RNA–Protein interactions for RNA: ENST00000588161.5

RBM42-203, Transcript of RNA binding motif protein 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RBM42, Length 1,609 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM42-203ENST00000588161 RANGAP1P46060 587 aaPredicted RBP35.11■■■■□ 3.21
RBM42-203ENST00000588161 FBLN2P98095 1184 aa35.11■■■■□ 3.21
RBM42-203ENST00000588161 NUP160Q12769 1436 aa35.02■■■■□ 3.2
RBM42-203ENST00000588161 KIAA0586Q9BVV6 1533 aa35.02■■■■□ 3.2
RBM42-203ENST00000588161 ARHGAP35Q9NRY4 1499 aa35.02■■■■□ 3.2
RBM42-203ENST00000588161 IQGAP2Q13576 1575 aa35■■■■□ 3.19
RBM42-203ENST00000588161 CEP170Q5SW79 1584 aa34.98■■■■□ 3.19
RBM42-203ENST00000588161 EFCAB5A4FU69 1503 aa34.96■■■■□ 3.19
RBM42-203ENST00000588161 CHD1O14646 1710 aa34.95■■■■□ 3.19
RBM42-203ENST00000588161 ARAP1Q96P48 1450 aa34.93■■■■□ 3.18
RBM42-203ENST00000588161 VPS8Q8N3P4 1428 aa34.89■■■■□ 3.18
RBM42-203ENST00000588161 UGGT2Q9NYU1 1516 aa34.86■■■■□ 3.17
RBM42-203ENST00000588161 SAMD9Q5K651 1589 aa34.86■■■■□ 3.17
RBM42-203ENST00000588161 P3H3Q8IVL6 736 aa34.77■■■■□ 3.16
RBM42-203ENST00000588161 FHOD3Q2V2M9 1422 aa34.74■■■■□ 3.15
RBM42-203ENST00000588161 JPH4Q96JJ6 628 aa34.73■■■■□ 3.15
RBM42-203ENST00000588161 DISP1Q96F81 1524 aa34.68■■■■□ 3.14
RBM42-203ENST00000588161 FMN1Q68DA7 1419 aa34.64■■■■□ 3.14
RBM42-203ENST00000588161 KIAA0556O60303 1618 aa34.64■■■■□ 3.14
RBM42-203ENST00000588161 CLASP1Q7Z460 1538 aa34.62■■■■□ 3.13
RBM42-203ENST00000588161 CARMIL2Q6F5E8 1435 aa34.61■■■■□ 3.13
RBM42-203ENST00000588161 SHROOM2Q13796 1616 aa34.57■■■■□ 3.13
RBM42-203ENST00000588161 APLP2Q06481 763 aa34.54■■■■□ 3.12
RBM42-203ENST00000588161 CASKIN1Q8WXD9 1431 aa34.52■■■■□ 3.12
RBM42-203ENST00000588161 PRG4Q92954 1404 aaPredicted RBP34.52■■■■□ 3.12
RBM42-203ENST00000588161 OSCARQ8IYS5 282 aa34.51■■■■□ 3.11
RBM42-203ENST00000588161 PCF11O94913 1555 aaKnown RBP34.49■■■■□ 3.11
RBM42-203ENST00000588161 FYCO1Q9BQS8 1478 aa34.49■■■■□ 3.11
RBM42-203ENST00000588161 MAP3K1Q13233 1512 aa34.4■■■■□ 3.1
RBM42-203ENST00000588161 PPARGC1BQ86YN6 1023 aaKnown RBP34.37■■■■□ 3.09
RBM42-203ENST00000588161 ATP1B4Q9UN42 357 aaPredicted RBP34.35■■■■□ 3.09
RBM42-203ENST00000588161 TIAM1Q13009 1591 aa34.31■■■■□ 3.08
RBM42-203ENST00000588161 TTBK1Q5TCY1 1321 aaPredicted RBP34.31■■■■□ 3.08
RBM42-203ENST00000588161 HECW1Q76N89 1606 aa34.3■■■■□ 3.08
RBM42-203ENST00000588161 PTPRGP23470 1445 aa34.29■■■■□ 3.08
RBM42-203ENST00000588161 ERCC6L2Q5T890 1561 aa34.28■■■■□ 3.08
RBM42-203ENST00000588161 RAPGEF6Q8TEU7 1601 aa34.26■■■■□ 3.07
RBM42-203ENST00000588161 CFAP43Q8NDM7 1665 aa34.25■■■■□ 3.07
RBM42-203ENST00000588161 KANK4Q5T7N3 995 aaPredicted RBP34.22■■■■□ 3.07
RBM42-203ENST00000588161 CCDC18Q5T9S5 1454 aa34.22■■■■□ 3.07
RBM42-203ENST00000588161 PLB1Q6P1J6 1458 aa34.21■■■■□ 3.07
RBM42-203ENST00000588161 TRIM26Q12899 539 aaPredicted RBP34.19■■■■□ 3.06
RBM42-203ENST00000588161 ABCA8O94911 1581 aa34.19■■■■□ 3.06
RBM42-203ENST00000588161 LRRIQ1Q96JM4 1722 aa34.18■■■■□ 3.06
RBM42-203ENST00000588161 EPRSP07814 1512 aaKnown RBP34.18■■■■□ 3.06
RBM42-203ENST00000588161 NUP153P49790 1475 aaKnown RBP34.17■■■■□ 3.06
RBM42-203ENST00000588161 LRRC9Q6ZRR7 1453 aa34.17■■■■□ 3.06
RBM42-203ENST00000588161 UACAQ9BZF9 1416 aa34.09■■■■□ 3.05
RBM42-203ENST00000588161 CDK13Q14004 1512 aaKnown RBP34.05■■■■□ 3.04
RBM42-203ENST00000588161 MTUS2Q5JR59 1369 aa34.03■■■■□ 3.04
RBM42-203ENST00000588161 ARID3CA6NKF2 412 aa33.99■■■■□ 3.03
RBM42-203ENST00000588161 PCGF6Q9BYE7 350 aa33.99■■■■□ 3.03
RBM42-203ENST00000588161 ABCC2Q92887 1545 aa33.99■■■■□ 3.03
RBM42-203ENST00000588161 EHBP1L1Q8N3D4 1523 aa33.98■■■■□ 3.03
RBM42-203ENST00000588161 CDK11AQ9UQ88 783 aaPredicted RBP33.97■■■■□ 3.03
RBM42-203ENST00000588161 UHRF1BP1LA0JNW5 1464 aa33.97■■■■□ 3.03
RBM42-203ENST00000588161 ATP10BO94823 1461 aa33.95■■■■□ 3.03
RBM42-203ENST00000588161 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.94■■■■□ 3.02
RBM42-203ENST00000588161 HNRNPUL2Q1KMD3 747 aaKnown RBP33.94■■■■□ 3.02
RBM42-203ENST00000588161 MAGI3Q5TCQ9 1506 aa33.93■■■■□ 3.02
RBM42-203ENST00000588161 ARHGEF11O15085 1522 aa33.89■■■■□ 3.02
RBM42-203ENST00000588161 SUPT6HQ7KZ85 1726 aaKnown RBP33.85■■■■□ 3.01
RBM42-203ENST00000588161 TROQ12816 1431 aaPredicted RBP33.82■■■■□ 3.01
RBM42-203ENST00000588161 NCOA2Q15596 1464 aa33.81■■■■□ 3
RBM42-203ENST00000588161 PHLDB1Q86UU1 1377 aa33.81■■■■□ 3
RBM42-203ENST00000588161 PLEKHD1A6NEE1 506 aa33.81■■■■□ 3
RBM42-203ENST00000588161 KDM5BQ9UGL1 1544 aa33.8■■■■□ 3
RBM42-203ENST00000588161 RRBP1Q9P2E9 1410 aaKnown RBP33.78■■■■□ 3
RBM42-203ENST00000588161 ADCY10Q96PN6 1610 aa33.78■■■■□ 3
RBM42-203ENST00000588161 RIMBP3CA6NJZ7 1639 aa33.73■■■□□ 2.99
RBM42-203ENST00000588161 RIMBP3BA6NNM3 1639 aa33.73■■■□□ 2.99
RBM42-203ENST00000588161 RIMBP3Q9UFD9 1639 aa33.73■■■□□ 2.99
RBM42-203ENST00000588161 ZCCHC11Q5TAX3 1644 aaKnown RBP33.72■■■□□ 2.99
RBM42-203ENST00000588161 CCNB3Q8WWL7 1395 aa33.7■■■□□ 2.99
RBM42-203ENST00000588161 MYOM3Q5VTT5 1437 aa33.67■■■□□ 2.98
RBM42-203ENST00000588161 FGD6Q6ZV73 1430 aa33.62■■■□□ 2.97
RBM42-203ENST00000588161 KIF14Q15058 1648 aa33.62■■■□□ 2.97
RBM42-203ENST00000588161 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.58■■■□□ 2.97
RBM42-203ENST00000588161 NPM1P06748 294 aaKnown RBP eCLIP33.57■■■□□ 2.97
RBM42-203ENST00000588161 CYB5RLQ6IPT4 315 aa33.56■■■□□ 2.96
RBM42-203ENST00000588161 MIA2Q96PC5 1412 aa33.56■■■□□ 2.96
RBM42-203ENST00000588161 ABCC10Q5T3U5 1492 aa33.54■■■□□ 2.96
RBM42-203ENST00000588161 FAM50AQ14320 339 aaKnown RBP33.5■■■□□ 2.95
RBM42-203ENST00000588161 GPATCH8Q9UKJ3 1502 aaKnown RBP33.49■■■□□ 2.95
RBM42-203ENST00000588161 WDR7Q9Y4E6 1490 aa33.48■■■□□ 2.95
RBM42-203ENST00000588161 ITSN2Q9NZM3 1697 aa33.47■■■□□ 2.95
RBM42-203ENST00000588161 PTPN23Q9H3S7 1636 aa33.46■■■□□ 2.95
RBM42-203ENST00000588161 TCOF1Q13428 1488 aaKnown RBP33.46■■■□□ 2.95
RBM42-203ENST00000588161 ASXL2Q76L83 1435 aa33.44■■■□□ 2.94
RBM42-203ENST00000588161 KCNH8Q96L42 1107 aa33.43■■■□□ 2.94
RBM42-203ENST00000588161 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.42■■■□□ 2.94
RBM42-203ENST00000588161 CFDP1Q9UEE9 299 aaPredicted RBP33.4■■■□□ 2.94
RBM42-203ENST00000588161 CDC42BPAQ5VT25 1732 aa33.39■■■□□ 2.94
RBM42-203ENST00000588161 TTC37Q6PGP7 1564 aa33.36■■■□□ 2.93
RBM42-203ENST00000588161 ITGAEP38570 1179 aa33.32■■■□□ 2.92
RBM42-203ENST00000588161 PREX2Q70Z35 1606 aa33.31■■■□□ 2.92
RBM42-203ENST00000588161 MAPKBP1O60336 1514 aa33.31■■■□□ 2.92
RBM42-203ENST00000588161 MYO5CQ9NQX4 1742 aa33.27■■■□□ 2.92
RBM42-203ENST00000588161 CAMSAP2Q08AD1 1489 aa33.27■■■□□ 2.92
RBM42-203ENST00000588161 ZNF644Q9H582 1327 aaPredicted RBP33.27■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms