RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 FAM69CQ0P6D2 419 aa23.23■■□□□ 1.31
PRKCSH-210ENST00000589990 ABCC10Q5T3U5 1492 aa23.22■■□□□ 1.31
PRKCSH-210ENST00000589990 RUSC2Q8N2Y8 1516 aa23.2■■□□□ 1.3
PRKCSH-210ENST00000589990 DIP2BQ9P265 1576 aa23.18■■□□□ 1.3
PRKCSH-210ENST00000589990 ADCY10Q96PN6 1610 aa23.17■■□□□ 1.3
PRKCSH-210ENST00000589990 MAPKBP1O60336 1514 aa23.14■■□□□ 1.3
PRKCSH-210ENST00000589990 KDM4FA0A1W2PPD8 638 aa23.14■■□□□ 1.29
PRKCSH-210ENST00000589990 KDM6BO15054 1643 aa23.08■■□□□ 1.29
PRKCSH-210ENST00000589990 NPM1P06748 294 aaKnown RBP eCLIP23.08■■□□□ 1.29
PRKCSH-210ENST00000589990 TSPOAP1O95153 1857 aa23.08■■□□□ 1.29
PRKCSH-210ENST00000589990 KIAA0586Q9BVV6 1533 aa22.97■■□□□ 1.27
PRKCSH-210ENST00000589990 ILDR1Q86SU0 546 aaPredicted RBP22.93■■□□□ 1.26
PRKCSH-210ENST00000589990 IGF1RP08069 1367 aa22.92■■□□□ 1.26
PRKCSH-210ENST00000589990 TTBK1Q5TCY1 1321 aaPredicted RBP22.91■■□□□ 1.26
PRKCSH-210ENST00000589990 PPRC1Q5VV67 1664 aaKnown RBP22.88■■□□□ 1.25
PRKCSH-210ENST00000589990 PTPRGP23470 1445 aa22.86■■□□□ 1.25
PRKCSH-210ENST00000589990 CUL7Q14999 1698 aa22.84■■□□□ 1.25
PRKCSH-210ENST00000589990 ABCC2Q92887 1545 aa22.82■■□□□ 1.24
PRKCSH-210ENST00000589990 ASXL2Q76L83 1435 aa22.81■■□□□ 1.24
PRKCSH-210ENST00000589990 ADGRL1O94910 1474 aa22.8■■□□□ 1.24
PRKCSH-210ENST00000589990 KIF27Q86VH2 1401 aa22.8■■□□□ 1.24
PRKCSH-210ENST00000589990 COL17A1Q9UMD9 1497 aaPredicted RBP22.79■■□□□ 1.24
PRKCSH-210ENST00000589990 GLI2P10070 1586 aa22.76■■□□□ 1.23
PRKCSH-210ENST00000589990 TNIKQ9UKE5 1360 aa22.76■■□□□ 1.23
PRKCSH-210ENST00000589990 PLB1Q6P1J6 1458 aa22.73■■□□□ 1.23
PRKCSH-210ENST00000589990 CARMIL1Q5VZK9 1371 aa22.73■■□□□ 1.23
PRKCSH-210ENST00000589990 CARMIL2Q6F5E8 1435 aa22.71■■□□□ 1.23
PRKCSH-210ENST00000589990 IQGAP2Q13576 1575 aa22.7■■□□□ 1.22
PRKCSH-210ENST00000589990 UHRF1BP1LA0JNW5 1464 aa22.69■■□□□ 1.22
PRKCSH-210ENST00000589990 EPRSP07814 1512 aaKnown RBP22.67■■□□□ 1.22
PRKCSH-210ENST00000589990 DISP1Q96F81 1524 aa22.67■■□□□ 1.22
PRKCSH-210ENST00000589990 UACAQ9BZF9 1416 aa22.67■■□□□ 1.22
PRKCSH-210ENST00000589990 MAP3K4Q9Y6R4 1608 aa22.67■■□□□ 1.22
PRKCSH-210ENST00000589990 HECW2Q9P2P5 1572 aa22.67■■□□□ 1.22
PRKCSH-210ENST00000589990 KDM5BQ9UGL1 1544 aa22.62■■□□□ 1.21
PRKCSH-210ENST00000589990 ZCCHC11Q5TAX3 1644 aaKnown RBP22.62■■□□□ 1.21
PRKCSH-210ENST00000589990 TEX14Q8IWB6 1497 aa22.54■■□□□ 1.2
PRKCSH-210ENST00000589990 UGGT2Q9NYU1 1516 aa22.53■■□□□ 1.2
PRKCSH-210ENST00000589990 KIAA0556O60303 1618 aa22.53■■□□□ 1.2
PRKCSH-210ENST00000589990 WDR7Q9Y4E6 1490 aa22.48■■□□□ 1.19
PRKCSH-210ENST00000589990 RAPGEF2Q9Y4G8 1499 aa22.45■■□□□ 1.18
PRKCSH-210ENST00000589990 CD109Q6YHK3 1445 aa22.4■■□□□ 1.18
PRKCSH-210ENST00000589990 KIF21BO75037 1637 aa22.39■■□□□ 1.18
PRKCSH-210ENST00000589990 KCNH8Q96L42 1107 aa22.39■■□□□ 1.17
PRKCSH-210ENST00000589990 MAGI3Q5TCQ9 1506 aa22.38■■□□□ 1.17
PRKCSH-210ENST00000589990 CFAP43Q8NDM7 1665 aa22.38■■□□□ 1.17
PRKCSH-210ENST00000589990 ABCA8O94911 1581 aa22.36■■□□□ 1.17
PRKCSH-210ENST00000589990 CTTNBP2Q8WZ74 1663 aa22.33■■□□□ 1.16
PRKCSH-210ENST00000589990 ARID3CA6NKF2 412 aa22.27■■□□□ 1.16
PRKCSH-210ENST00000589990 GOLGA3Q08378 1498 aa22.23■■□□□ 1.15
PRKCSH-210ENST00000589990 ARAP3Q8WWN8 1544 aa22.23■■□□□ 1.15
PRKCSH-210ENST00000589990 FBXO41Q8TF61 875 aa22.23■■□□□ 1.15
PRKCSH-210ENST00000589990 PTPRMP28827 1452 aa22.21■■□□□ 1.15
PRKCSH-210ENST00000589990 ADAMTSL3P82987 1691 aa22.2■■□□□ 1.15
PRKCSH-210ENST00000589990 ATP10BO94823 1461 aa22.17■■□□□ 1.14
PRKCSH-210ENST00000589990 RAPGEF3O95398 923 aa22.16■■□□□ 1.14
PRKCSH-210ENST00000589990 P3H3Q8IVL6 736 aa22.15■■□□□ 1.14
PRKCSH-210ENST00000589990 ABCA9Q8IUA7 1624 aa22.14■■□□□ 1.14
PRKCSH-210ENST00000589990 PRXQ9BXM0 1461 aa22.13■■□□□ 1.13
PRKCSH-210ENST00000589990 FRMPD1Q5SYB0 1578 aa22.12■■□□□ 1.13
PRKCSH-210ENST00000589990 MADDQ8WXG6 1647 aa22.11■■□□□ 1.13
PRKCSH-210ENST00000589990 BCORL1Q5H9F3 1711 aa22.1■■□□□ 1.13
PRKCSH-210ENST00000589990 LMTK3Q96Q04 1460 aa22.07■■□□□ 1.12
PRKCSH-210ENST00000589990 PCF11O94913 1555 aaKnown RBP22.07■■□□□ 1.12
PRKCSH-210ENST00000589990 NEO1Q92859 1461 aa22.03■■□□□ 1.12
PRKCSH-210ENST00000589990 PHLDB1Q86UU1 1377 aa22.02■■□□□ 1.12
PRKCSH-210ENST00000589990 ARID4BQ4LE39 1312 aaPredicted RBP22.02■■□□□ 1.12
PRKCSH-210ENST00000589990 RIMS1Q86UR5 1692 aaKnown RBP22.01■■□□□ 1.11
PRKCSH-210ENST00000589990 RAPGEF6Q8TEU7 1601 aa22■■□□□ 1.11
PRKCSH-210ENST00000589990 SAMD9Q5K651 1589 aa21.99■■□□□ 1.11
PRKCSH-210ENST00000589990 HSPA2P54652 639 aa21.98■■□□□ 1.11
PRKCSH-210ENST00000589990 SIGLEC1Q9BZZ2 1709 aa21.97■■□□□ 1.11
PRKCSH-210ENST00000589990 ARHGEF40Q8TER5 1519 aa21.96■■□□□ 1.11
PRKCSH-210ENST00000589990 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.96■■□□□ 1.11
PRKCSH-210ENST00000589990 HNRNPUL2Q1KMD3 747 aaKnown RBP21.96■■□□□ 1.11
PRKCSH-210ENST00000589990 NUP153P49790 1475 aaKnown RBP21.96■■□□□ 1.11
PRKCSH-210ENST00000589990 PLPPR3Q6T4P5 718 aa21.95■■□□□ 1.1
PRKCSH-210ENST00000589990 RICTORQ6R327 1708 aa21.94■■□□□ 1.1
PRKCSH-210ENST00000589990 DENND4BO75064 1496 aaPredicted RBP21.89■■□□□ 1.09
PRKCSH-210ENST00000589990 RANGAP1P46060 587 aaPredicted RBP21.88■■□□□ 1.09
PRKCSH-210ENST00000589990 FAM9AQ8IZU1 332 aaPredicted RBP21.88■■□□□ 1.09
PRKCSH-210ENST00000589990 FHOD3Q2V2M9 1422 aa21.87■■□□□ 1.09
PRKCSH-210ENST00000589990 AKNAQ7Z591 1439 aa21.87■■□□□ 1.09
PRKCSH-210ENST00000589990 YEATS2Q9ULM3 1422 aa21.87■■□□□ 1.09
PRKCSH-210ENST00000589990 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.85■■□□□ 1.09
PRKCSH-210ENST00000589990 FANCAO15360 1455 aa21.84■■□□□ 1.09
PRKCSH-210ENST00000589990 TTC37Q6PGP7 1564 aa21.84■■□□□ 1.09
PRKCSH-210ENST00000589990 ZMYM4Q5VZL5 1548 aa21.81■■□□□ 1.08
PRKCSH-210ENST00000589990 MLECQ14165 292 aa21.81■■□□□ 1.08
PRKCSH-210ENST00000589990 ZFYVE16Q7Z3T8 1539 aa21.8■■□□□ 1.08
PRKCSH-210ENST00000589990 CERKQ8TCT0 537 aa21.8■■□□□ 1.08
PRKCSH-210ENST00000589990 CSRNP3Q8WYN3 585 aa21.79■■□□□ 1.08
PRKCSH-210ENST00000589990 PLEKHD1A6NEE1 506 aa21.78■■□□□ 1.08
PRKCSH-210ENST00000589990 FER1L4A9Z1Z3 1794 aa21.78■■□□□ 1.08
PRKCSH-210ENST00000589990 CFAP74Q9C0B2 1584 aa21.78■■□□□ 1.08
PRKCSH-210ENST00000589990 HECW1Q76N89 1606 aa21.77■■□□□ 1.08
PRKCSH-210ENST00000589990 POGZQ7Z3K3 1410 aa21.76■■□□□ 1.07
PRKCSH-210ENST00000589990 EFCAB5A4FU69 1503 aa21.75■■□□□ 1.07
PRKCSH-210ENST00000589990 CDK13Q14004 1512 aaKnown RBP21.73■■□□□ 1.07
PRKCSH-210ENST00000589990 ILDR2Q71H61 639 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms