RNA–Protein interactions for RNA: ENST00000588652.5

ERCC2-211, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC2, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-211ENST00000588652 FHAD1B1AJZ9 1412 aa26.31■■□□□ 1.8
ERCC2-211ENST00000588652 RRBP1Q9P2E9 1410 aaKnown RBP26.31■■□□□ 1.8
ERCC2-211ENST00000588652 EFCAB5A4FU69 1503 aa26.29■■□□□ 1.8
ERCC2-211ENST00000588652 P3H3Q8IVL6 736 aa26.25■■□□□ 1.79
ERCC2-211ENST00000588652 MRC2Q9UBG0 1479 aa26.24■■□□□ 1.79
ERCC2-211ENST00000588652 PCF11O94913 1555 aaKnown RBP26.24■■□□□ 1.79
ERCC2-211ENST00000588652 FHOD3Q2V2M9 1422 aa26.23■■□□□ 1.79
ERCC2-211ENST00000588652 DIEXFQ68CQ4 756 aaKnown RBP26.2■■□□□ 1.78
ERCC2-211ENST00000588652 LRRC9Q6ZRR7 1453 aa26.19■■□□□ 1.78
ERCC2-211ENST00000588652 CFAP43Q8NDM7 1665 aa26.19■■□□□ 1.78
ERCC2-211ENST00000588652 CCNB3Q8WWL7 1395 aa26.18■■□□□ 1.78
ERCC2-211ENST00000588652 SCAF1Q9H7N4 1312 aaKnown RBP26.18■■□□□ 1.78
ERCC2-211ENST00000588652 FYCO1Q9BQS8 1478 aa26.15■■□□□ 1.78
ERCC2-211ENST00000588652 PBRM1Q86U86 1689 aa26.15■■□□□ 1.78
ERCC2-211ENST00000588652 AQRO60306 1485 aaKnown RBP eCLIP26.14■■□□□ 1.784e-7■■■■■ 34.6
ERCC2-211ENST00000588652 CASKIN1Q8WXD9 1431 aa26.12■■□□□ 1.77
ERCC2-211ENST00000588652 SAMD9Q5K651 1589 aa26.11■■□□□ 1.77
ERCC2-211ENST00000588652 FMN1Q68DA7 1419 aa26.09■■□□□ 1.77
ERCC2-211ENST00000588652 WDR62O43379 1518 aa26.07■■□□□ 1.76
ERCC2-211ENST00000588652 ATP1B4Q9UN42 357 aaPredicted RBP26.06■■□□□ 1.76
ERCC2-211ENST00000588652 ZNF316A6NFI3 1004 aaPredicted RBP26.05■■□□□ 1.76
ERCC2-211ENST00000588652 SNAPC4Q5SXM2 1469 aa26.04■■□□□ 1.76
ERCC2-211ENST00000588652 PHLDB1Q86UU1 1377 aa26.03■■□□□ 1.76
ERCC2-211ENST00000588652 ADAMTS12P58397 1594 aa26.03■■□□□ 1.76
ERCC2-211ENST00000588652 IFT140Q96RY7 1462 aa26.02■■□□□ 1.76
ERCC2-211ENST00000588652 DHX57Q6P158 1386 aaKnown RBP26.01■■□□□ 1.75
ERCC2-211ENST00000588652 GRIN2BQ13224 1484 aa26.01■■□□□ 1.75
ERCC2-211ENST00000588652 CLSPNQ9HAW4 1339 aa25.98■■□□□ 1.75
ERCC2-211ENST00000588652 ACIN1Q9UKV3 1341 aaKnown RBP25.97■■□□□ 1.75
ERCC2-211ENST00000588652 ZNF608Q9ULD9 1512 aaPredicted RBP25.97■■□□□ 1.75
ERCC2-211ENST00000588652 ITGAEP38570 1179 aa25.95■■□□□ 1.75
ERCC2-211ENST00000588652 LRRIQ1Q96JM4 1722 aa25.92■■□□□ 1.74
ERCC2-211ENST00000588652 IQGAP2Q13576 1575 aa25.92■■□□□ 1.74
ERCC2-211ENST00000588652 NEUROD1Q13562 356 aa25.92■■□□□ 1.74
ERCC2-211ENST00000588652 ERCC6Q03468 1493 aa25.91■■□□□ 1.74
ERCC2-211ENST00000588652 THOC2Q8NI27 1593 aaKnown RBP25.89■■□□□ 1.73
ERCC2-211ENST00000588652 FAM50AQ14320 339 aaKnown RBP25.85■■□□□ 1.73
ERCC2-211ENST00000588652 EIF4G3O43432 1585 aaKnown RBP25.84■■□□□ 1.73
ERCC2-211ENST00000588652 MTUS2Q5JR59 1369 aa25.83■■□□□ 1.73
ERCC2-211ENST00000588652 RAB3GAP2Q9H2M9 1393 aa25.83■■□□□ 1.73
ERCC2-211ENST00000588652 CENPBP07199 599 aaPredicted RBP25.83■■□□□ 1.72
ERCC2-211ENST00000588652 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.81■■□□□ 1.72
ERCC2-211ENST00000588652 SETD5Q9C0A6 1442 aa25.79■■□□□ 1.72
ERCC2-211ENST00000588652 UGGT2Q9NYU1 1516 aa25.77■■□□□ 1.72
ERCC2-211ENST00000588652 FGD6Q6ZV73 1430 aa25.76■■□□□ 1.71
ERCC2-211ENST00000588652 EHBP1L1Q8N3D4 1523 aa25.74■■□□□ 1.71
ERCC2-211ENST00000588652 CCDC18Q5T9S5 1454 aa25.74■■□□□ 1.71
ERCC2-211ENST00000588652 KIAA0586Q9BVV6 1533 aa25.73■■□□□ 1.71
ERCC2-211ENST00000588652 HECW1Q76N89 1606 aa25.73■■□□□ 1.71
ERCC2-211ENST00000588652 GRIN2AQ12879 1464 aa25.73■■□□□ 1.71
ERCC2-211ENST00000588652 SUPT6HQ7KZ85 1726 aaKnown RBP25.72■■□□□ 1.71
ERCC2-211ENST00000588652 NCOA2Q15596 1464 aa25.72■■□□□ 1.71
ERCC2-211ENST00000588652 MAGI3Q5TCQ9 1506 aa25.68■■□□□ 1.7
ERCC2-211ENST00000588652 MAGI1Q96QZ7 1491 aaPredicted RBP25.68■■□□□ 1.7
ERCC2-211ENST00000588652 MAPKBP1O60336 1514 aa25.67■■□□□ 1.7
ERCC2-211ENST00000588652 MYOM3Q5VTT5 1437 aa25.67■■□□□ 1.7
ERCC2-211ENST00000588652 EPRSP07814 1512 aaKnown RBP25.65■■□□□ 1.7
ERCC2-211ENST00000588652 KIAA0556O60303 1618 aa25.65■■□□□ 1.7
ERCC2-211ENST00000588652 ARHGEF11O15085 1522 aa25.65■■□□□ 1.7
ERCC2-211ENST00000588652 MIER1Q8N108 512 aa25.64■■□□□ 1.7
ERCC2-211ENST00000588652 DISP1Q96F81 1524 aa25.64■■□□□ 1.7
ERCC2-211ENST00000588652 GTF3C3Q9Y5Q9 886 aa25.63■■□□□ 1.69
ERCC2-211ENST00000588652 SYNJ2O15056 1496 aa25.61■■□□□ 1.69
ERCC2-211ENST00000588652 CDK13Q14004 1512 aaKnown RBP25.59■■□□□ 1.69
ERCC2-211ENST00000588652 PELP1Q8IZL8 1130 aaKnown RBP25.58■■□□□ 1.69
ERCC2-211ENST00000588652 CHMP7Q8WUX9 453 aaPredicted RBP25.57■■□□□ 1.68
ERCC2-211ENST00000588652 CEP170Q5SW79 1584 aa25.56■■□□□ 1.68
ERCC2-211ENST00000588652 PTPRKQ15262 1439 aa25.56■■□□□ 1.68
ERCC2-211ENST00000588652 PTPN23Q9H3S7 1636 aa25.56■■□□□ 1.68
ERCC2-211ENST00000588652 HFM1A2PYH4 1435 aa25.51■■□□□ 1.67
ERCC2-211ENST00000588652 YTHDC1Q96MU7 727 aaKnown RBP25.51■■□□□ 1.67
ERCC2-211ENST00000588652 RAPGEF6Q8TEU7 1601 aa25.49■■□□□ 1.67
ERCC2-211ENST00000588652 TCOF1Q13428 1488 aaKnown RBP25.48■■□□□ 1.67
ERCC2-211ENST00000588652 NUP160Q12769 1436 aa25.48■■□□□ 1.67
ERCC2-211ENST00000588652 ARID3CA6NKF2 412 aa25.47■■□□□ 1.67
ERCC2-211ENST00000588652 NUP153P49790 1475 aaKnown RBP25.47■■□□□ 1.67
ERCC2-211ENST00000588652 FBLN2P98095 1184 aa25.47■■□□□ 1.67
ERCC2-211ENST00000588652 NAIPQ13075 1403 aa25.44■■□□□ 1.66
ERCC2-211ENST00000588652 MIA2Q96PC5 1412 aa25.43■■□□□ 1.66
ERCC2-211ENST00000588652 SIN3AQ96ST3 1273 aa25.4■■□□□ 1.66
ERCC2-211ENST00000588652 UACAQ9BZF9 1416 aa25.38■■□□□ 1.65
ERCC2-211ENST00000588652 JPH4Q96JJ6 628 aa25.38■■□□□ 1.65
ERCC2-211ENST00000588652 CARMIL2Q6F5E8 1435 aa25.37■■□□□ 1.65
ERCC2-211ENST00000588652 PLB1Q6P1J6 1458 aa25.35■■□□□ 1.65
ERCC2-211ENST00000588652 TIMELESSQ9UNS1 1208 aa25.33■■□□□ 1.65
ERCC2-211ENST00000588652 CDK11AQ9UQ88 783 aaPredicted RBP25.33■■□□□ 1.65
ERCC2-211ENST00000588652 GCC2Q8IWJ2 1684 aa25.32■■□□□ 1.64
ERCC2-211ENST00000588652 AKNAQ7Z591 1439 aa25.3■■□□□ 1.64
ERCC2-211ENST00000588652 CHIC2Q9UKJ5 165 aa25.28■■□□□ 1.64
ERCC2-211ENST00000588652 RRP7BPQ9NSQ0 103 aa25.27■■□□□ 1.64
ERCC2-211ENST00000588652 TROQ12816 1431 aaPredicted RBP25.27■■□□□ 1.64
ERCC2-211ENST00000588652 PRG4Q92954 1404 aaPredicted RBP25.25■■□□□ 1.63
ERCC2-211ENST00000588652 DNMT1P26358 1616 aaKnown RBP25.21■■□□□ 1.63
ERCC2-211ENST00000588652 ABCA8O94911 1581 aa25.21■■□□□ 1.63
ERCC2-211ENST00000588652 DAPK1P53355 1430 aa25.21■■□□□ 1.63
ERCC2-211ENST00000588652 ADCY10Q96PN6 1610 aa25.21■■□□□ 1.63
ERCC2-211ENST00000588652 KDM6BO15054 1643 aa25.2■■□□□ 1.62
ERCC2-211ENST00000588652 PPP1R15AO75807 674 aaPredicted RBP25.18■■□□□ 1.62
ERCC2-211ENST00000588652 KIF14Q15058 1648 aa25.17■■□□□ 1.62
ERCC2-211ENST00000588652 ZNF644Q9H582 1327 aaPredicted RBP25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms