RNA–Protein interactions for RNA: ENST00000588750.5

APOC1-202, Transcript of apolipoprotein C1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOC1, Length 689 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-202ENST00000588750 RIMBP3CA6NJZ7 1639 aa13.49□□□□□ -0.25
APOC1-202ENST00000588750 RIMBP3BA6NNM3 1639 aa13.49□□□□□ -0.25
APOC1-202ENST00000588750 RIMBP3Q9UFD9 1639 aa13.49□□□□□ -0.25
APOC1-202ENST00000588750 JPH4Q96JJ6 628 aa13.48□□□□□ -0.25
APOC1-202ENST00000588750 SHROOM2Q13796 1616 aa13.47□□□□□ -0.25
APOC1-202ENST00000588750 FAM9AQ8IZU1 332 aaPredicted RBP13.47□□□□□ -0.25
APOC1-202ENST00000588750 IQGAP2Q13576 1575 aa13.45□□□□□ -0.26
APOC1-202ENST00000588750 KIF21BO75037 1637 aa13.45□□□□□ -0.26
APOC1-202ENST00000588750 CTTNBP2Q8WZ74 1663 aa13.44□□□□□ -0.26
APOC1-202ENST00000588750 CARMIL2Q6F5E8 1435 aa13.44□□□□□ -0.26
APOC1-202ENST00000588750 PRG4Q92954 1404 aaPredicted RBP13.42□□□□□ -0.26
APOC1-202ENST00000588750 CYB5RLQ6IPT4 315 aa13.39□□□□□ -0.27
APOC1-202ENST00000588750 GOLGA3Q08378 1498 aa13.39□□□□□ -0.27
APOC1-202ENST00000588750 UGGT2Q9NYU1 1516 aa13.38□□□□□ -0.27
APOC1-202ENST00000588750 ARAP1Q96P48 1450 aa13.37□□□□□ -0.27
APOC1-202ENST00000588750 UBTFP17480 764 aaKnown RBP13.36□□□□□ -0.27
APOC1-202ENST00000588750 TNIKQ9UKE5 1360 aa13.33□□□□□ -0.27
APOC1-202ENST00000588750 ERCC6L2Q5T890 1561 aa13.32□□□□□ -0.28
APOC1-202ENST00000588750 KIAA0556O60303 1618 aa13.31□□□□□ -0.28
APOC1-202ENST00000588750 PTPRGP23470 1445 aa13.3□□□□□ -0.28
APOC1-202ENST00000588750 NPM1P06748 294 aaKnown RBP eCLIP13.29□□□□□ -0.28
APOC1-202ENST00000588750 DISP1Q96F81 1524 aa13.29□□□□□ -0.28
APOC1-202ENST00000588750 EFCAB5A4FU69 1503 aa13.27□□□□□ -0.29
APOC1-202ENST00000588750 SAMD9Q5K651 1589 aa13.24□□□□□ -0.29
APOC1-202ENST00000588750 EHMT2Q96KQ7 1210 aa13.24□□□□□ -0.29
APOC1-202ENST00000588750 TTBK1Q5TCY1 1321 aaPredicted RBP13.23□□□□□ -0.29
APOC1-202ENST00000588750 UACAQ9BZF9 1416 aa13.22□□□□□ -0.29
APOC1-202ENST00000588750 RANGAP1P46060 587 aaPredicted RBP13.21□□□□□ -0.29
APOC1-202ENST00000588750 UHRF1BP1LA0JNW5 1464 aa13.21□□□□□ -0.3
APOC1-202ENST00000588750 ABCC2Q92887 1545 aa13.18□□□□□ -0.3
APOC1-202ENST00000588750 P3H3Q8IVL6 736 aa13.18□□□□□ -0.3
APOC1-202ENST00000588750 ADCY10Q96PN6 1610 aa13.17□□□□□ -0.3
APOC1-202ENST00000588750 FMN1Q68DA7 1419 aa13.17□□□□□ -0.3
APOC1-202ENST00000588750 FHOD3Q2V2M9 1422 aa13.14□□□□□ -0.31
APOC1-202ENST00000588750 MAPKBP1O60336 1514 aa13.14□□□□□ -0.31
APOC1-202ENST00000588750 ABCA8O94911 1581 aa13.14□□□□□ -0.31
APOC1-202ENST00000588750 CLIP1P30622 1438 aa13.13□□□□□ -0.31
APOC1-202ENST00000588750 PLB1Q6P1J6 1458 aa13.13□□□□□ -0.31
APOC1-202ENST00000588750 ARHGAP35Q9NRY4 1499 aa13.13□□□□□ -0.31
APOC1-202ENST00000588750 TRHP20396 242 aaPredicted RBP13.13□□□□□ -0.31
APOC1-202ENST00000588750 RAPGEF6Q8TEU7 1601 aa13.13□□□□□ -0.31
APOC1-202ENST00000588750 KDM5BQ9UGL1 1544 aa13.13□□□□□ -0.31
APOC1-202ENST00000588750 ZCCHC11Q5TAX3 1644 aaKnown RBP13.08□□□□□ -0.32
APOC1-202ENST00000588750 CEP162Q5TB80 1403 aa13.07□□□□□ -0.32
APOC1-202ENST00000588750 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.07□□□□□ -0.32
APOC1-202ENST00000588750 HNRNPUL2Q1KMD3 747 aaKnown RBP13.07□□□□□ -0.32
APOC1-202ENST00000588750 HECW1Q76N89 1606 aa13.06□□□□□ -0.32
APOC1-202ENST00000588750 LOC105371045A0A1W2PR82 267 aa13.06□□□□□ -0.32
APOC1-202ENST00000588750 ASXL2Q76L83 1435 aa13.05□□□□□ -0.32
APOC1-202ENST00000588750 CDK11AQ9UQ88 783 aaPredicted RBP13.05□□□□□ -0.32
APOC1-202ENST00000588750 ABCC10Q5T3U5 1492 aa13.04□□□□□ -0.32
APOC1-202ENST00000588750 ATP1B4Q9UN42 357 aaPredicted RBP13.04□□□□□ -0.32
APOC1-202ENST00000588750 FAM69CQ0P6D2 419 aa13.03□□□□□ -0.32
APOC1-202ENST00000588750 ATP10BO94823 1461 aa13.03□□□□□ -0.32
APOC1-202ENST00000588750 NUP153P49790 1475 aaKnown RBP13.03□□□□□ -0.32
APOC1-202ENST00000588750 WDR7Q9Y4E6 1490 aa13.03□□□□□ -0.32
APOC1-202ENST00000588750 PLEKHD1A6NEE1 506 aa13.02□□□□□ -0.33
APOC1-202ENST00000588750 CASKIN1Q8WXD9 1431 aa13.02□□□□□ -0.33
APOC1-202ENST00000588750 CCDC18Q5T9S5 1454 aa13.02□□□□□ -0.33
APOC1-202ENST00000588750 FYCO1Q9BQS8 1478 aa13.01□□□□□ -0.33
APOC1-202ENST00000588750 GLI2P10070 1586 aa13□□□□□ -0.33
APOC1-202ENST00000588750 DIP2BQ9P265 1576 aa13□□□□□ -0.33
APOC1-202ENST00000588750 EPRSP07814 1512 aaKnown RBP12.98□□□□□ -0.33
APOC1-202ENST00000588750 KIF13AQ9H1H9 1805 aa12.98□□□□□ -0.33
APOC1-202ENST00000588750 ARID3CA6NKF2 412 aa12.98□□□□□ -0.33
APOC1-202ENST00000588750 PCF11O94913 1555 aaKnown RBP12.97□□□□□ -0.33
APOC1-202ENST00000588750 KCNH8Q96L42 1107 aa12.95□□□□□ -0.34
APOC1-202ENST00000588750 TEX14Q8IWB6 1497 aa12.94□□□□□ -0.34
APOC1-202ENST00000588750 VPS8Q8N3P4 1428 aa12.94□□□□□ -0.34
APOC1-202ENST00000588750 CFAP43Q8NDM7 1665 aa12.93□□□□□ -0.34
APOC1-202ENST00000588750 CDK13Q14004 1512 aaKnown RBP12.92□□□□□ -0.34
APOC1-202ENST00000588750 MAP3K4Q9Y6R4 1608 aa12.91□□□□□ -0.34
APOC1-202ENST00000588750 APLP2Q06481 763 aa12.91□□□□□ -0.34
APOC1-202ENST00000588750 CD109Q6YHK3 1445 aa12.9□□□□□ -0.34
APOC1-202ENST00000588750 TROQ12816 1431 aaPredicted RBP12.89□□□□□ -0.35
APOC1-202ENST00000588750 KIF14Q15058 1648 aa12.89□□□□□ -0.35
APOC1-202ENST00000588750 ABCA9Q8IUA7 1624 aa12.89□□□□□ -0.35
APOC1-202ENST00000588750 TSPOAP1O95153 1857 aa12.88□□□□□ -0.35
APOC1-202ENST00000588750 LRRIQ1Q96JM4 1722 aa12.88□□□□□ -0.35
APOC1-202ENST00000588750 MAGI3Q5TCQ9 1506 aa12.88□□□□□ -0.35
APOC1-202ENST00000588750 MTUS2Q5JR59 1369 aa12.87□□□□□ -0.35
APOC1-202ENST00000588750 PHLDB1Q86UU1 1377 aa12.87□□□□□ -0.35
APOC1-202ENST00000588750 MAP3K1Q13233 1512 aa12.86□□□□□ -0.35
APOC1-202ENST00000588750 CFAP74Q9C0B2 1584 aa12.85□□□□□ -0.35
APOC1-202ENST00000588750 EHBP1L1Q8N3D4 1523 aa12.83□□□□□ -0.35
APOC1-202ENST00000588750 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.83□□□□□ -0.35
APOC1-202ENST00000588750 KDM6BO15054 1643 aa12.82□□□□□ -0.36
APOC1-202ENST00000588750 NEO1Q92859 1461 aa12.82□□□□□ -0.36
APOC1-202ENST00000588750 ARAP3Q8WWN8 1544 aa12.82□□□□□ -0.36
APOC1-202ENST00000588750 TIAM1Q13009 1591 aa12.81□□□□□ -0.36
APOC1-202ENST00000588750 PPRC1Q5VV67 1664 aaKnown RBP12.81□□□□□ -0.36
APOC1-202ENST00000588750 MYO5CQ9NQX4 1742 aa12.81□□□□□ -0.36
APOC1-202ENST00000588750 PLCH2O75038 1416 aa12.8□□□□□ -0.36
APOC1-202ENST00000588750 TTC37Q6PGP7 1564 aa12.79□□□□□ -0.36
APOC1-202ENST00000588750 EFCAB2Q5VUJ9 269 aa12.79□□□□□ -0.36
APOC1-202ENST00000588750 FANCAO15360 1455 aa12.78□□□□□ -0.36
APOC1-202ENST00000588750 SUPT6HQ7KZ85 1726 aaKnown RBP12.78□□□□□ -0.36
APOC1-202ENST00000588750 CCNB3Q8WWL7 1395 aa12.78□□□□□ -0.36
APOC1-202ENST00000588750 LRRC9Q6ZRR7 1453 aa12.77□□□□□ -0.37
APOC1-202ENST00000588750 ARHGAP5Q13017 1502 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms