF1BP1LA0JNW5 1464 aa38.04■■■■□ 3.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms