RNA–Protein interactions for RNA: ENST00000590325.1

CALR-207, Transcript of calreticulin, humanhuman

TSL 2

Gene CALR, Length 781 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-207ENST00000590325 RIMBP3CA6NJZ7 1639 aa23.78■■□□□ 1.4
CALR-207ENST00000590325 RIMBP3BA6NNM3 1639 aa23.78■■□□□ 1.4
CALR-207ENST00000590325 RIMBP3Q9UFD9 1639 aa23.78■■□□□ 1.4
CALR-207ENST00000590325 JPH4Q96JJ6 628 aa23.78■■□□□ 1.4
CALR-207ENST00000590325 SHROOM2Q13796 1616 aa23.72■■□□□ 1.39
CALR-207ENST00000590325 PRG4Q92954 1404 aaPredicted RBP23.69■■□□□ 1.38
CALR-207ENST00000590325 ARAP1Q96P48 1450 aa23.68■■□□□ 1.38
CALR-207ENST00000590325 ERCC6L2Q5T890 1561 aa23.66■■□□□ 1.38
CALR-207ENST00000590325 CYB5RLQ6IPT4 315 aa23.66■■□□□ 1.38
CALR-207ENST00000590325 IQGAP2Q13576 1575 aa23.65■■□□□ 1.38
CALR-207ENST00000590325 KIF21BO75037 1637 aa23.62■■□□□ 1.37
CALR-207ENST00000590325 UGGT2Q9NYU1 1516 aa23.55■■□□□ 1.36
CALR-207ENST00000590325 EHMT2Q96KQ7 1210 aa23.55■■□□□ 1.36
CALR-207ENST00000590325 CARMIL2Q6F5E8 1435 aa23.53■■□□□ 1.36
CALR-207ENST00000590325 GOLGA3Q08378 1498 aa23.53■■□□□ 1.36
CALR-207ENST00000590325 CTTNBP2Q8WZ74 1663 aa23.52■■□□□ 1.36
CALR-207ENST00000590325 DISP1Q96F81 1524 aa23.52■■□□□ 1.36
CALR-207ENST00000590325 UBTFP17480 764 aaKnown RBP23.49■■□□□ 1.35
CALR-207ENST00000590325 TNIKQ9UKE5 1360 aa23.47■■□□□ 1.35
CALR-207ENST00000590325 PTPRGP23470 1445 aa23.44■■□□□ 1.34
CALR-207ENST00000590325 KIAA0556O60303 1618 aa23.41■■□□□ 1.34
CALR-207ENST00000590325 TTBK1Q5TCY1 1321 aaPredicted RBP23.41■■□□□ 1.34
CALR-207ENST00000590325 RANGAP1P46060 587 aaPredicted RBP23.4■■□□□ 1.34
CALR-207ENST00000590325 P3H3Q8IVL6 736 aa23.35■■□□□ 1.33
CALR-207ENST00000590325 SAMD9Q5K651 1589 aa23.32■■□□□ 1.32
CALR-207ENST00000590325 UACAQ9BZF9 1416 aa23.28■■□□□ 1.32
CALR-207ENST00000590325 EFCAB5A4FU69 1503 aa23.26■■□□□ 1.31
CALR-207ENST00000590325 ADCY10Q96PN6 1610 aa23.26■■□□□ 1.31
CALR-207ENST00000590325 LOC105371045A0A1W2PR82 267 aa23.25■■□□□ 1.31
CALR-207ENST00000590325 FHOD3Q2V2M9 1422 aa23.25■■□□□ 1.31
CALR-207ENST00000590325 UHRF1BP1LA0JNW5 1464 aa23.24■■□□□ 1.31
CALR-207ENST00000590325 PLB1Q6P1J6 1458 aa23.23■■□□□ 1.31
CALR-207ENST00000590325 NPM1P06748 294 aaKnown RBP eCLIP23.22■■□□□ 1.31
CALR-207ENST00000590325 ARHGAP35Q9NRY4 1499 aa23.21■■□□□ 1.31
CALR-207ENST00000590325 ABCC2Q92887 1545 aa23.2■■□□□ 1.3
CALR-207ENST00000590325 ABCA8O94911 1581 aa23.17■■□□□ 1.3
CALR-207ENST00000590325 CLIP1P30622 1438 aa23.13■■□□□ 1.29
CALR-207ENST00000590325 KDM5BQ9UGL1 1544 aa23.13■■□□□ 1.29
CALR-207ENST00000590325 MAPKBP1O60336 1514 aa23.09■■□□□ 1.29
CALR-207ENST00000590325 TRHP20396 242 aaPredicted RBP23.09■■□□□ 1.29
CALR-207ENST00000590325 CEP162Q5TB80 1403 aa23.08■■□□□ 1.28
CALR-207ENST00000590325 FMN1Q68DA7 1419 aa23.08■■□□□ 1.28
CALR-207ENST00000590325 ARID3CA6NKF2 412 aa23.05■■□□□ 1.28
CALR-207ENST00000590325 RAPGEF6Q8TEU7 1601 aa23.04■■□□□ 1.28
CALR-207ENST00000590325 ASXL2Q76L83 1435 aa23.04■■□□□ 1.28
CALR-207ENST00000590325 NUP153P49790 1475 aaKnown RBP23.03■■□□□ 1.28
CALR-207ENST00000590325 ATP10BO94823 1461 aa23.02■■□□□ 1.28
CALR-207ENST00000590325 ZCCHC11Q5TAX3 1644 aaKnown RBP23.01■■□□□ 1.27
CALR-207ENST00000590325 ABCC10Q5T3U5 1492 aa22.98■■□□□ 1.27
CALR-207ENST00000590325 FAM69CQ0P6D2 419 aa22.96■■□□□ 1.27
CALR-207ENST00000590325 ATP1B4Q9UN42 357 aaPredicted RBP22.95■■□□□ 1.26
CALR-207ENST00000590325 WDR7Q9Y4E6 1490 aa22.93■■□□□ 1.26
CALR-207ENST00000590325 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.93■■□□□ 1.26
CALR-207ENST00000590325 HNRNPUL2Q1KMD3 747 aaKnown RBP22.93■■□□□ 1.26
CALR-207ENST00000590325 CASKIN1Q8WXD9 1431 aa22.92■■□□□ 1.26
CALR-207ENST00000590325 DIP2BQ9P265 1576 aa22.91■■□□□ 1.26
CALR-207ENST00000590325 EPRSP07814 1512 aaKnown RBP22.89■■□□□ 1.26
CALR-207ENST00000590325 HECW1Q76N89 1606 aa22.88■■□□□ 1.25
CALR-207ENST00000590325 KCNH8Q96L42 1107 aa22.87■■□□□ 1.25
CALR-207ENST00000590325 CDK13Q14004 1512 aaKnown RBP22.87■■□□□ 1.25
CALR-207ENST00000590325 PCF11O94913 1555 aaKnown RBP22.86■■□□□ 1.25
CALR-207ENST00000590325 FYCO1Q9BQS8 1478 aa22.85■■□□□ 1.25
CALR-207ENST00000590325 PLEKHD1A6NEE1 506 aa22.85■■□□□ 1.25
CALR-207ENST00000590325 KIF13AQ9H1H9 1805 aa22.84■■□□□ 1.25
CALR-207ENST00000590325 GLI2P10070 1586 aa22.84■■□□□ 1.25
CALR-207ENST00000590325 CDK11AQ9UQ88 783 aaPredicted RBP22.79■■□□□ 1.24
CALR-207ENST00000590325 CCDC18Q5T9S5 1454 aa22.79■■□□□ 1.24
CALR-207ENST00000590325 VPS8Q8N3P4 1428 aa22.78■■□□□ 1.24
CALR-207ENST00000590325 LRRIQ1Q96JM4 1722 aa22.73■■□□□ 1.23
CALR-207ENST00000590325 CD109Q6YHK3 1445 aa22.72■■□□□ 1.23
CALR-207ENST00000590325 TROQ12816 1431 aaPredicted RBP22.71■■□□□ 1.23
CALR-207ENST00000590325 MAP3K4Q9Y6R4 1608 aa22.71■■□□□ 1.23
CALR-207ENST00000590325 ABCA9Q8IUA7 1624 aa22.66■■□□□ 1.22
CALR-207ENST00000590325 MAGI3Q5TCQ9 1506 aa22.66■■□□□ 1.22
CALR-207ENST00000590325 CFAP43Q8NDM7 1665 aa22.64■■□□□ 1.21
CALR-207ENST00000590325 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.63■■□□□ 1.216e-38■■□□□ 12
CALR-207ENST00000590325 PPRC1Q5VV67 1664 aaKnown RBP22.63■■□□□ 1.21
CALR-207ENST00000590325 TSPOAP1O95153 1857 aa22.62■■□□□ 1.21
CALR-207ENST00000590325 TEX14Q8IWB6 1497 aa22.62■■□□□ 1.21
CALR-207ENST00000590325 MTUS2Q5JR59 1369 aa22.59■■□□□ 1.21
CALR-207ENST00000590325 TTC37Q6PGP7 1564 aa22.59■■□□□ 1.21
CALR-207ENST00000590325 KIF14Q15058 1648 aa22.58■■□□□ 1.21
CALR-207ENST00000590325 TIAM1Q13009 1591 aa22.55■■□□□ 1.2
CALR-207ENST00000590325 PLCH2O75038 1416 aa22.55■■□□□ 1.2
CALR-207ENST00000590325 MAP3K1Q13233 1512 aa22.54■■□□□ 1.2
CALR-207ENST00000590325 EHBP1L1Q8N3D4 1523 aa22.52■■□□□ 1.19
CALR-207ENST00000590325 APLP2Q06481 763 aa22.51■■□□□ 1.19
CALR-207ENST00000590325 KANK4Q5T7N3 995 aaPredicted RBP22.51■■□□□ 1.19
CALR-207ENST00000590325 COL17A1Q9UMD9 1497 aaPredicted RBP22.51■■□□□ 1.19
CALR-207ENST00000590325 PHLDB1Q86UU1 1377 aa22.5■■□□□ 1.19
CALR-207ENST00000590325 LRRC9Q6ZRR7 1453 aa22.5■■□□□ 1.19
CALR-207ENST00000590325 NEO1Q92859 1461 aa22.5■■□□□ 1.19
CALR-207ENST00000590325 FANCAO15360 1455 aa22.48■■□□□ 1.19
CALR-207ENST00000590325 KDM6BO15054 1643 aa22.48■■□□□ 1.19
CALR-207ENST00000590325 EFCAB2Q5VUJ9 269 aa22.47■■□□□ 1.19
CALR-207ENST00000590325 ARAP3Q8WWN8 1544 aa22.47■■□□□ 1.19
CALR-207ENST00000590325 AKNAQ7Z591 1439 aa22.45■■□□□ 1.18
CALR-207ENST00000590325 CCNB3Q8WWL7 1395 aa22.44■■□□□ 1.18
CALR-207ENST00000590325 GPATCH8Q9UKJ3 1502 aaKnown RBP22.44■■□□□ 1.18
CALR-207ENST00000590325 NCOA2Q15596 1464 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms