RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	JPH4	Q96JJ6	628 aa		29.43	■■■□□ 2.3
MBD1-221	ENST00000589867	KIAA0586	Q9BVV6	1533 aa		29.43	■■■□□ 2.3
MBD1-221	ENST00000589867	PRG4	Q92954	1404 aa	Predicted RBP	29.38	■■■□□ 2.29
MBD1-221	ENST00000589867	RAPGEF2	Q9Y4G8	1499 aa		29.36	■■■□□ 2.29
MBD1-221	ENST00000589867	PRX	Q9BXM0	1461 aa		29.31	■■■□□ 2.28
MBD1-221	ENST00000589867	CHIC1	Q5VXU3	224 aa		29.31	■■■□□ 2.28
MBD1-221	ENST00000589867	IQGAP2	Q13576	1575 aa		29.22	■■■□□ 2.27
MBD1-221	ENST00000589867	CSRNP3	Q8WYN3	585 aa		29.18	■■■□□ 2.26
MBD1-221	ENST00000589867	EEA1	Q15075	1411 aa		29.14	■■■□□ 2.26
MBD1-221	ENST00000589867	DISP1	Q96F81	1524 aa		29.11	■■■□□ 2.25
MBD1-221	ENST00000589867	UGGT2	Q9NYU1	1516 aa		29.11	■■■□□ 2.25
MBD1-221	ENST00000589867	CTTNBP2	Q8WZ74	1663 aa		29.1	■■■□□ 2.25
MBD1-221	ENST00000589867	FAM9A	Q8IZU1	332 aa	Predicted RBP	29.05	■■■□□ 2.24
MBD1-221	ENST00000589867	CARMIL2	Q6F5E8	1435 aa		29.02	■■■□□ 2.24
MBD1-221	ENST00000589867	ADCY10	Q96PN6	1610 aa		29.01	■■■□□ 2.23
MBD1-221	ENST00000589867	TNIK	Q9UKE5	1360 aa		29.01	■■■□□ 2.23
MBD1-221	ENST00000589867	PTPRG	P23470	1445 aa		28.99	■■■□□ 2.23
MBD1-221	ENST00000589867	KIAA0556	O60303	1618 aa		28.98	■■■□□ 2.23
MBD1-221	ENST00000589867	TRH	P20396	242 aa	Predicted RBP	28.93	■■■□□ 2.22
MBD1-221	ENST00000589867	KIF21B	O75037	1637 aa		28.92	■■■□□ 2.22
MBD1-221	ENST00000589867	TTBK1	Q5TCY1	1321 aa	Predicted RBP	28.89	■■■□□ 2.21
MBD1-221	ENST00000589867	GOLGA3	Q08378	1498 aa		28.83	■■■□□ 2.21
MBD1-221	ENST00000589867	UHRF1BP1L	A0JNW5	1464 aa		28.82	■■■□□ 2.2
MBD1-221	ENST00000589867	UACA	Q9BZF9	1416 aa		28.81	■■■□□ 2.2
MBD1-221	ENST00000589867	MAPKBP1	O60336	1514 aa		28.8	■■■□□ 2.2
MBD1-221	ENST00000589867	ABCC2	Q92887	1545 aa		28.78	■■■□□ 2.2
MBD1-221	ENST00000589867	SAMD9	Q5K651	1589 aa		28.77	■■■□□ 2.2
MBD1-221	ENST00000589867	KIF13A	Q9H1H9	1805 aa		28.76	■■■□□ 2.19
MBD1-221	ENST00000589867	PLB1	Q6P1J6	1458 aa		28.73	■■■□□ 2.19
MBD1-221	ENST00000589867	NPM1	P06748	294 aa	Known RBP eCLIP	28.73	■■■□□ 2.19
MBD1-221	ENST00000589867	ABCA8	O94911	1581 aa		28.71	■■■□□ 2.19
MBD1-221	ENST00000589867	P3H3	Q8IVL6	736 aa		28.7	■■■□□ 2.18
MBD1-221	ENST00000589867	ABCC10	Q5T3U5	1492 aa		28.7	■■■□□ 2.18
MBD1-221	ENST00000589867	KDM5B	Q9UGL1	1544 aa		28.69	■■■□□ 2.18
MBD1-221	ENST00000589867	EHMT2	Q96KQ7	1210 aa		28.67	■■■□□ 2.18
MBD1-221	ENST00000589867	DIP2B	Q9P265	1576 aa		28.66	■■■□□ 2.18
MBD1-221	ENST00000589867	ZCCHC11	Q5TAX3	1644 aa	Known RBP	28.62	■■■□□ 2.17
MBD1-221	ENST00000589867	ASXL2	Q76L83	1435 aa		28.61	■■■□□ 2.17
MBD1-221	ENST00000589867	RANGAP1	P46060	587 aa	Predicted RBP	28.6	■■■□□ 2.17
MBD1-221	ENST00000589867	FAM69C	Q0P6D2	419 aa		28.59	■■■□□ 2.17
MBD1-221	ENST00000589867	UBTF	P17480	764 aa	Known RBP	28.58	■■■□□ 2.17
MBD1-221	ENST00000589867	FHOD3	Q2V2M9	1422 aa		28.58	■■■□□ 2.17
MBD1-221	ENST00000589867	EFCAB5	A4FU69	1503 aa		28.54	■■■□□ 2.16
MBD1-221	ENST00000589867	RAPGEF6	Q8TEU7	1601 aa		28.47	■■■□□ 2.15
MBD1-221	ENST00000589867	ARHGAP35	Q9NRY4	1499 aa		28.47	■■■□□ 2.15
MBD1-221	ENST00000589867	GLI2	P10070	1586 aa		28.47	■■■□□ 2.15
MBD1-221	ENST00000589867	ATP10B	O94823	1461 aa		28.46	■■■□□ 2.15
MBD1-221	ENST00000589867	EPRS	P07814	1512 aa	Known RBP	28.46	■■■□□ 2.15
MBD1-221	ENST00000589867	WDR7	Q9Y4E6	1490 aa		28.43	■■■□□ 2.14
MBD1-221	ENST00000589867	NUP153	P49790	1475 aa	Known RBP	28.42	■■■□□ 2.14
MBD1-221	ENST00000589867	TSPOAP1	O95153	1857 aa		28.4	■■■□□ 2.14
MBD1-221	ENST00000589867	ARID3C	A6NKF2	412 aa		28.4	■■■□□ 2.14
MBD1-221	ENST00000589867	PPRC1	Q5VV67	1664 aa	Known RBP	28.39	■■■□□ 2.14
MBD1-221	ENST00000589867	MAP3K4	Q9Y6R4	1608 aa		28.35	■■■□□ 2.13
MBD1-221	ENST00000589867	KCNH8	Q96L42	1107 aa		28.26	■■■□□ 2.11
MBD1-221	ENST00000589867	FMN1	Q68DA7	1419 aa		28.25	■■■□□ 2.11
MBD1-221	ENST00000589867	CDK13	Q14004	1512 aa	Known RBP	28.21	■■■□□ 2.11
MBD1-221	ENST00000589867	CFAP43	Q8NDM7	1665 aa		28.2	■■■□□ 2.11
MBD1-221	ENST00000589867	CLIP1	P30622	1438 aa		28.19	■■■□□ 2.1
MBD1-221	ENST00000589867	KDM6B	O15054	1643 aa		28.17	■■■□□ 2.1
MBD1-221	ENST00000589867	CD109	Q6YHK3	1445 aa		28.17	■■■□□ 2.1
MBD1-221	ENST00000589867	COL17A1	Q9UMD9	1497 aa	Predicted RBP	28.16	■■■□□ 2.1
MBD1-221	ENST00000589867	LRRIQ1	Q96JM4	1722 aa		28.16	■■■□□ 2.1
MBD1-221	ENST00000589867	MAGI3	Q5TCQ9	1506 aa		28.16	■■■□□ 2.1
MBD1-221	ENST00000589867	HECW1	Q76N89	1606 aa		28.15	■■■□□ 2.1
MBD1-221	ENST00000589867	ABCA9	Q8IUA7	1624 aa		28.15	■■■□□ 2.1
MBD1-221	ENST00000589867	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	28.15	■■■□□ 2.1
MBD1-221	ENST00000589867	HNRNPUL2	Q1KMD3	747 aa	Known RBP	28.15	■■■□□ 2.1
MBD1-221	ENST00000589867	LOC105371045	A0A1W2PR82	267 aa		28.13	■■■□□ 2.09
MBD1-221	ENST00000589867	TEX14	Q8IWB6	1497 aa		28.11	■■■□□ 2.09
MBD1-221	ENST00000589867	PCF11	O94913	1555 aa	Known RBP	28.11	■■■□□ 2.09
MBD1-221	ENST00000589867	PLEKHD1	A6NEE1	506 aa		28.09	■■■□□ 2.09
MBD1-221	ENST00000589867	CASKIN1	Q8WXD9	1431 aa		28.09	■■■□□ 2.09
MBD1-221	ENST00000589867	CEP162	Q5TB80	1403 aa		28.05	■■■□□ 2.08
MBD1-221	ENST00000589867	ATP1B4	Q9UN42	357 aa	Predicted RBP	28.05	■■■□□ 2.08
MBD1-221	ENST00000589867	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	28.02	■■■□□ 2.08
MBD1-221	ENST00000589867	TTC37	Q6PGP7	1564 aa		27.99	■■■□□ 2.07
MBD1-221	ENST00000589867	FYCO1	Q9BQS8	1478 aa		27.99	■■■□□ 2.07
MBD1-221	ENST00000589867	TRO	Q12816	1431 aa	Predicted RBP	27.93	■■■□□ 2.06
MBD1-221	ENST00000589867	KIF14	Q15058	1648 aa		27.93	■■■□□ 2.06
MBD1-221	ENST00000589867	CCDC18	Q5T9S5	1454 aa		27.92	■■■□□ 2.06
MBD1-221	ENST00000589867	ARAP3	Q8WWN8	1544 aa		27.92	■■■□□ 2.06
MBD1-221	ENST00000589867	NEO1	Q92859	1461 aa		27.89	■■■□□ 2.06
MBD1-221	ENST00000589867	CDK11A	Q9UQ88	783 aa	Predicted RBP	27.88	■■■□□ 2.05
MBD1-221	ENST00000589867	PHLDB1	Q86UU1	1377 aa		27.85	■■■□□ 2.05
MBD1-221	ENST00000589867	PLCH2	O75038	1416 aa		27.83	■■■□□ 2.05
MBD1-221	ENST00000589867	FANCA	O15360	1455 aa		27.81	■■■□□ 2.04
MBD1-221	ENST00000589867	FRMPD1	Q5SYB0	1578 aa		27.8	■■■□□ 2.04
MBD1-221	ENST00000589867	AKNA	Q7Z591	1439 aa		27.78	■■■□□ 2.04
MBD1-221	ENST00000589867	MYO5C	Q9NQX4	1742 aa		27.78	■■■□□ 2.04
MBD1-221	ENST00000589867	RAPGEF3	O95398	923 aa		27.77	■■■□□ 2.04
MBD1-221	ENST00000589867	CFAP74	Q9C0B2	1584 aa		27.75	■■■□□ 2.03
MBD1-221	ENST00000589867	RICTOR	Q6R327	1708 aa		27.72	■■■□□ 2.03
MBD1-221	ENST00000589867	VPS8	Q8N3P4	1428 aa		27.72	■■■□□ 2.03
MBD1-221	ENST00000589867	CDC42BPB	Q9Y5S2	1711 aa		27.72	■■■□□ 2.03
MBD1-221	ENST00000589867	KDM4F	A0A1W2PPD8	638 aa		27.69	■■■□□ 2.02
MBD1-221	ENST00000589867	DENND4B	O75064	1496 aa	Predicted RBP	27.69	■■■□□ 2.02
MBD1-221	ENST00000589867	CDC42BPA	Q5VT25	1732 aa		27.67	■■■□□ 2.02
MBD1-221	ENST00000589867	PREX2	Q70Z35	1606 aa		27.67	■■■□□ 2.02
MBD1-221	ENST00000589867	ADGRL1	O94910	1474 aa		27.65	■■■□□ 2.02

Retrieved 100 of 20,778 RNA–protein pairs in 21 ms