RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 CSRNP3Q8WYN3 585 aa33.54■■■□□ 2.96
ATG4D-208ENST00000588667 SHROOM2Q13796 1616 aa33.51■■■□□ 2.96
ATG4D-208ENST00000588667 KIAA0586Q9BVV6 1533 aa33.49■■■□□ 2.95
ATG4D-208ENST00000588667 FAM9AQ8IZU1 332 aaPredicted RBP33.44■■■□□ 2.94
ATG4D-208ENST00000588667 IQGAP2Q13576 1575 aa33.37■■■□□ 2.93
ATG4D-208ENST00000588667 JPH4Q96JJ6 628 aa33.36■■■□□ 2.93
ATG4D-208ENST00000588667 CTTNBP2Q8WZ74 1663 aa33.36■■■□□ 2.93
ATG4D-208ENST00000588667 ARAP1Q96P48 1450 aa33.34■■■□□ 2.93
ATG4D-208ENST00000588667 KIF21BO75037 1637 aa33.34■■■□□ 2.93
ATG4D-208ENST00000588667 ERCC6L2Q5T890 1561 aa33.33■■■□□ 2.93
ATG4D-208ENST00000588667 PRG4Q92954 1404 aaPredicted RBP33.31■■■□□ 2.92
ATG4D-208ENST00000588667 CYB5RLQ6IPT4 315 aa33.2■■■□□ 2.91
ATG4D-208ENST00000588667 UGGT2Q9NYU1 1516 aa33.19■■■□□ 2.9
ATG4D-208ENST00000588667 CARMIL2Q6F5E8 1435 aa33.13■■■□□ 2.89
ATG4D-208ENST00000588667 GOLGA3Q08378 1498 aa33.12■■■□□ 2.89
ATG4D-208ENST00000588667 DISP1Q96F81 1524 aa33.09■■■□□ 2.89
ATG4D-208ENST00000588667 KIAA0556O60303 1618 aa33.05■■■□□ 2.88
ATG4D-208ENST00000588667 TNIKQ9UKE5 1360 aa32.99■■■□□ 2.87
ATG4D-208ENST00000588667 EHMT2Q96KQ7 1210 aa32.96■■■□□ 2.87
ATG4D-208ENST00000588667 UBTFP17480 764 aaKnown RBP32.95■■■□□ 2.87
ATG4D-208ENST00000588667 PTPRGP23470 1445 aa32.94■■■□□ 2.86
ATG4D-208ENST00000588667 SAMD9Q5K651 1589 aa32.91■■■□□ 2.86
ATG4D-208ENST00000588667 TTBK1Q5TCY1 1321 aaPredicted RBP32.82■■■□□ 2.84
ATG4D-208ENST00000588667 EFCAB5A4FU69 1503 aa32.82■■■□□ 2.84
ATG4D-208ENST00000588667 ADCY10Q96PN6 1610 aa32.82■■■□□ 2.84
ATG4D-208ENST00000588667 RANGAP1P46060 587 aaPredicted RBP32.77■■■□□ 2.84
ATG4D-208ENST00000588667 UACAQ9BZF9 1416 aa32.74■■■□□ 2.83
ATG4D-208ENST00000588667 P3H3Q8IVL6 736 aa32.73■■■□□ 2.83
ATG4D-208ENST00000588667 UHRF1BP1LA0JNW5 1464 aa32.72■■■□□ 2.83
ATG4D-208ENST00000588667 ABCC2Q92887 1545 aa32.71■■■□□ 2.83
ATG4D-208ENST00000588667 FHOD3Q2V2M9 1422 aa32.67■■■□□ 2.82
ATG4D-208ENST00000588667 PLB1Q6P1J6 1458 aa32.66■■■□□ 2.82
ATG4D-208ENST00000588667 ABCA8O94911 1581 aa32.66■■■□□ 2.82
ATG4D-208ENST00000588667 ARHGAP35Q9NRY4 1499 aa32.64■■■□□ 2.82
ATG4D-208ENST00000588667 NPM1P06748 294 aaKnown RBP eCLIP32.62■■■□□ 2.81
ATG4D-208ENST00000588667 MAPKBP1O60336 1514 aa32.58■■■□□ 2.81
ATG4D-208ENST00000588667 KDM5BQ9UGL1 1544 aa32.56■■■□□ 2.8
ATG4D-208ENST00000588667 RAPGEF6Q8TEU7 1601 aa32.55■■■□□ 2.8
ATG4D-208ENST00000588667 CLIP1P30622 1438 aa32.52■■■□□ 2.8
ATG4D-208ENST00000588667 ZCCHC11Q5TAX3 1644 aaKnown RBP32.52■■■□□ 2.8
ATG4D-208ENST00000588667 LOC105371045A0A1W2PR82 267 aa32.51■■■□□ 2.79
ATG4D-208ENST00000588667 FMN1Q68DA7 1419 aa32.48■■■□□ 2.79
ATG4D-208ENST00000588667 TRHP20396 242 aaPredicted RBP32.44■■■□□ 2.78
ATG4D-208ENST00000588667 CEP162Q5TB80 1403 aa32.43■■■□□ 2.78
ATG4D-208ENST00000588667 NUP153P49790 1475 aaKnown RBP32.41■■■□□ 2.78
ATG4D-208ENST00000588667 ASXL2Q76L83 1435 aa32.41■■■□□ 2.78
ATG4D-208ENST00000588667 KIF13AQ9H1H9 1805 aa32.38■■■□□ 2.77
ATG4D-208ENST00000588667 ABCC10Q5T3U5 1492 aa32.37■■■□□ 2.77
ATG4D-208ENST00000588667 ATP10BO94823 1461 aa32.36■■■□□ 2.77
ATG4D-208ENST00000588667 DIP2BQ9P265 1576 aa32.36■■■□□ 2.77
ATG4D-208ENST00000588667 HECW1Q76N89 1606 aa32.33■■■□□ 2.77
ATG4D-208ENST00000588667 WDR7Q9Y4E6 1490 aa32.3■■■□□ 2.76
ATG4D-208ENST00000588667 ARID3CA6NKF2 412 aa32.29■■■□□ 2.76
ATG4D-208ENST00000588667 PCF11O94913 1555 aaKnown RBP32.27■■■□□ 2.76
ATG4D-208ENST00000588667 CASKIN1Q8WXD9 1431 aa32.24■■■□□ 2.75
ATG4D-208ENST00000588667 FAM69CQ0P6D2 419 aa32.24■■■□□ 2.75
ATG4D-208ENST00000588667 EPRSP07814 1512 aaKnown RBP32.22■■■□□ 2.75
ATG4D-208ENST00000588667 GLI2P10070 1586 aa32.22■■■□□ 2.75
ATG4D-208ENST00000588667 FYCO1Q9BQS8 1478 aa32.21■■■□□ 2.75
ATG4D-208ENST00000588667 CDK13Q14004 1512 aaKnown RBP32.2■■■□□ 2.74
ATG4D-208ENST00000588667 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.19■■■□□ 2.74
ATG4D-208ENST00000588667 HNRNPUL2Q1KMD3 747 aaKnown RBP32.19■■■□□ 2.74
ATG4D-208ENST00000588667 ATP1B4Q9UN42 357 aaPredicted RBP32.18■■■□□ 2.74
ATG4D-208ENST00000588667 LRRIQ1Q96JM4 1722 aa32.17■■■□□ 2.74
ATG4D-208ENST00000588667 CCDC18Q5T9S5 1454 aa32.11■■■□□ 2.73
ATG4D-208ENST00000588667 MAP3K4Q9Y6R4 1608 aa32.09■■■□□ 2.73
ATG4D-208ENST00000588667 TSPOAP1O95153 1857 aa32.08■■■□□ 2.73
ATG4D-208ENST00000588667 PLEKHD1A6NEE1 506 aa32.08■■■□□ 2.73
ATG4D-208ENST00000588667 KCNH8Q96L42 1107 aa32.07■■■□□ 2.72
ATG4D-208ENST00000588667 CFAP43Q8NDM7 1665 aa32.05■■■□□ 2.72
ATG4D-208ENST00000588667 VPS8Q8N3P4 1428 aa32.04■■■□□ 2.72
ATG4D-208ENST00000588667 CDK11AQ9UQ88 783 aaPredicted RBP32.02■■■□□ 2.72
ATG4D-208ENST00000588667 ABCA9Q8IUA7 1624 aa32.01■■■□□ 2.72
ATG4D-208ENST00000588667 PPRC1Q5VV67 1664 aaKnown RBP32■■■□□ 2.71
ATG4D-208ENST00000588667 TROQ12816 1431 aaPredicted RBP31.95■■■□□ 2.71
ATG4D-208ENST00000588667 CD109Q6YHK3 1445 aa31.94■■■□□ 2.7
ATG4D-208ENST00000588667 MAGI3Q5TCQ9 1506 aa31.91■■■□□ 2.7
ATG4D-208ENST00000588667 TEX14Q8IWB6 1497 aa31.9■■■□□ 2.7
ATG4D-208ENST00000588667 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.9■■■□□ 2.7
ATG4D-208ENST00000588667 KIF14Q15058 1648 aa31.9■■■□□ 2.7
ATG4D-208ENST00000588667 TTC37Q6PGP7 1564 aa31.87■■■□□ 2.69
ATG4D-208ENST00000588667 TIAM1Q13009 1591 aa31.81■■■□□ 2.68
ATG4D-208ENST00000588667 KDM6BO15054 1643 aa31.77■■■□□ 2.68
ATG4D-208ENST00000588667 MTUS2Q5JR59 1369 aa31.76■■■□□ 2.68
ATG4D-208ENST00000588667 EHBP1L1Q8N3D4 1523 aa31.76■■■□□ 2.68
ATG4D-208ENST00000588667 MYO5CQ9NQX4 1742 aa31.76■■■□□ 2.68
ATG4D-208ENST00000588667 MAP3K1Q13233 1512 aa31.76■■■□□ 2.67
ATG4D-208ENST00000588667 CFAP74Q9C0B2 1584 aa31.7■■■□□ 2.67
ATG4D-208ENST00000588667 NEO1Q92859 1461 aa31.7■■■□□ 2.67
ATG4D-208ENST00000588667 ARAP3Q8WWN8 1544 aa31.7■■■□□ 2.66
ATG4D-208ENST00000588667 PLCH2O75038 1416 aa31.7■■■□□ 2.66
ATG4D-208ENST00000588667 PHLDB1Q86UU1 1377 aa31.68■■■□□ 2.66
ATG4D-208ENST00000588667 FANCAO15360 1455 aa31.67■■■□□ 2.66
ATG4D-208ENST00000588667 LRRC9Q6ZRR7 1453 aa31.65■■■□□ 2.66
ATG4D-208ENST00000588667 PREX2Q70Z35 1606 aa31.64■■■□□ 2.66
ATG4D-208ENST00000588667 CDC42BPAQ5VT25 1732 aa31.64■■■□□ 2.65
ATG4D-208ENST00000588667 COL17A1Q9UMD9 1497 aaPredicted RBP31.63■■■□□ 2.65
ATG4D-208ENST00000588667 SUPT6HQ7KZ85 1726 aaKnown RBP31.62■■■□□ 2.65
ATG4D-208ENST00000588667 CDC42BPBQ9Y5S2 1711 aa31.62■■■□□ 2.65
ATG4D-208ENST00000588667 APLP2Q06481 763 aa31.61■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms