RNA–Protein interactions for RNA: ENST00000587739.1

CHAF1A-206, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 5

Gene CHAF1A, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-206ENST00000587739 CUL7Q14999 1698 aa16.34■□□□□ 0.21
CHAF1A-206ENST00000587739 PRXQ9BXM0 1461 aa16.34■□□□□ 0.21
CHAF1A-206ENST00000587739 RAPGEF2Q9Y4G8 1499 aa16.31■□□□□ 0.2
CHAF1A-206ENST00000587739 EEA1Q15075 1411 aa16.28■□□□□ 0.2
CHAF1A-206ENST00000587739 JPH4Q96JJ6 628 aa16.28■□□□□ 0.2
CHAF1A-206ENST00000587739 TRHP20396 242 aaPredicted RBP16.26■□□□□ 0.19
CHAF1A-206ENST00000587739 KIAA0586Q9BVV6 1533 aa16.25■□□□□ 0.19
CHAF1A-206ENST00000587739 ERCC6L2Q5T890 1561 aa16.24■□□□□ 0.19
CHAF1A-206ENST00000587739 SHROOM2Q13796 1616 aa16.21■□□□□ 0.19
CHAF1A-206ENST00000587739 PRG4Q92954 1404 aaPredicted RBP16.19■□□□□ 0.18
CHAF1A-206ENST00000587739 EHMT2Q96KQ7 1210 aa16.17■□□□□ 0.18
CHAF1A-206ENST00000587739 IQGAP2Q13576 1575 aa16.12■□□□□ 0.17
CHAF1A-206ENST00000587739 KIF21BO75037 1637 aa16.12■□□□□ 0.17
CHAF1A-206ENST00000587739 DISP1Q96F81 1524 aa16.09■□□□□ 0.17
CHAF1A-206ENST00000587739 UGGT2Q9NYU1 1516 aa16.09■□□□□ 0.17
CHAF1A-206ENST00000587739 CTTNBP2Q8WZ74 1663 aa16.06■□□□□ 0.16
CHAF1A-206ENST00000587739 UBTFP17480 764 aaKnown RBP16.06■□□□□ 0.16
CHAF1A-206ENST00000587739 GOLGA3Q08378 1498 aa16.04■□□□□ 0.16
CHAF1A-206ENST00000587739 LOC105371045A0A1W2PR82 267 aa16.03■□□□□ 0.16
CHAF1A-206ENST00000587739 RANGAP1P46060 587 aaPredicted RBP16.02■□□□□ 0.16
CHAF1A-206ENST00000587739 P3H3Q8IVL6 736 aa16.02■□□□□ 0.16
CHAF1A-206ENST00000587739 TNIKQ9UKE5 1360 aa16.01■□□□□ 0.15
CHAF1A-206ENST00000587739 TTBK1Q5TCY1 1321 aaPredicted RBP16.01■□□□□ 0.15
CHAF1A-206ENST00000587739 PTPRGP23470 1445 aa16.01■□□□□ 0.15
CHAF1A-206ENST00000587739 CARMIL2Q6F5E8 1435 aa16.01■□□□□ 0.15
CHAF1A-206ENST00000587739 KIAA0556O60303 1618 aa15.98■□□□□ 0.15
CHAF1A-206ENST00000587739 SAMD9Q5K651 1589 aa15.93■□□□□ 0.14
CHAF1A-206ENST00000587739 ADCY10Q96PN6 1610 aa15.9■□□□□ 0.14
CHAF1A-206ENST00000587739 KIF13AQ9H1H9 1805 aa15.89■□□□□ 0.13
CHAF1A-206ENST00000587739 FHOD3Q2V2M9 1422 aa15.89■□□□□ 0.13
CHAF1A-206ENST00000587739 UACAQ9BZF9 1416 aa15.89■□□□□ 0.13
CHAF1A-206ENST00000587739 ARHGAP35Q9NRY4 1499 aa15.89■□□□□ 0.13
CHAF1A-206ENST00000587739 PLB1Q6P1J6 1458 aa15.88■□□□□ 0.13
CHAF1A-206ENST00000587739 UHRF1BP1LA0JNW5 1464 aa15.85■□□□□ 0.13
CHAF1A-206ENST00000587739 ABCA8O94911 1581 aa15.84■□□□□ 0.13
CHAF1A-206ENST00000587739 EFCAB5A4FU69 1503 aa15.82■□□□□ 0.12
CHAF1A-206ENST00000587739 ABCC2Q92887 1545 aa15.82■□□□□ 0.12
CHAF1A-206ENST00000587739 AEBP2Q6ZN18 517 aaPredicted RBP15.81■□□□□ 0.12
CHAF1A-206ENST00000587739 NPM1P06748 294 aaKnown RBP eCLIP15.8■□□□□ 0.12
CHAF1A-206ENST00000587739 KDM5BQ9UGL1 1544 aa15.79■□□□□ 0.12
CHAF1A-206ENST00000587739 CLIP1P30622 1438 aa15.79■□□□□ 0.12
CHAF1A-206ENST00000587739 ARID3CA6NKF2 412 aa15.78■□□□□ 0.12
CHAF1A-206ENST00000587739 ATP10BO94823 1461 aa15.77■□□□□ 0.11
CHAF1A-206ENST00000587739 CEP162Q5TB80 1403 aa15.76■□□□□ 0.11
CHAF1A-206ENST00000587739 NUP153P49790 1475 aaKnown RBP15.74■□□□□ 0.11
CHAF1A-206ENST00000587739 TSPOAP1O95153 1857 aa15.74■□□□□ 0.11
CHAF1A-206ENST00000587739 RAPGEF6Q8TEU7 1601 aa15.73■□□□□ 0.11
CHAF1A-206ENST00000587739 ASXL2Q76L83 1435 aa15.73■□□□□ 0.11
CHAF1A-206ENST00000587739 MAPKBP1O60336 1514 aa15.73■□□□□ 0.11
CHAF1A-206ENST00000587739 ZCCHC11Q5TAX3 1644 aaKnown RBP15.72■□□□□ 0.11
CHAF1A-206ENST00000587739 FAM69CQ0P6D2 419 aa15.71■□□□□ 0.11
CHAF1A-206ENST00000587739 FMN1Q68DA7 1419 aa15.7■□□□□ 0.1
CHAF1A-206ENST00000587739 DIP2BQ9P265 1576 aa15.7■□□□□ 0.1
CHAF1A-206ENST00000587739 ABCC10Q5T3U5 1492 aa15.69■□□□□ 0.1
CHAF1A-206ENST00000587739 ATP1B4Q9UN42 357 aaPredicted RBP15.68■□□□□ 0.1
CHAF1A-206ENST00000587739 KCNH8Q96L42 1107 aa15.66■□□□□ 0.1
CHAF1A-206ENST00000587739 CASKIN1Q8WXD9 1431 aa15.66■□□□□ 0.1
CHAF1A-206ENST00000587739 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.64■□□□□ 0.09
CHAF1A-206ENST00000587739 HNRNPUL2Q1KMD3 747 aaKnown RBP15.64■□□□□ 0.09
CHAF1A-206ENST00000587739 EPRSP07814 1512 aaKnown RBP15.63■□□□□ 0.09
CHAF1A-206ENST00000587739 CDK13Q14004 1512 aaKnown RBP15.63■□□□□ 0.09
CHAF1A-206ENST00000587739 LRRIQ1Q96JM4 1722 aa15.63■□□□□ 0.09
CHAF1A-206ENST00000587739 WDR7Q9Y4E6 1490 aa15.62■□□□□ 0.09
CHAF1A-206ENST00000587739 PLEKHD1A6NEE1 506 aa15.61■□□□□ 0.09
CHAF1A-206ENST00000587739 PCF11O94913 1555 aaKnown RBP15.61■□□□□ 0.09
CHAF1A-206ENST00000587739 KDM6BO15054 1643 aa15.59■□□□□ 0.09
CHAF1A-206ENST00000587739 GLI2P10070 1586 aa15.58■□□□□ 0.09
CHAF1A-206ENST00000587739 HECW1Q76N89 1606 aa15.57■□□□□ 0.08
CHAF1A-206ENST00000587739 FYCO1Q9BQS8 1478 aa15.56■□□□□ 0.08
CHAF1A-206ENST00000587739 VPS8Q8N3P4 1428 aa15.55■□□□□ 0.08
CHAF1A-206ENST00000587739 MAGI3Q5TCQ9 1506 aa15.54■□□□□ 0.08
CHAF1A-206ENST00000587739 PPRC1Q5VV67 1664 aaKnown RBP15.53■□□□□ 0.08
CHAF1A-206ENST00000587739 CDK11AQ9UQ88 783 aaPredicted RBP15.51■□□□□ 0.07
CHAF1A-206ENST00000587739 CD109Q6YHK3 1445 aa15.51■□□□□ 0.07
CHAF1A-206ENST00000587739 MAP3K4Q9Y6R4 1608 aa15.5■□□□□ 0.07
CHAF1A-206ENST00000587739 TROQ12816 1431 aaPredicted RBP15.5■□□□□ 0.07
CHAF1A-206ENST00000587739 CCDC18Q5T9S5 1454 aa15.49■□□□□ 0.07
CHAF1A-206ENST00000587739 KANK4Q5T7N3 995 aaPredicted RBP15.48■□□□□ 0.07
CHAF1A-206ENST00000587739 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.48■□□□□ 0.07
CHAF1A-206ENST00000587739 ABCA9Q8IUA7 1624 aa15.47■□□□□ 0.07
CHAF1A-206ENST00000587739 COL17A1Q9UMD9 1497 aaPredicted RBP15.46■□□□□ 0.07
CHAF1A-206ENST00000587739 KDM4FA0A1W2PPD8 638 aa15.45■□□□□ 0.06
CHAF1A-206ENST00000587739 KIF14Q15058 1648 aa15.45■□□□□ 0.06
CHAF1A-206ENST00000587739 CFAP43Q8NDM7 1665 aa15.44■□□□□ 0.06
CHAF1A-206ENST00000587739 TTC37Q6PGP7 1564 aa15.43■□□□□ 0.06
CHAF1A-206ENST00000587739 PLCH2O75038 1416 aa15.41■□□□□ 0.06
CHAF1A-206ENST00000587739 TIAM1Q13009 1591 aa15.4■□□□□ 0.06
CHAF1A-206ENST00000587739 MTUS2Q5JR59 1369 aa15.39■□□□□ 0.05
CHAF1A-206ENST00000587739 MAP3K1Q13233 1512 aa15.38■□□□□ 0.05
CHAF1A-206ENST00000587739 LRRC9Q6ZRR7 1453 aa15.38■□□□□ 0.05
CHAF1A-206ENST00000587739 TEX14Q8IWB6 1497 aa15.36■□□□□ 0.05
CHAF1A-206ENST00000587739 GPATCH8Q9UKJ3 1502 aaKnown RBP15.36■□□□□ 0.05
CHAF1A-206ENST00000587739 EFCAB2Q5VUJ9 269 aa15.34■□□□□ 0.05
CHAF1A-206ENST00000587739 AKNAQ7Z591 1439 aa15.34■□□□□ 0.05
CHAF1A-206ENST00000587739 RAPGEF3O95398 923 aa15.33■□□□□ 0.04
CHAF1A-206ENST00000587739 CDC42BPBQ9Y5S2 1711 aa15.33■□□□□ 0.04
CHAF1A-206ENST00000587739 FANCAO15360 1455 aa15.33■□□□□ 0.04
CHAF1A-206ENST00000587739 NEO1Q92859 1461 aa15.33■□□□□ 0.04
CHAF1A-206ENST00000587739 EHBP1L1Q8N3D4 1523 aa15.33■□□□□ 0.04
CHAF1A-206ENST00000587739 ARAP3Q8WWN8 1544 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms