RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 JPH4Q96JJ6 628 aa15.24■□□□□ 0.03
VPS25-205ENST00000590339 NUP160Q12769 1436 aa15.24■□□□□ 0.03
VPS25-205ENST00000590339 CEP170Q5SW79 1584 aa15.23■□□□□ 0.03
VPS25-205ENST00000590339 GOLGA3Q08378 1498 aa15.19■□□□□ 0.02
VPS25-205ENST00000590339 ERCC6L2Q5T890 1561 aa15.18■□□□□ 0.02
VPS25-205ENST00000590339 CSRNP3Q8WYN3 585 aa15.17■□□□□ 0.02
VPS25-205ENST00000590339 PRG4Q92954 1404 aaPredicted RBP15.17■□□□□ 0.02
VPS25-205ENST00000590339 CARMIL1Q5VZK9 1371 aa15.16■□□□□ 0.02
VPS25-205ENST00000590339 TNIKQ9UKE5 1360 aa15.13■□□□□ 0.01
VPS25-205ENST00000590339 TTBK1Q5TCY1 1321 aaPredicted RBP15.12■□□□□ 0.01
VPS25-205ENST00000590339 PRXQ9BXM0 1461 aa15.11■□□□□ 0.01
VPS25-205ENST00000590339 KIAA0586Q9BVV6 1533 aa15.07■□□□□ 0
VPS25-205ENST00000590339 RAPGEF2Q9Y4G8 1499 aa15.07■□□□□ 0
VPS25-205ENST00000590339 CEP162Q5TB80 1403 aa15.06■□□□□ 0
VPS25-205ENST00000590339 SHROOM2Q13796 1616 aa15.06■□□□□ 0
VPS25-205ENST00000590339 NPM1P06748 294 aaKnown RBP eCLIP15.04■□□□□ -0
VPS25-205ENST00000590339 CUL7Q14999 1698 aa15.03■□□□□ -0
VPS25-205ENST00000590339 EHMT2Q96KQ7 1210 aa15□□□□□ -0.01
VPS25-205ENST00000590339 PTPRGP23470 1445 aa14.98□□□□□ -0.01
VPS25-205ENST00000590339 CARMIL2Q6F5E8 1435 aa14.95□□□□□ -0.02
VPS25-205ENST00000590339 FAM69CQ0P6D2 419 aa14.93□□□□□ -0.02
VPS25-205ENST00000590339 UBTFP17480 764 aaKnown RBP14.91□□□□□ -0.02
VPS25-205ENST00000590339 CLIP1P30622 1438 aa14.91□□□□□ -0.02
VPS25-205ENST00000590339 IQGAP2Q13576 1575 aa14.9□□□□□ -0.02
VPS25-205ENST00000590339 RANGAP1P46060 587 aaPredicted RBP14.86□□□□□ -0.03
VPS25-205ENST00000590339 P3H3Q8IVL6 736 aa14.86□□□□□ -0.03
VPS25-205ENST00000590339 DISP1Q96F81 1524 aa14.86□□□□□ -0.03
VPS25-205ENST00000590339 ADCY10Q96PN6 1610 aa14.84□□□□□ -0.03
VPS25-205ENST00000590339 CTTNBP2Q8WZ74 1663 aa14.84□□□□□ -0.03
VPS25-205ENST00000590339 VPS8Q8N3P4 1428 aa14.83□□□□□ -0.04
VPS25-205ENST00000590339 UACAQ9BZF9 1416 aa14.83□□□□□ -0.04
VPS25-205ENST00000590339 UGGT2Q9NYU1 1516 aa14.82□□□□□ -0.04
VPS25-205ENST00000590339 ABCC10Q5T3U5 1492 aa14.81□□□□□ -0.04
VPS25-205ENST00000590339 MAPKBP1O60336 1514 aa14.78□□□□□ -0.04
VPS25-205ENST00000590339 ABCC2Q92887 1545 aa14.77□□□□□ -0.04
VPS25-205ENST00000590339 ARHGAP35Q9NRY4 1499 aa14.77□□□□□ -0.04
VPS25-205ENST00000590339 ARID3CA6NKF2 412 aa14.77□□□□□ -0.05
VPS25-205ENST00000590339 TRIM26Q12899 539 aaPredicted RBP14.77□□□□□ -0.05
VPS25-205ENST00000590339 ASXL2Q76L83 1435 aa14.75□□□□□ -0.05
VPS25-205ENST00000590339 KIAA0556O60303 1618 aa14.75□□□□□ -0.05
VPS25-205ENST00000590339 UHRF1BP1LA0JNW5 1464 aa14.75□□□□□ -0.05
VPS25-205ENST00000590339 PLB1Q6P1J6 1458 aa14.74□□□□□ -0.05
VPS25-205ENST00000590339 EFCAB5A4FU69 1503 aa14.73□□□□□ -0.05
VPS25-205ENST00000590339 KCNH8Q96L42 1107 aa14.73□□□□□ -0.05
VPS25-205ENST00000590339 PCGF6Q9BYE7 350 aa14.73□□□□□ -0.05
VPS25-205ENST00000590339 DIP2BQ9P265 1576 aa14.71□□□□□ -0.05
VPS25-205ENST00000590339 KIF13AQ9H1H9 1805 aa14.71□□□□□ -0.06
VPS25-205ENST00000590339 AEBP2Q6ZN18 517 aaPredicted RBP14.7□□□□□ -0.06
VPS25-205ENST00000590339 SAMD9Q5K651 1589 aa14.69□□□□□ -0.06
VPS25-205ENST00000590339 KDM5BQ9UGL1 1544 aa14.69□□□□□ -0.06
VPS25-205ENST00000590339 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.68□□□□□ -0.06
VPS25-205ENST00000590339 HNRNPUL2Q1KMD3 747 aaKnown RBP14.68□□□□□ -0.06
VPS25-205ENST00000590339 EPRSP07814 1512 aaKnown RBP14.64□□□□□ -0.07
VPS25-205ENST00000590339 CFAP43Q8NDM7 1665 aa14.62□□□□□ -0.07
VPS25-205ENST00000590339 ABCA8O94911 1581 aa14.62□□□□□ -0.07
VPS25-205ENST00000590339 TSPOAP1O95153 1857 aa14.62□□□□□ -0.07
VPS25-205ENST00000590339 ZCCHC11Q5TAX3 1644 aaKnown RBP14.62□□□□□ -0.07
VPS25-205ENST00000590339 MAP3K1Q13233 1512 aa14.61□□□□□ -0.07
VPS25-205ENST00000590339 PCF11O94913 1555 aaKnown RBP14.61□□□□□ -0.07
VPS25-205ENST00000590339 FHOD3Q2V2M9 1422 aa14.61□□□□□ -0.07
VPS25-205ENST00000590339 ATP1B4Q9UN42 357 aaPredicted RBP14.6□□□□□ -0.07
VPS25-205ENST00000590339 WDR7Q9Y4E6 1490 aa14.6□□□□□ -0.07
VPS25-205ENST00000590339 ATP10BO94823 1461 aa14.59□□□□□ -0.07
VPS25-205ENST00000590339 GLI2P10070 1586 aa14.58□□□□□ -0.08
VPS25-205ENST00000590339 TIAM1Q13009 1591 aa14.57□□□□□ -0.08
VPS25-205ENST00000590339 KDM6BO15054 1643 aa14.56□□□□□ -0.08
VPS25-205ENST00000590339 CD109Q6YHK3 1445 aa14.56□□□□□ -0.08
VPS25-205ENST00000590339 FYCO1Q9BQS8 1478 aa14.56□□□□□ -0.08
VPS25-205ENST00000590339 PPARGC1BQ86YN6 1023 aaKnown RBP14.55□□□□□ -0.08
VPS25-205ENST00000590339 PLEKHD1A6NEE1 506 aa14.54□□□□□ -0.08
VPS25-205ENST00000590339 COL17A1Q9UMD9 1497 aaPredicted RBP14.53□□□□□ -0.08
VPS25-205ENST00000590339 CASKIN1Q8WXD9 1431 aa14.52□□□□□ -0.08
VPS25-205ENST00000590339 TEX14Q8IWB6 1497 aa14.51□□□□□ -0.09
VPS25-205ENST00000590339 FMN1Q68DA7 1419 aa14.5□□□□□ -0.09
VPS25-205ENST00000590339 NUP153P49790 1475 aaKnown RBP14.5□□□□□ -0.09
VPS25-205ENST00000590339 LRRIQ1Q96JM4 1722 aa14.49□□□□□ -0.09
VPS25-205ENST00000590339 RAPGEF6Q8TEU7 1601 aa14.49□□□□□ -0.09
VPS25-205ENST00000590339 KDM4FA0A1W2PPD8 638 aa14.49□□□□□ -0.09
VPS25-205ENST00000590339 HRCP23327 699 aa14.49□□□□□ -0.09
VPS25-205ENST00000590339 PPRC1Q5VV67 1664 aaKnown RBP14.49□□□□□ -0.09
VPS25-205ENST00000590339 MAP3K4Q9Y6R4 1608 aa14.48□□□□□ -0.09
VPS25-205ENST00000590339 APLP2Q06481 763 aa14.47□□□□□ -0.09
VPS25-205ENST00000590339 MAGI3Q5TCQ9 1506 aa14.46□□□□□ -0.1
VPS25-205ENST00000590339 LRRC9Q6ZRR7 1453 aa14.44□□□□□ -0.1
VPS25-205ENST00000590339 HECW1Q76N89 1606 aa14.43□□□□□ -0.1
VPS25-205ENST00000590339 RRBP1Q9P2E9 1410 aaKnown RBP14.42□□□□□ -0.1
VPS25-205ENST00000590339 RAPGEF3O95398 923 aa14.42□□□□□ -0.1
VPS25-205ENST00000590339 KANK4Q5T7N3 995 aaPredicted RBP14.41□□□□□ -0.1
VPS25-205ENST00000590339 CDK11AQ9UQ88 783 aaPredicted RBP14.4□□□□□ -0.1
VPS25-205ENST00000590339 CDK13Q14004 1512 aaKnown RBP14.4□□□□□ -0.1
VPS25-205ENST00000590339 CCDC18Q5T9S5 1454 aa14.38□□□□□ -0.11
VPS25-205ENST00000590339 EHBP1L1Q8N3D4 1523 aa14.36□□□□□ -0.11
VPS25-205ENST00000590339 PHLDB1Q86UU1 1377 aa14.35□□□□□ -0.11
VPS25-205ENST00000590339 ABCA9Q8IUA7 1624 aa14.35□□□□□ -0.11
VPS25-205ENST00000590339 ARAP3Q8WWN8 1544 aa14.33□□□□□ -0.12
VPS25-205ENST00000590339 ADGRL1O94910 1474 aa14.32□□□□□ -0.12
VPS25-205ENST00000590339 NEO1Q92859 1461 aa14.31□□□□□ -0.12
VPS25-205ENST00000590339 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.31□□□□□ -0.12
VPS25-205ENST00000590339 SUPT6HQ7KZ85 1726 aaKnown RBP14.31□□□□□ -0.12
VPS25-205ENST00000590339 ARID4BQ4LE39 1312 aaPredicted RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms