RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 RUSC2Q8N2Y8 1516 aa17■□□□□ 0.31
TPM4-207ENST00000588032 JPH4Q96JJ6 628 aa16.99■□□□□ 0.31
TPM4-207ENST00000588032 ARAP1Q96P48 1450 aa16.98■□□□□ 0.31
TPM4-207ENST00000588032 KIAA0586Q9BVV6 1533 aa16.97■□□□□ 0.31
TPM4-207ENST00000588032 RAPGEF2Q9Y4G8 1499 aa16.96■□□□□ 0.31
TPM4-207ENST00000588032 SHROOM2Q13796 1616 aa16.96■□□□□ 0.3
TPM4-207ENST00000588032 EEA1Q15075 1411 aa16.92■□□□□ 0.3
TPM4-207ENST00000588032 PRG4Q92954 1404 aaPredicted RBP16.92■□□□□ 0.3
TPM4-207ENST00000588032 CSRNP3Q8WYN3 585 aa16.91■□□□□ 0.3
TPM4-207ENST00000588032 POTEDQ86YR6 584 aa16.89■□□□□ 0.29
TPM4-207ENST00000588032 PRXQ9BXM0 1461 aa16.88■□□□□ 0.29
TPM4-207ENST00000588032 ERCC6L2Q5T890 1561 aa16.86■□□□□ 0.29
TPM4-207ENST00000588032 IQGAP2Q13576 1575 aa16.82■□□□□ 0.28
TPM4-207ENST00000588032 CARMIL2Q6F5E8 1435 aa16.81■□□□□ 0.28
TPM4-207ENST00000588032 FAM9AQ8IZU1 332 aaPredicted RBP16.78■□□□□ 0.28
TPM4-207ENST00000588032 UGGT2Q9NYU1 1516 aa16.75■□□□□ 0.27
TPM4-207ENST00000588032 TNIKQ9UKE5 1360 aa16.75■□□□□ 0.27
TPM4-207ENST00000588032 PTPRGP23470 1445 aa16.74■□□□□ 0.27
TPM4-207ENST00000588032 CTTNBP2Q8WZ74 1663 aa16.71■□□□□ 0.27
TPM4-207ENST00000588032 DISP1Q96F81 1524 aa16.7■□□□□ 0.26
TPM4-207ENST00000588032 GOLGA3Q08378 1498 aa16.7■□□□□ 0.26
TPM4-207ENST00000588032 NPM1P06748 294 aaKnown RBP eCLIP16.7■□□□□ 0.26
TPM4-207ENST00000588032 TRHP20396 242 aaPredicted RBP16.7■□□□□ 0.26
TPM4-207ENST00000588032 FOXD1Q16676 465 aa16.67■□□□□ 0.26
TPM4-207ENST00000588032 KIF21BO75037 1637 aa16.67■□□□□ 0.26
TPM4-207ENST00000588032 KIAA0556O60303 1618 aa16.65■□□□□ 0.26
TPM4-207ENST00000588032 TTBK1Q5TCY1 1321 aaPredicted RBP16.65■□□□□ 0.26
TPM4-207ENST00000588032 UACAQ9BZF9 1416 aa16.62■□□□□ 0.25
TPM4-207ENST00000588032 UHRF1BP1LA0JNW5 1464 aa16.61■□□□□ 0.25
TPM4-207ENST00000588032 ADCY10Q96PN6 1610 aa16.6■□□□□ 0.25
TPM4-207ENST00000588032 UBTFP17480 764 aaKnown RBP16.6■□□□□ 0.25
TPM4-207ENST00000588032 ABCC2Q92887 1545 aa16.56■□□□□ 0.24
TPM4-207ENST00000588032 MAPKBP1O60336 1514 aa16.55■□□□□ 0.24
TPM4-207ENST00000588032 P3H3Q8IVL6 736 aa16.54■□□□□ 0.24
TPM4-207ENST00000588032 SAMD9Q5K651 1589 aa16.52■□□□□ 0.24
TPM4-207ENST00000588032 KDM5BQ9UGL1 1544 aa16.51■□□□□ 0.23
TPM4-207ENST00000588032 RANGAP1P46060 587 aaPredicted RBP16.51■□□□□ 0.23
TPM4-207ENST00000588032 EHMT2Q96KQ7 1210 aa16.51■□□□□ 0.23
TPM4-207ENST00000588032 PLB1Q6P1J6 1458 aa16.5■□□□□ 0.23
TPM4-207ENST00000588032 ABCC10Q5T3U5 1492 aa16.49■□□□□ 0.23
TPM4-207ENST00000588032 EFCAB5A4FU69 1503 aa16.49■□□□□ 0.23
TPM4-207ENST00000588032 ABCA8O94911 1581 aa16.48■□□□□ 0.23
TPM4-207ENST00000588032 FAM69CQ0P6D2 419 aa16.48■□□□□ 0.23
TPM4-207ENST00000588032 ASXL2Q76L83 1435 aa16.46■□□□□ 0.23
TPM4-207ENST00000588032 FHOD3Q2V2M9 1422 aa16.44■□□□□ 0.22
TPM4-207ENST00000588032 DIP2BQ9P265 1576 aa16.42■□□□□ 0.22
TPM4-207ENST00000588032 ZCCHC11Q5TAX3 1644 aaKnown RBP16.41■□□□□ 0.22
TPM4-207ENST00000588032 KIF13AQ9H1H9 1805 aa16.4■□□□□ 0.22
TPM4-207ENST00000588032 RAPGEF6Q8TEU7 1601 aa16.38■□□□□ 0.21
TPM4-207ENST00000588032 ATP10BO94823 1461 aa16.38■□□□□ 0.21
TPM4-207ENST00000588032 ARHGAP35Q9NRY4 1499 aa16.38■□□□□ 0.21
TPM4-207ENST00000588032 FMN1Q68DA7 1419 aa16.37■□□□□ 0.21
TPM4-207ENST00000588032 WDR7Q9Y4E6 1490 aa16.37■□□□□ 0.21
TPM4-207ENST00000588032 GLI2P10070 1586 aa16.37■□□□□ 0.21
TPM4-207ENST00000588032 EPRSP07814 1512 aaKnown RBP16.36■□□□□ 0.21
TPM4-207ENST00000588032 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.34■□□□□ 0.21
TPM4-207ENST00000588032 HNRNPUL2Q1KMD3 747 aaKnown RBP16.34■□□□□ 0.21
TPM4-207ENST00000588032 NUP153P49790 1475 aaKnown RBP16.34■□□□□ 0.21
TPM4-207ENST00000588032 ARID3CA6NKF2 412 aa16.33■□□□□ 0.2
TPM4-207ENST00000588032 KCNH8Q96L42 1107 aa16.32■□□□□ 0.2
TPM4-207ENST00000588032 PLEKHD1A6NEE1 506 aa16.3■□□□□ 0.2
TPM4-207ENST00000588032 CLIP1P30622 1438 aa16.29■□□□□ 0.2
TPM4-207ENST00000588032 ATP1B4Q9UN42 357 aaPredicted RBP16.27■□□□□ 0.2
TPM4-207ENST00000588032 TEX14Q8IWB6 1497 aa16.25■□□□□ 0.19
TPM4-207ENST00000588032 CDK11AQ9UQ88 783 aaPredicted RBP16.25■□□□□ 0.19
TPM4-207ENST00000588032 MAP3K4Q9Y6R4 1608 aa16.25■□□□□ 0.19
TPM4-207ENST00000588032 CD109Q6YHK3 1445 aa16.25■□□□□ 0.19
TPM4-207ENST00000588032 HECW1Q76N89 1606 aa16.24■□□□□ 0.19
TPM4-207ENST00000588032 TSPOAP1O95153 1857 aa16.23■□□□□ 0.19
TPM4-207ENST00000588032 LOC105371045A0A1W2PR82 267 aa16.23■□□□□ 0.19
TPM4-207ENST00000588032 CASKIN1Q8WXD9 1431 aa16.22■□□□□ 0.19
TPM4-207ENST00000588032 MAGI3Q5TCQ9 1506 aa16.22■□□□□ 0.19
TPM4-207ENST00000588032 CFAP43Q8NDM7 1665 aa16.21■□□□□ 0.19
TPM4-207ENST00000588032 CEP162Q5TB80 1403 aa16.2■□□□□ 0.18
TPM4-207ENST00000588032 PPRC1Q5VV67 1664 aaKnown RBP16.18■□□□□ 0.18
TPM4-207ENST00000588032 ABCA9Q8IUA7 1624 aa16.18■□□□□ 0.18
TPM4-207ENST00000588032 CDK13Q14004 1512 aaKnown RBP16.18■□□□□ 0.18
TPM4-207ENST00000588032 KDM6BO15054 1643 aa16.17■□□□□ 0.18
TPM4-207ENST00000588032 CCDC18Q5T9S5 1454 aa16.16■□□□□ 0.18
TPM4-207ENST00000588032 FYCO1Q9BQS8 1478 aa16.16■□□□□ 0.18
TPM4-207ENST00000588032 PHLDB1Q86UU1 1377 aa16.16■□□□□ 0.18
TPM4-207ENST00000588032 PCF11O94913 1555 aaKnown RBP16.13■□□□□ 0.17
TPM4-207ENST00000588032 TROQ12816 1431 aaPredicted RBP16.12■□□□□ 0.17
TPM4-207ENST00000588032 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.1■□□□□ 0.17
TPM4-207ENST00000588032 NEO1Q92859 1461 aa16.1■□□□□ 0.17
TPM4-207ENST00000588032 COL17A1Q9UMD9 1497 aaPredicted RBP16.1■□□□□ 0.17
TPM4-207ENST00000588032 ARAP3Q8WWN8 1544 aa16.08■□□□□ 0.16
TPM4-207ENST00000588032 LRRIQ1Q96JM4 1722 aa16.06■□□□□ 0.16
TPM4-207ENST00000588032 PLCH2O75038 1416 aa16.06■□□□□ 0.16
TPM4-207ENST00000588032 KIF14Q15058 1648 aa16.05■□□□□ 0.16
TPM4-207ENST00000588032 FANCAO15360 1455 aa16.04■□□□□ 0.16
TPM4-207ENST00000588032 TTC37Q6PGP7 1564 aa16.04■□□□□ 0.16
TPM4-207ENST00000588032 EFCAB2Q5VUJ9 269 aa16.03■□□□□ 0.16
TPM4-207ENST00000588032 VPS8Q8N3P4 1428 aa16.02■□□□□ 0.16
TPM4-207ENST00000588032 AKNAQ7Z591 1439 aa16.02■□□□□ 0.15
TPM4-207ENST00000588032 CFAP74Q9C0B2 1584 aa16.01■□□□□ 0.15
TPM4-207ENST00000588032 MTUS2Q5JR59 1369 aa16■□□□□ 0.15
TPM4-207ENST00000588032 RAPGEF3O95398 923 aa15.98■□□□□ 0.15
TPM4-207ENST00000588032 DENND4BO75064 1496 aaPredicted RBP15.97■□□□□ 0.15
TPM4-207ENST00000588032 MYO5CQ9NQX4 1742 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms