RNA–Protein interactions for RNA: ENST00000589781.1

APOC1-205, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 273 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-205ENST00000589781 CARMIL1Q5VZK9 1371 aa16.68■□□□□ 0.26
APOC1-205ENST00000589781 LOC105371045A0A1W2PR82 267 aa16.67■□□□□ 0.26
APOC1-205ENST00000589781 EEA1Q15075 1411 aa16.67■□□□□ 0.26
APOC1-205ENST00000589781 JPH4Q96JJ6 628 aa16.66■□□□□ 0.26
APOC1-205ENST00000589781 CUL7Q14999 1698 aa16.65■□□□□ 0.26
APOC1-205ENST00000589781 PRG4Q92954 1404 aaPredicted RBP16.64■□□□□ 0.25
APOC1-205ENST00000589781 KIAA0586Q9BVV6 1533 aa16.62■□□□□ 0.25
APOC1-205ENST00000589781 EHMT2Q96KQ7 1210 aa16.59■□□□□ 0.25
APOC1-205ENST00000589781 KIF21BO75037 1637 aa16.56■□□□□ 0.24
APOC1-205ENST00000589781 RAPGEF2Q9Y4G8 1499 aa16.54■□□□□ 0.24
APOC1-205ENST00000589781 PRXQ9BXM0 1461 aa16.53■□□□□ 0.24
APOC1-205ENST00000589781 CSRNP3Q8WYN3 585 aa16.51■□□□□ 0.23
APOC1-205ENST00000589781 GOLGA3Q08378 1498 aa16.49■□□□□ 0.23
APOC1-205ENST00000589781 DISP1Q96F81 1524 aa16.46■□□□□ 0.23
APOC1-205ENST00000589781 TRHP20396 242 aaPredicted RBP16.46■□□□□ 0.23
APOC1-205ENST00000589781 IQGAP2Q13576 1575 aa16.46■□□□□ 0.23
APOC1-205ENST00000589781 UGGT2Q9NYU1 1516 aa16.42■□□□□ 0.22
APOC1-205ENST00000589781 ADCY10Q96PN6 1610 aa16.41■□□□□ 0.22
APOC1-205ENST00000589781 PTPRGP23470 1445 aa16.39■□□□□ 0.21
APOC1-205ENST00000589781 TNIKQ9UKE5 1360 aa16.38■□□□□ 0.21
APOC1-205ENST00000589781 TTBK1Q5TCY1 1321 aaPredicted RBP16.37■□□□□ 0.21
APOC1-205ENST00000589781 CARMIL2Q6F5E8 1435 aa16.36■□□□□ 0.21
APOC1-205ENST00000589781 KIAA0556O60303 1618 aa16.34■□□□□ 0.21
APOC1-205ENST00000589781 CEP162Q5TB80 1403 aa16.34■□□□□ 0.21
APOC1-205ENST00000589781 CTTNBP2Q8WZ74 1663 aa16.33■□□□□ 0.2
APOC1-205ENST00000589781 UBTFP17480 764 aaKnown RBP16.32■□□□□ 0.2
APOC1-205ENST00000589781 MAPKBP1O60336 1514 aa16.29■□□□□ 0.2
APOC1-205ENST00000589781 UHRF1BP1LA0JNW5 1464 aa16.29■□□□□ 0.2
APOC1-205ENST00000589781 UACAQ9BZF9 1416 aa16.28■□□□□ 0.2
APOC1-205ENST00000589781 ABCC2Q92887 1545 aa16.28■□□□□ 0.2
APOC1-205ENST00000589781 KIF13AQ9H1H9 1805 aa16.27■□□□□ 0.2
APOC1-205ENST00000589781 ABCC10Q5T3U5 1492 aa16.27■□□□□ 0.19
APOC1-205ENST00000589781 PLB1Q6P1J6 1458 aa16.25■□□□□ 0.19
APOC1-205ENST00000589781 KDM5BQ9UGL1 1544 aa16.24■□□□□ 0.19
APOC1-205ENST00000589781 DIP2BQ9P265 1576 aa16.23■□□□□ 0.19
APOC1-205ENST00000589781 NPM1P06748 294 aaKnown RBP eCLIP16.23■□□□□ 0.19
APOC1-205ENST00000589781 P3H3Q8IVL6 736 aa16.23■□□□□ 0.19
APOC1-205ENST00000589781 FAM69CQ0P6D2 419 aa16.22■□□□□ 0.19
APOC1-205ENST00000589781 ABCA8O94911 1581 aa16.21■□□□□ 0.19
APOC1-205ENST00000589781 SAMD9Q5K651 1589 aa16.21■□□□□ 0.18
APOC1-205ENST00000589781 CLIP1P30622 1438 aa16.2■□□□□ 0.18
APOC1-205ENST00000589781 ASXL2Q76L83 1435 aa16.2■□□□□ 0.18
APOC1-205ENST00000589781 ZCCHC11Q5TAX3 1644 aaKnown RBP16.16■□□□□ 0.18
APOC1-205ENST00000589781 RANGAP1P46060 587 aaPredicted RBP16.14■□□□□ 0.17
APOC1-205ENST00000589781 FHOD3Q2V2M9 1422 aa16.12■□□□□ 0.17
APOC1-205ENST00000589781 EPRSP07814 1512 aaKnown RBP16.11■□□□□ 0.17
APOC1-205ENST00000589781 ATP10BO94823 1461 aa16.1■□□□□ 0.17
APOC1-205ENST00000589781 GLI2P10070 1586 aa16.1■□□□□ 0.17
APOC1-205ENST00000589781 ARID3CA6NKF2 412 aa16.09■□□□□ 0.17
APOC1-205ENST00000589781 PPRC1Q5VV67 1664 aaKnown RBP16.08■□□□□ 0.17
APOC1-205ENST00000589781 ARHGAP35Q9NRY4 1499 aa16.07■□□□□ 0.16
APOC1-205ENST00000589781 NUP153P49790 1475 aaKnown RBP16.06■□□□□ 0.16
APOC1-205ENST00000589781 WDR7Q9Y4E6 1490 aa16.06■□□□□ 0.16
APOC1-205ENST00000589781 VPS8Q8N3P4 1428 aa16.05■□□□□ 0.16
APOC1-205ENST00000589781 RAPGEF6Q8TEU7 1601 aa16.04■□□□□ 0.16
APOC1-205ENST00000589781 COL17A1Q9UMD9 1497 aaPredicted RBP16.03■□□□□ 0.16
APOC1-205ENST00000589781 MAP3K4Q9Y6R4 1608 aa16.03■□□□□ 0.16
APOC1-205ENST00000589781 TSPOAP1O95153 1857 aa16.03■□□□□ 0.16
APOC1-205ENST00000589781 EFCAB5A4FU69 1503 aa16.02■□□□□ 0.15
APOC1-205ENST00000589781 KCNH8Q96L42 1107 aa16■□□□□ 0.15
APOC1-205ENST00000589781 KDM6BO15054 1643 aa15.95■□□□□ 0.14
APOC1-205ENST00000589781 PPARGC1BQ86YN6 1023 aaKnown RBP15.95■□□□□ 0.14
APOC1-205ENST00000589781 PCF11O94913 1555 aaKnown RBP15.94■□□□□ 0.14
APOC1-205ENST00000589781 CD109Q6YHK3 1445 aa15.94■□□□□ 0.14
APOC1-205ENST00000589781 MAGI3Q5TCQ9 1506 aa15.93■□□□□ 0.14
APOC1-205ENST00000589781 CDK13Q14004 1512 aaKnown RBP15.92■□□□□ 0.14
APOC1-205ENST00000589781 CFAP43Q8NDM7 1665 aa15.89■□□□□ 0.13
APOC1-205ENST00000589781 ABCA9Q8IUA7 1624 aa15.89■□□□□ 0.13
APOC1-205ENST00000589781 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.88■□□□□ 0.13
APOC1-205ENST00000589781 HNRNPUL2Q1KMD3 747 aaKnown RBP15.88■□□□□ 0.13
APOC1-205ENST00000589781 FMN1Q68DA7 1419 aa15.87■□□□□ 0.13
APOC1-205ENST00000589781 TEX14Q8IWB6 1497 aa15.87■□□□□ 0.13
APOC1-205ENST00000589781 PCGF6Q9BYE7 350 aa15.86■□□□□ 0.13
APOC1-205ENST00000589781 LRRIQ1Q96JM4 1722 aa15.85■□□□□ 0.13
APOC1-205ENST00000589781 PLEKHD1A6NEE1 506 aa15.83■□□□□ 0.12
APOC1-205ENST00000589781 TRIM26Q12899 539 aaPredicted RBP15.83■□□□□ 0.12
APOC1-205ENST00000589781 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.83■□□□□ 0.12
APOC1-205ENST00000589781 FYCO1Q9BQS8 1478 aa15.82■□□□□ 0.12
APOC1-205ENST00000589781 TIAM1Q13009 1591 aa15.82■□□□□ 0.12
APOC1-205ENST00000589781 KDM4FA0A1W2PPD8 638 aa15.81■□□□□ 0.12
APOC1-205ENST00000589781 HECW1Q76N89 1606 aa15.81■□□□□ 0.12
APOC1-205ENST00000589781 CASKIN1Q8WXD9 1431 aa15.81■□□□□ 0.12
APOC1-205ENST00000589781 TTC37Q6PGP7 1564 aa15.8■□□□□ 0.12
APOC1-205ENST00000589781 ARAP3Q8WWN8 1544 aa15.8■□□□□ 0.12
APOC1-205ENST00000589781 ATP1B4Q9UN42 357 aaPredicted RBP15.8■□□□□ 0.12
APOC1-205ENST00000589781 APLP2Q06481 763 aa15.78■□□□□ 0.12
APOC1-205ENST00000589781 KIF14Q15058 1648 aa15.76■□□□□ 0.11
APOC1-205ENST00000589781 MAP3K1Q13233 1512 aa15.75■□□□□ 0.11
APOC1-205ENST00000589781 RAPGEF3O95398 923 aa15.75■□□□□ 0.11
APOC1-205ENST00000589781 NEO1Q92859 1461 aa15.75■□□□□ 0.11
APOC1-205ENST00000589781 TROQ12816 1431 aaPredicted RBP15.75■□□□□ 0.11
APOC1-205ENST00000589781 FRMPD1Q5SYB0 1578 aa15.75■□□□□ 0.11
APOC1-205ENST00000589781 PLCH2O75038 1416 aa15.72■□□□□ 0.11
APOC1-205ENST00000589781 AKNAQ7Z591 1439 aa15.71■□□□□ 0.11
APOC1-205ENST00000589781 KANK4Q5T7N3 995 aaPredicted RBP15.71■□□□□ 0.11
APOC1-205ENST00000589781 PHLDB1Q86UU1 1377 aa15.71■□□□□ 0.11
APOC1-205ENST00000589781 FANCAO15360 1455 aa15.71■□□□□ 0.1
APOC1-205ENST00000589781 LRRC9Q6ZRR7 1453 aa15.69■□□□□ 0.1
APOC1-205ENST00000589781 CCDC18Q5T9S5 1454 aa15.68■□□□□ 0.1
APOC1-205ENST00000589781 ADGRL1O94910 1474 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms