RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 FAM69CQ0P6D2 419 aa27.11■■□□□ 1.93
SF3A2-204ENST00000589118 RUSC2Q8N2Y8 1516 aa27.07■■□□□ 1.92
SF3A2-204ENST00000589118 ABCC10Q5T3U5 1492 aa27.02■■□□□ 1.92
SF3A2-204ENST00000589118 NPM1P06748 294 aaKnown RBP eCLIP27.01■■□□□ 1.91
SF3A2-204ENST00000589118 ADCY10Q96PN6 1610 aa27.01■■□□□ 1.91
SF3A2-204ENST00000589118 DIP2BQ9P265 1576 aa26.97■■□□□ 1.91
SF3A2-204ENST00000589118 TSPOAP1O95153 1857 aa26.97■■□□□ 1.91
SF3A2-204ENST00000589118 MAPKBP1O60336 1514 aa26.93■■□□□ 1.9
SF3A2-204ENST00000589118 TTBK1Q5TCY1 1321 aaPredicted RBP26.91■■□□□ 1.9
SF3A2-204ENST00000589118 KDM4FA0A1W2PPD8 638 aa26.89■■□□□ 1.9
SF3A2-204ENST00000589118 KDM6BO15054 1643 aa26.87■■□□□ 1.89
SF3A2-204ENST00000589118 IGF1RP08069 1367 aa26.85■■□□□ 1.89
SF3A2-204ENST00000589118 KIAA0586Q9BVV6 1533 aa26.85■■□□□ 1.89
SF3A2-204ENST00000589118 CUL7Q14999 1698 aa26.74■■□□□ 1.87
SF3A2-204ENST00000589118 PTPRGP23470 1445 aa26.73■■□□□ 1.87
SF3A2-204ENST00000589118 KIF27Q86VH2 1401 aa26.73■■□□□ 1.87
SF3A2-204ENST00000589118 PPRC1Q5VV67 1664 aaKnown RBP26.64■■□□□ 1.86
SF3A2-204ENST00000589118 CARMIL1Q5VZK9 1371 aa26.64■■□□□ 1.86
SF3A2-204ENST00000589118 ASXL2Q76L83 1435 aa26.62■■□□□ 1.85
SF3A2-204ENST00000589118 TNIKQ9UKE5 1360 aa26.61■■□□□ 1.85
SF3A2-204ENST00000589118 ABCC2Q92887 1545 aa26.6■■□□□ 1.85
SF3A2-204ENST00000589118 CARMIL2Q6F5E8 1435 aa26.56■■□□□ 1.84
SF3A2-204ENST00000589118 IQGAP2Q13576 1575 aa26.55■■□□□ 1.84
SF3A2-204ENST00000589118 ILDR1Q86SU0 546 aaPredicted RBP26.54■■□□□ 1.84
SF3A2-204ENST00000589118 COL17A1Q9UMD9 1497 aaPredicted RBP26.54■■□□□ 1.84
SF3A2-204ENST00000589118 GLI2P10070 1586 aa26.52■■□□□ 1.84
SF3A2-204ENST00000589118 PLB1Q6P1J6 1458 aa26.52■■□□□ 1.84
SF3A2-204ENST00000589118 DISP1Q96F81 1524 aa26.51■■□□□ 1.83
SF3A2-204ENST00000589118 ADGRL1O94910 1474 aa26.49■■□□□ 1.83
SF3A2-204ENST00000589118 UACAQ9BZF9 1416 aa26.49■■□□□ 1.83
SF3A2-204ENST00000589118 UHRF1BP1LA0JNW5 1464 aa26.47■■□□□ 1.83
SF3A2-204ENST00000589118 EPRSP07814 1512 aaKnown RBP26.44■■□□□ 1.82
SF3A2-204ENST00000589118 ZCCHC11Q5TAX3 1644 aaKnown RBP26.43■■□□□ 1.82
SF3A2-204ENST00000589118 MAP3K4Q9Y6R4 1608 aa26.43■■□□□ 1.82
SF3A2-204ENST00000589118 KDM5BQ9UGL1 1544 aa26.39■■□□□ 1.82
SF3A2-204ENST00000589118 KIAA0556O60303 1618 aa26.34■■□□□ 1.81
SF3A2-204ENST00000589118 UGGT2Q9NYU1 1516 aa26.34■■□□□ 1.81
SF3A2-204ENST00000589118 RAPGEF2Q9Y4G8 1499 aa26.32■■□□□ 1.8
SF3A2-204ENST00000589118 HECW2Q9P2P5 1572 aa26.29■■□□□ 1.8
SF3A2-204ENST00000589118 TEX14Q8IWB6 1497 aa26.28■■□□□ 1.8
SF3A2-204ENST00000589118 KCNH8Q96L42 1107 aa26.26■■□□□ 1.79
SF3A2-204ENST00000589118 WDR7Q9Y4E6 1490 aa26.23■■□□□ 1.79
SF3A2-204ENST00000589118 CTTNBP2Q8WZ74 1663 aa26.19■■□□□ 1.78
SF3A2-204ENST00000589118 CD109Q6YHK3 1445 aa26.16■■□□□ 1.78
SF3A2-204ENST00000589118 ARID3CA6NKF2 412 aa26.15■■□□□ 1.78
SF3A2-204ENST00000589118 CFAP43Q8NDM7 1665 aa26.12■■□□□ 1.77
SF3A2-204ENST00000589118 ABCA8O94911 1581 aa26.12■■□□□ 1.77
SF3A2-204ENST00000589118 KIF21BO75037 1637 aa26.1■■□□□ 1.77
SF3A2-204ENST00000589118 MAGI3Q5TCQ9 1506 aa26.09■■□□□ 1.77
SF3A2-204ENST00000589118 P3H3Q8IVL6 736 aa26.07■■□□□ 1.76
SF3A2-204ENST00000589118 GOLGA3Q08378 1498 aa26.04■■□□□ 1.76
SF3A2-204ENST00000589118 ATP10BO94823 1461 aa25.94■■□□□ 1.74
SF3A2-204ENST00000589118 PRXQ9BXM0 1461 aa25.93■■□□□ 1.74
SF3A2-204ENST00000589118 RAPGEF3O95398 923 aa25.91■■□□□ 1.74
SF3A2-204ENST00000589118 ARAP3Q8WWN8 1544 aa25.91■■□□□ 1.74
SF3A2-204ENST00000589118 ABCA9Q8IUA7 1624 aa25.85■■□□□ 1.73
SF3A2-204ENST00000589118 ADAMTSL3P82987 1691 aa25.84■■□□□ 1.73
SF3A2-204ENST00000589118 PTPRMP28827 1452 aa25.84■■□□□ 1.73
SF3A2-204ENST00000589118 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.82■■□□□ 1.72
SF3A2-204ENST00000589118 RANGAP1P46060 587 aaPredicted RBP25.82■■□□□ 1.72
SF3A2-204ENST00000589118 HNRNPUL2Q1KMD3 747 aaKnown RBP25.82■■□□□ 1.72
SF3A2-204ENST00000589118 FBXO41Q8TF61 875 aa25.77■■□□□ 1.72
SF3A2-204ENST00000589118 FRMPD1Q5SYB0 1578 aa25.77■■□□□ 1.72
SF3A2-204ENST00000589118 RAPGEF6Q8TEU7 1601 aa25.77■■□□□ 1.72
SF3A2-204ENST00000589118 ARID4BQ4LE39 1312 aaPredicted RBP25.76■■□□□ 1.71
SF3A2-204ENST00000589118 BCORL1Q5H9F3 1711 aa25.75■■□□□ 1.71
SF3A2-204ENST00000589118 MADDQ8WXG6 1647 aa25.75■■□□□ 1.71
SF3A2-204ENST00000589118 SAMD9Q5K651 1589 aa25.75■■□□□ 1.71
SF3A2-204ENST00000589118 FAM9AQ8IZU1 332 aaPredicted RBP25.75■■□□□ 1.71
SF3A2-204ENST00000589118 PLPPR3Q6T4P5 718 aa25.71■■□□□ 1.71
SF3A2-204ENST00000589118 NEO1Q92859 1461 aa25.7■■□□□ 1.7
SF3A2-204ENST00000589118 PHLDB1Q86UU1 1377 aa25.69■■□□□ 1.7
SF3A2-204ENST00000589118 NUP153P49790 1475 aaKnown RBP25.68■■□□□ 1.7
SF3A2-204ENST00000589118 CSRNP3Q8WYN3 585 aa25.68■■□□□ 1.7
SF3A2-204ENST00000589118 RIMS1Q86UR5 1692 aaKnown RBP25.68■■□□□ 1.7
SF3A2-204ENST00000589118 FHOD3Q2V2M9 1422 aa25.65■■□□□ 1.7
SF3A2-204ENST00000589118 LMTK3Q96Q04 1460 aa25.64■■□□□ 1.69
SF3A2-204ENST00000589118 PCF11O94913 1555 aaKnown RBP25.64■■□□□ 1.69
SF3A2-204ENST00000589118 HSPA2P54652 639 aa25.63■■□□□ 1.69
SF3A2-204ENST00000589118 RICTORQ6R327 1708 aa25.62■■□□□ 1.69
SF3A2-204ENST00000589118 SIGLEC1Q9BZZ2 1709 aa25.62■■□□□ 1.69
SF3A2-204ENST00000589118 ARHGEF40Q8TER5 1519 aa25.58■■□□□ 1.68
SF3A2-204ENST00000589118 AKNAQ7Z591 1439 aa25.57■■□□□ 1.68
SF3A2-204ENST00000589118 PLEKHD1A6NEE1 506 aa25.57■■□□□ 1.68
SF3A2-204ENST00000589118 DENND4BO75064 1496 aaPredicted RBP25.57■■□□□ 1.68
SF3A2-204ENST00000589118 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.55■■□□□ 1.68
SF3A2-204ENST00000589118 MLECQ14165 292 aa25.54■■□□□ 1.68
SF3A2-204ENST00000589118 YEATS2Q9ULM3 1422 aa25.54■■□□□ 1.68
SF3A2-204ENST00000589118 FANCAO15360 1455 aa25.53■■□□□ 1.68
SF3A2-204ENST00000589118 TTC37Q6PGP7 1564 aa25.53■■□□□ 1.68
SF3A2-204ENST00000589118 CDK13Q14004 1512 aaKnown RBP25.47■■□□□ 1.67
SF3A2-204ENST00000589118 EHMT2Q96KQ7 1210 aa25.46■■□□□ 1.67
SF3A2-204ENST00000589118 ZFYVE16Q7Z3T8 1539 aa25.45■■□□□ 1.66
SF3A2-204ENST00000589118 HECW1Q76N89 1606 aa25.45■■□□□ 1.66
SF3A2-204ENST00000589118 CFAP74Q9C0B2 1584 aa25.44■■□□□ 1.66
SF3A2-204ENST00000589118 ZMYM4Q5VZL5 1548 aa25.42■■□□□ 1.66
SF3A2-204ENST00000589118 FER1L4A9Z1Z3 1794 aa25.41■■□□□ 1.66
SF3A2-204ENST00000589118 POGZQ7Z3K3 1410 aa25.39■■□□□ 1.66
SF3A2-204ENST00000589118 SCAPERQ9BY12 1400 aa25.39■■□□□ 1.66
SF3A2-204ENST00000589118 EFCAB5A4FU69 1503 aa25.38■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms