RNA–Protein interactions for RNA: ENST00000589923.1

GRN-216, Transcript of granulin precursor, humanhuman

TSL 2

Gene GRN, Length 437 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-216ENST00000589923 ADCY10Q96PN6 1610 aa19.65■□□□□ 0.74
GRN-216ENST00000589923 JPH4Q96JJ6 628 aa19.65■□□□□ 0.74
GRN-216ENST00000589923 DIP2BQ9P265 1576 aa19.65■□□□□ 0.74
GRN-216ENST00000589923 ABCC10Q5T3U5 1492 aa19.64■□□□□ 0.73
GRN-216ENST00000589923 MAPKBP1O60336 1514 aa19.64■□□□□ 0.73
GRN-216ENST00000589923 FAM69CQ0P6D2 419 aa19.55■□□□□ 0.72
GRN-216ENST00000589923 KIAA0586Q9BVV6 1533 aa19.51■□□□□ 0.71
GRN-216ENST00000589923 KDM6BO15054 1643 aa19.5■□□□□ 0.71
GRN-216ENST00000589923 TSPOAP1O95153 1857 aa19.49■□□□□ 0.71
GRN-216ENST00000589923 IGF1RP08069 1367 aa19.48■□□□□ 0.71
GRN-216ENST00000589923 CUL7Q14999 1698 aa19.48■□□□□ 0.71
GRN-216ENST00000589923 KDM4FA0A1W2PPD8 638 aa19.44■□□□□ 0.7
GRN-216ENST00000589923 NPM1P06748 294 aaKnown RBP eCLIP19.43■□□□□ 0.7
GRN-216ENST00000589923 PPRC1Q5VV67 1664 aaKnown RBP19.41■□□□□ 0.7
GRN-216ENST00000589923 KIF27Q86VH2 1401 aa19.4■□□□□ 0.7
GRN-216ENST00000589923 ABCC2Q92887 1545 aa19.35■□□□□ 0.69
GRN-216ENST00000589923 PTPRGP23470 1445 aa19.34■□□□□ 0.69
GRN-216ENST00000589923 GLI2P10070 1586 aa19.32■□□□□ 0.68
GRN-216ENST00000589923 IQGAP2Q13576 1575 aa19.32■□□□□ 0.68
GRN-216ENST00000589923 ASXL2Q76L83 1435 aa19.31■□□□□ 0.68
GRN-216ENST00000589923 CARMIL1Q5VZK9 1371 aa19.31■□□□□ 0.68
GRN-216ENST00000589923 TNIKQ9UKE5 1360 aa19.3■□□□□ 0.68
GRN-216ENST00000589923 DISP1Q96F81 1524 aa19.29■□□□□ 0.68
GRN-216ENST00000589923 UHRF1BP1LA0JNW5 1464 aa19.28■□□□□ 0.68
GRN-216ENST00000589923 TTBK1Q5TCY1 1321 aaPredicted RBP19.26■□□□□ 0.67
GRN-216ENST00000589923 PLB1Q6P1J6 1458 aa19.26■□□□□ 0.67
GRN-216ENST00000589923 COL17A1Q9UMD9 1497 aaPredicted RBP19.26■□□□□ 0.67
GRN-216ENST00000589923 CARMIL2Q6F5E8 1435 aa19.25■□□□□ 0.67
GRN-216ENST00000589923 MAP3K4Q9Y6R4 1608 aa19.25■□□□□ 0.67
GRN-216ENST00000589923 ADGRL1O94910 1474 aa19.22■□□□□ 0.67
GRN-216ENST00000589923 UACAQ9BZF9 1416 aa19.22■□□□□ 0.67
GRN-216ENST00000589923 EPRSP07814 1512 aaKnown RBP19.21■□□□□ 0.67
GRN-216ENST00000589923 KDM5BQ9UGL1 1544 aa19.21■□□□□ 0.67
GRN-216ENST00000589923 ZCCHC11Q5TAX3 1644 aaKnown RBP19.21■□□□□ 0.67
GRN-216ENST00000589923 UGGT2Q9NYU1 1516 aa19.19■□□□□ 0.66
GRN-216ENST00000589923 KIAA0556O60303 1618 aa19.18■□□□□ 0.66
GRN-216ENST00000589923 ILDR1Q86SU0 546 aaPredicted RBP19.13■□□□□ 0.65
GRN-216ENST00000589923 RAPGEF2Q9Y4G8 1499 aa19.11■□□□□ 0.65
GRN-216ENST00000589923 HECW2Q9P2P5 1572 aa19.09■□□□□ 0.65
GRN-216ENST00000589923 TEX14Q8IWB6 1497 aa19.09■□□□□ 0.65
GRN-216ENST00000589923 WDR7Q9Y4E6 1490 aa19.08■□□□□ 0.64
GRN-216ENST00000589923 CTTNBP2Q8WZ74 1663 aa19.05■□□□□ 0.64
GRN-216ENST00000589923 ABCA8O94911 1581 aa19.02■□□□□ 0.63
GRN-216ENST00000589923 CFAP43Q8NDM7 1665 aa19.01■□□□□ 0.63
GRN-216ENST00000589923 MAGI3Q5TCQ9 1506 aa18.99■□□□□ 0.63
GRN-216ENST00000589923 KIF21BO75037 1637 aa18.95■□□□□ 0.62
GRN-216ENST00000589923 CD109Q6YHK3 1445 aa18.94■□□□□ 0.62
GRN-216ENST00000589923 GOLGA3Q08378 1498 aa18.91■□□□□ 0.62
GRN-216ENST00000589923 PRXQ9BXM0 1461 aa18.89■□□□□ 0.61
GRN-216ENST00000589923 KCNH8Q96L42 1107 aa18.87■□□□□ 0.61
GRN-216ENST00000589923 ARAP3Q8WWN8 1544 aa18.85■□□□□ 0.61
GRN-216ENST00000589923 ABCA9Q8IUA7 1624 aa18.82■□□□□ 0.6
GRN-216ENST00000589923 ATP10BO94823 1461 aa18.82■□□□□ 0.6
GRN-216ENST00000589923 ADAMTSL3P82987 1691 aa18.81■□□□□ 0.6
GRN-216ENST00000589923 FRMPD1Q5SYB0 1578 aa18.79■□□□□ 0.6
GRN-216ENST00000589923 SAMD9Q5K651 1589 aa18.78■□□□□ 0.6
GRN-216ENST00000589923 ARID3CA6NKF2 412 aa18.77■□□□□ 0.6
GRN-216ENST00000589923 PTPRMP28827 1452 aa18.75■□□□□ 0.59
GRN-216ENST00000589923 RAPGEF6Q8TEU7 1601 aa18.73■□□□□ 0.59
GRN-216ENST00000589923 BCORL1Q5H9F3 1711 aa18.72■□□□□ 0.59
GRN-216ENST00000589923 P3H3Q8IVL6 736 aa18.72■□□□□ 0.59
GRN-216ENST00000589923 MADDQ8WXG6 1647 aa18.71■□□□□ 0.58
GRN-216ENST00000589923 RAPGEF3O95398 923 aa18.7■□□□□ 0.58
GRN-216ENST00000589923 NEO1Q92859 1461 aa18.7■□□□□ 0.58
GRN-216ENST00000589923 NUP153P49790 1475 aaKnown RBP18.68■□□□□ 0.58
GRN-216ENST00000589923 PHLDB1Q86UU1 1377 aa18.68■□□□□ 0.58
GRN-216ENST00000589923 ARHGEF40Q8TER5 1519 aa18.65■□□□□ 0.58
GRN-216ENST00000589923 PCF11O94913 1555 aaKnown RBP18.65■□□□□ 0.58
GRN-216ENST00000589923 RICTORQ6R327 1708 aa18.65■□□□□ 0.58
GRN-216ENST00000589923 LMTK3Q96Q04 1460 aa18.65■□□□□ 0.58
GRN-216ENST00000589923 SIGLEC1Q9BZZ2 1709 aa18.64■□□□□ 0.57
GRN-216ENST00000589923 FBXO41Q8TF61 875 aa18.63■□□□□ 0.57
GRN-216ENST00000589923 RIMS1Q86UR5 1692 aaKnown RBP18.61■□□□□ 0.57
GRN-216ENST00000589923 FHOD3Q2V2M9 1422 aa18.58■□□□□ 0.57
GRN-216ENST00000589923 TTC37Q6PGP7 1564 aa18.58■□□□□ 0.56
GRN-216ENST00000589923 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.57■□□□□ 0.561e-6■■■■□ 23.9
GRN-216ENST00000589923 ZMYM4Q5VZL5 1548 aa18.55■□□□□ 0.56
GRN-216ENST00000589923 DENND4BO75064 1496 aaPredicted RBP18.54■□□□□ 0.56
GRN-216ENST00000589923 CSRNP3Q8WYN3 585 aa18.54■□□□□ 0.56
GRN-216ENST00000589923 AKNAQ7Z591 1439 aa18.53■□□□□ 0.56
GRN-216ENST00000589923 FANCAO15360 1455 aa18.52■□□□□ 0.56
GRN-216ENST00000589923 CFAP74Q9C0B2 1584 aa18.52■□□□□ 0.56
GRN-216ENST00000589923 ARID4BQ4LE39 1312 aaPredicted RBP18.51■□□□□ 0.55
GRN-216ENST00000589923 YEATS2Q9ULM3 1422 aa18.51■□□□□ 0.55
GRN-216ENST00000589923 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.51■□□□□ 0.55
GRN-216ENST00000589923 HNRNPUL2Q1KMD3 747 aaKnown RBP18.51■□□□□ 0.55
GRN-216ENST00000589923 FAM9AQ8IZU1 332 aaPredicted RBP18.49■□□□□ 0.55
GRN-216ENST00000589923 ZFYVE16Q7Z3T8 1539 aa18.49■□□□□ 0.55
GRN-216ENST00000589923 HECW1Q76N89 1606 aa18.48■□□□□ 0.55
GRN-216ENST00000589923 CDK13Q14004 1512 aaKnown RBP18.48■□□□□ 0.55
GRN-216ENST00000589923 RANGAP1P46060 587 aaPredicted RBP18.47■□□□□ 0.55
GRN-216ENST00000589923 EFCAB5A4FU69 1503 aa18.46■□□□□ 0.55
GRN-216ENST00000589923 HSPA2P54652 639 aa18.46■□□□□ 0.55
GRN-216ENST00000589923 FER1L4A9Z1Z3 1794 aa18.45■□□□□ 0.54
GRN-216ENST00000589923 PLEKHD1A6NEE1 506 aa18.43■□□□□ 0.54
GRN-216ENST00000589923 EEA1Q15075 1411 aa18.42■□□□□ 0.54
GRN-216ENST00000589923 POGZQ7Z3K3 1410 aa18.42■□□□□ 0.54
GRN-216ENST00000589923 MAGI2Q86UL8 1455 aa18.42■□□□□ 0.54
GRN-216ENST00000589923 ARHGEF12Q9NZN5 1544 aa18.4■□□□□ 0.54
GRN-216ENST00000589923 PLPPR3Q6T4P5 718 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms