RNA–Protein interactions for RNA: ENST00000588216.5

TNPO2-210, Transcript of transportin 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNPO2, Length 3,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO2-210ENST00000588216 HNRNPUL2Q1KMD3 747 aaKnown RBP18.31■□□□□ 0.52
TNPO2-210ENST00000588216 TARBP1Q13395 1621 aaKnown RBP18.29■□□□□ 0.52
TNPO2-210ENST00000588216 WDR97A6NE52 1622 aa18.28■□□□□ 0.52
TNPO2-210ENST00000588216 ZNF608Q9ULD9 1512 aaPredicted RBP18.28■□□□□ 0.52
TNPO2-210ENST00000588216 NEUROD1Q13562 356 aa18.28■□□□□ 0.52
TNPO2-210ENST00000588216 ABCA5Q8WWZ7 1642 aa18.26■□□□□ 0.51
TNPO2-210ENST00000588216 FHOD3Q2V2M9 1422 aa18.23■□□□□ 0.51
TNPO2-210ENST00000588216 CCER1Q8TC90 406 aaPredicted RBP18.23■□□□□ 0.51
TNPO2-210ENST00000588216 CUL7Q14999 1698 aa18.22■□□□□ 0.51
TNPO2-210ENST00000588216 FBLN2P98095 1184 aa18.2■□□□□ 0.5
TNPO2-210ENST00000588216 WDR62O43379 1518 aa18.2■□□□□ 0.5
TNPO2-210ENST00000588216 GTF3C3Q9Y5Q9 886 aa18.2■□□□□ 0.5
TNPO2-210ENST00000588216 IFT140Q96RY7 1462 aa18.18■□□□□ 0.5
TNPO2-210ENST00000588216 CENPBP07199 599 aaPredicted RBP18.17■□□□□ 0.5
TNPO2-210ENST00000588216 GRIN2BQ13224 1484 aa18.14■□□□□ 0.49
TNPO2-210ENST00000588216 ITGAEP38570 1179 aa18.13■□□□□ 0.49
TNPO2-210ENST00000588216 FHAD1B1AJZ9 1412 aa18.12■□□□□ 0.49
TNPO2-210ENST00000588216 PBRM1Q86U86 1689 aa18.11■□□□□ 0.49
TNPO2-210ENST00000588216 THOC2Q8NI27 1593 aaKnown RBP18.1■□□□□ 0.49
TNPO2-210ENST00000588216 ARID3CA6NKF2 412 aa18.09■□□□□ 0.49
TNPO2-210ENST00000588216 CHMP7Q8WUX9 453 aaPredicted RBP18.09■□□□□ 0.49
TNPO2-210ENST00000588216 CTTNBP2Q8WZ74 1663 aa18.08■□□□□ 0.49
TNPO2-210ENST00000588216 SNAPC4Q5SXM2 1469 aa18.08■□□□□ 0.49
TNPO2-210ENST00000588216 EIF4G3O43432 1585 aaKnown RBP18.05■□□□□ 0.48
TNPO2-210ENST00000588216 ADAMTS12P58397 1594 aa18.04■□□□□ 0.48
TNPO2-210ENST00000588216 PCF11O94913 1555 aaKnown RBP18.04■□□□□ 0.48
TNPO2-210ENST00000588216 EFCAB5A4FU69 1503 aa18.01■□□□□ 0.47
TNPO2-210ENST00000588216 TIAM1Q13009 1591 aa17.99■□□□□ 0.47
TNPO2-210ENST00000588216 FMN1Q68DA7 1419 aa17.98■□□□□ 0.47
TNPO2-210ENST00000588216 FAM50AQ14320 339 aaKnown RBP17.97■□□□□ 0.47
TNPO2-210ENST00000588216 LRRC9Q6ZRR7 1453 aa17.97■□□□□ 0.47
TNPO2-210ENST00000588216 CASKIN1Q8WXD9 1431 aa17.96■□□□□ 0.47
TNPO2-210ENST00000588216 DIEXFQ68CQ4 756 aaKnown RBP17.96■□□□□ 0.47
TNPO2-210ENST00000588216 IQGAP2Q13576 1575 aa17.95■□□□□ 0.46
TNPO2-210ENST00000588216 PHLDB1Q86UU1 1377 aa17.95■□□□□ 0.46
TNPO2-210ENST00000588216 CCNB3Q8WWL7 1395 aa17.95■□□□□ 0.46
TNPO2-210ENST00000588216 GRIN2AQ12879 1464 aa17.95■□□□□ 0.46
TNPO2-210ENST00000588216 FYCO1Q9BQS8 1478 aa17.92■□□□□ 0.46
TNPO2-210ENST00000588216 SAMD9Q5K651 1589 aa17.92■□□□□ 0.46
TNPO2-210ENST00000588216 MTUS2Q5JR59 1369 aa17.91■□□□□ 0.46
TNPO2-210ENST00000588216 RRBP1Q9P2E9 1410 aaKnown RBP17.9■□□□□ 0.46
TNPO2-210ENST00000588216 MAGI1Q96QZ7 1491 aaPredicted RBP17.88■□□□□ 0.45
TNPO2-210ENST00000588216 SYNJ2O15056 1496 aa17.88■□□□□ 0.45
TNPO2-210ENST00000588216 KIAA0586Q9BVV6 1533 aa17.88■□□□□ 0.45
TNPO2-210ENST00000588216 MAP3K1Q13233 1512 aa17.87■□□□□ 0.45
TNPO2-210ENST00000588216 JPH4Q96JJ6 628 aa17.87■□□□□ 0.45
TNPO2-210ENST00000588216 CEP170Q5SW79 1584 aa17.82■□□□□ 0.44
TNPO2-210ENST00000588216 CFAP43Q8NDM7 1665 aa17.82■□□□□ 0.44
TNPO2-210ENST00000588216 DISP1Q96F81 1524 aa17.81■□□□□ 0.44
TNPO2-210ENST00000588216 UGGT2Q9NYU1 1516 aa17.8■□□□□ 0.44
TNPO2-210ENST00000588216 LRRIQ1Q96JM4 1722 aa17.79■□□□□ 0.44
TNPO2-210ENST00000588216 CDK13Q14004 1512 aaKnown RBP17.78■□□□□ 0.44
TNPO2-210ENST00000588216 KIAA0556O60303 1618 aa17.75■□□□□ 0.43
TNPO2-210ENST00000588216 EPRSP07814 1512 aaKnown RBP17.74■□□□□ 0.43
TNPO2-210ENST00000588216 NUP160Q12769 1436 aa17.74■□□□□ 0.43
TNPO2-210ENST00000588216 MAGI3Q5TCQ9 1506 aa17.74■□□□□ 0.43
TNPO2-210ENST00000588216 NCOA2Q15596 1464 aa17.73■□□□□ 0.43
TNPO2-210ENST00000588216 PLB1Q6P1J6 1458 aa17.72■□□□□ 0.43
TNPO2-210ENST00000588216 RAB3GAP2Q9H2M9 1393 aa17.71■□□□□ 0.43
TNPO2-210ENST00000588216 DHX57Q6P158 1386 aaKnown RBP17.7■□□□□ 0.42
TNPO2-210ENST00000588216 FGD6Q6ZV73 1430 aa17.7■□□□□ 0.42
TNPO2-210ENST00000588216 CARMIL2Q6F5E8 1435 aa17.69■□□□□ 0.42
TNPO2-210ENST00000588216 HECW1Q76N89 1606 aa17.69■□□□□ 0.42
TNPO2-210ENST00000588216 CHIC2Q9UKJ5 165 aa17.69■□□□□ 0.42
TNPO2-210ENST00000588216 CCDC18Q5T9S5 1454 aa17.68■□□□□ 0.42
TNPO2-210ENST00000588216 NUP153P49790 1475 aaKnown RBP17.67■□□□□ 0.42
TNPO2-210ENST00000588216 PRG4Q92954 1404 aaPredicted RBP17.66■□□□□ 0.42
TNPO2-210ENST00000588216 MYOM3Q5VTT5 1437 aa17.65■□□□□ 0.42
TNPO2-210ENST00000588216 EHBP1L1Q8N3D4 1523 aa17.64■□□□□ 0.41
TNPO2-210ENST00000588216 SETD5Q9C0A6 1442 aa17.64■□□□□ 0.41
TNPO2-210ENST00000588216 CDK11AQ9UQ88 783 aaPredicted RBP17.63■□□□□ 0.41
TNPO2-210ENST00000588216 SUPT6HQ7KZ85 1726 aaKnown RBP17.62■□□□□ 0.41
TNPO2-210ENST00000588216 PTPRKQ15262 1439 aa17.61■□□□□ 0.41
TNPO2-210ENST00000588216 RAPGEF6Q8TEU7 1601 aa17.61■□□□□ 0.41
TNPO2-210ENST00000588216 CHD1O14646 1710 aa17.61■□□□□ 0.41
TNPO2-210ENST00000588216 RRP7BPQ9NSQ0 103 aa17.61■□□□□ 0.41
TNPO2-210ENST00000588216 ZNF316A6NFI3 1004 aaPredicted RBP17.61■□□□□ 0.41
TNPO2-210ENST00000588216 ZNF644Q9H582 1327 aaPredicted RBP17.6■□□□□ 0.41
TNPO2-210ENST00000588216 ZNF777Q9ULD5 760 aaPredicted RBP17.6■□□□□ 0.41
TNPO2-210ENST00000588216 PTPRGP23470 1445 aa17.58■□□□□ 0.4
TNPO2-210ENST00000588216 PLEKHD1A6NEE1 506 aa17.55■□□□□ 0.4
TNPO2-210ENST00000588216 YTHDC1Q96MU7 727 aaKnown RBP17.54■□□□□ 0.4
TNPO2-210ENST00000588216 SIN3AQ96ST3 1273 aa17.54■□□□□ 0.4
TNPO2-210ENST00000588216 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.54■□□□□ 0.42e-6■■■■□ 21.9
TNPO2-210ENST00000588216 PTPN23Q9H3S7 1636 aa17.53■□□□□ 0.4
TNPO2-210ENST00000588216 ARHGEF11O15085 1522 aa17.52■□□□□ 0.4
TNPO2-210ENST00000588216 ERCC6L2Q5T890 1561 aa17.51■□□□□ 0.39
TNPO2-210ENST00000588216 BCL11AQ9H165 835 aa17.51■□□□□ 0.39
TNPO2-210ENST00000588216 CFDP1Q9UEE9 299 aaPredicted RBP17.51■□□□□ 0.39
TNPO2-210ENST00000588216 TROQ12816 1431 aaPredicted RBP17.49■□□□□ 0.39
TNPO2-210ENST00000588216 CLSPNQ9HAW4 1339 aa17.49■□□□□ 0.39
TNPO2-210ENST00000588216 ATP10BO94823 1461 aa17.49■□□□□ 0.39
TNPO2-210ENST00000588216 ANP32EQ9BTT0 268 aa17.47■□□□□ 0.39
TNPO2-210ENST00000588216 TRIM52Q96A61 297 aa17.47■□□□□ 0.39
TNPO2-210ENST00000588216 KCNH8Q96L42 1107 aa17.45■□□□□ 0.38
TNPO2-210ENST00000588216 NAIPQ13075 1403 aa17.45■□□□□ 0.38
TNPO2-210ENST00000588216 ABCA8O94911 1581 aa17.44■□□□□ 0.38
TNPO2-210ENST00000588216 MIER1Q8N108 512 aa17.44■□□□□ 0.38
TNPO2-210ENST00000588216 KIF14Q15058 1648 aa17.44■□□□□ 0.38
TNPO2-210ENST00000588216 MAPKBP1O60336 1514 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms