RNA–Protein interactions for RNA: ENST00000587739.1

CHAF1A-206, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 5

Gene CHAF1A, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-206ENST00000587739 NISCHQ9Y2I1 1504 aa23.55■■□□□ 1.36
CHAF1A-206ENST00000587739 CCDC180Q9P1Z9 1646 aa20.75■□□□□ 0.91
CHAF1A-206ENST00000587739 ABCC9O60706 1549 aa20.44■□□□□ 0.86
CHAF1A-206ENST00000587739 DCAF8L2P0C7V8 631 aa19.68■□□□□ 0.74
CHAF1A-206ENST00000587739 ZCCHC6Q5VYS8 1495 aaKnown RBP19.61■□□□□ 0.73
CHAF1A-206ENST00000587739 NACADO15069 1562 aa19.53■□□□□ 0.72
CHAF1A-206ENST00000587739 RB1CC1Q8TDY2 1594 aa19.49■□□□□ 0.71
CHAF1A-206ENST00000587739 MYO15BQ96JP2 1530 aa19.46■□□□□ 0.71
CHAF1A-206ENST00000587739 DCAF1Q9Y4B6 1507 aa19.45■□□□□ 0.7
CHAF1A-206ENST00000587739 DNAJC5BQ9UF47 199 aa19.23■□□□□ 0.67
CHAF1A-206ENST00000587739 UNC13AQ9UPW8 1703 aa19.11■□□□□ 0.65
CHAF1A-206ENST00000587739 PABPN1Q86U42 306 aaKnown RBP eCLIP19.1■□□□□ 0.65
CHAF1A-206ENST00000587739 BICRAQ9NZM4 1560 aa19.02■□□□□ 0.64
CHAF1A-206ENST00000587739 SCRIBQ14160 1630 aa19.01■□□□□ 0.63
CHAF1A-206ENST00000587739 SHROOM4Q9ULL8 1493 aa18.74■□□□□ 0.59
CHAF1A-206ENST00000587739 CC2D2AQ9P2K1 1620 aa18.45■□□□□ 0.54
CHAF1A-206ENST00000587739 EIF4G1Q04637 1599 aaKnown RBP18.45■□□□□ 0.54
CHAF1A-206ENST00000587739 CECR2Q9BXF3 1484 aa18.42■□□□□ 0.54
CHAF1A-206ENST00000587739 MROH2BQ7Z745 1585 aa18.2■□□□□ 0.5
CHAF1A-206ENST00000587739 SMARCA4P51532 1647 aa18.2■□□□□ 0.5
CHAF1A-206ENST00000587739 BAZ1AQ9NRL2 1556 aaPredicted RBP18.17■□□□□ 0.5
CHAF1A-206ENST00000587739 ATAD2BQ9ULI0 1458 aa18.13■□□□□ 0.49
CHAF1A-206ENST00000587739 NCAPD3P42695 1498 aa18.09■□□□□ 0.49
CHAF1A-206ENST00000587739 RSF1Q96T23 1441 aaPredicted RBP18.05■□□□□ 0.48
CHAF1A-206ENST00000587739 PEG3Q9GZU2 1588 aa18.03■□□□□ 0.48
CHAF1A-206ENST00000587739 SMARCA2P51531 1590 aa18■□□□□ 0.47
CHAF1A-206ENST00000587739 WIZO95785 1651 aa17.97■□□□□ 0.47
CHAF1A-206ENST00000587739 HMGXB3Q12766 1538 aa17.93■□□□□ 0.46
CHAF1A-206ENST00000587739 BAZ1BQ9UIG0 1483 aaKnown RBP17.91■□□□□ 0.46
CHAF1A-206ENST00000587739 TOP2AP11388 1531 aaKnown RBP17.72■□□□□ 0.43
CHAF1A-206ENST00000587739 SUPT5HO00267 1087 aaKnown RBP17.71■□□□□ 0.43
CHAF1A-206ENST00000587739 NESP48681 1621 aa17.66■□□□□ 0.42
CHAF1A-206ENST00000587739 DNAJC5Q9H3Z4 198 aa17.62■□□□□ 0.41
CHAF1A-206ENST00000587739 CCDC88BA6NC98 1476 aa17.62■□□□□ 0.41
CHAF1A-206ENST00000587739 ERCC6Q03468 1493 aa17.62■□□□□ 0.41
CHAF1A-206ENST00000587739 CADPSQ9ULU8 1353 aa17.58■□□□□ 0.4
CHAF1A-206ENST00000587739 CUX2O14529 1486 aa17.53■□□□□ 0.4
CHAF1A-206ENST00000587739 LAMC3Q9Y6N6 1575 aa17.5■□□□□ 0.39
CHAF1A-206ENST00000587739 CFTRP13569 1480 aa17.49■□□□□ 0.39
CHAF1A-206ENST00000587739 PDS5BQ9NTI5 1447 aa17.4■□□□□ 0.38
CHAF1A-206ENST00000587739 KIF21AQ7Z4S6 1674 aa17.38■□□□□ 0.37
CHAF1A-206ENST00000587739 THOC2Q8NI27 1593 aaKnown RBP17.36■□□□□ 0.37
CHAF1A-206ENST00000587739 FANCD2Q9BXW9 1451 aa17.34■□□□□ 0.37
CHAF1A-206ENST00000587739 CEP164Q9UPV0 1460 aa17.25■□□□□ 0.35
CHAF1A-206ENST00000587739 PRDM2Q13029 1718 aa17.23■□□□□ 0.35
CHAF1A-206ENST00000587739 MRC2Q9UBG0 1479 aa17.22■□□□□ 0.35
CHAF1A-206ENST00000587739 URB2Q14146 1524 aaKnown RBP17.2■□□□□ 0.34
CHAF1A-206ENST00000587739 WDR62O43379 1518 aa17.16■□□□□ 0.34
CHAF1A-206ENST00000587739 TOPBP1Q92547 1522 aa17.09■□□□□ 0.33
CHAF1A-206ENST00000587739 DNMBPQ6XZF7 1577 aa17.03■□□□□ 0.32
CHAF1A-206ENST00000587739 CUX1P39880 1505 aa17.03■□□□□ 0.32
CHAF1A-206ENST00000587739 ABCC8Q09428 1581 aa17.02■□□□□ 0.31
CHAF1A-206ENST00000587739 POLA1P09884 1462 aaPredicted RBP16.96■□□□□ 0.31
CHAF1A-206ENST00000587739 RAD54L2Q9Y4B4 1467 aa16.94■□□□□ 0.3
CHAF1A-206ENST00000587739 WRNQ14191 1432 aaPredicted RBP eCLIP16.94■□□□□ 0.3
CHAF1A-206ENST00000587739 FGD5Q6ZNL6 1462 aa16.93■□□□□ 0.3
CHAF1A-206ENST00000587739 TRIM41Q8WV44 630 aa16.92■□□□□ 0.3
CHAF1A-206ENST00000587739 ZNF608Q9ULD9 1512 aaPredicted RBP16.91■□□□□ 0.3
CHAF1A-206ENST00000587739 SYNJ1O43426 1573 aa16.91■□□□□ 0.3
CHAF1A-206ENST00000587739 SOGA1O94964 1423 aa16.91■□□□□ 0.3
CHAF1A-206ENST00000587739 IFT140Q96RY7 1462 aa16.91■□□□□ 0.3
CHAF1A-206ENST00000587739 TARBP1Q13395 1621 aaKnown RBP16.89■□□□□ 0.29
CHAF1A-206ENST00000587739 TOP2BQ02880 1626 aa16.87■□□□□ 0.29
CHAF1A-206ENST00000587739 AQRO60306 1485 aaKnown RBP eCLIP16.85■□□□□ 0.299e-7■■■□□ 16.5
CHAF1A-206ENST00000587739 BIVM-ERCC5R4GMW8 1640 aa16.85■□□□□ 0.29
CHAF1A-206ENST00000587739 TDRD9Q8NDG6 1382 aaKnown RBP16.84■□□□□ 0.29
CHAF1A-206ENST00000587739 ABCA10Q8WWZ4 1543 aa16.76■□□□□ 0.27
CHAF1A-206ENST00000587739 OSCARQ8IYS5 282 aa16.74■□□□□ 0.27
CHAF1A-206ENST00000587739 EIF4G3O43432 1585 aaKnown RBP16.73■□□□□ 0.27
CHAF1A-206ENST00000587739 WDR97A6NE52 1622 aa16.73■□□□□ 0.27
CHAF1A-206ENST00000587739 GAPVD1Q14C86 1478 aa16.68■□□□□ 0.26
CHAF1A-206ENST00000587739 CHIC1Q5VXU3 224 aa16.67■□□□□ 0.26
CHAF1A-206ENST00000587739 ABCA5Q8WWZ7 1642 aa16.65■□□□□ 0.26
CHAF1A-206ENST00000587739 GRIN2BQ13224 1484 aa16.64■□□□□ 0.25
CHAF1A-206ENST00000587739 RIMBP3CA6NJZ7 1639 aa16.63■□□□□ 0.25
CHAF1A-206ENST00000587739 RIMBP3BA6NNM3 1639 aa16.63■□□□□ 0.25
CHAF1A-206ENST00000587739 RIMBP3Q9UFD9 1639 aa16.63■□□□□ 0.25
CHAF1A-206ENST00000587739 SNAPC4Q5SXM2 1469 aa16.61■□□□□ 0.25
CHAF1A-206ENST00000587739 IGF1RP08069 1367 aa16.6■□□□□ 0.25
CHAF1A-206ENST00000587739 RUSC2Q8N2Y8 1516 aa16.6■□□□□ 0.25
CHAF1A-206ENST00000587739 CHD1O14646 1710 aa16.59■□□□□ 0.25
CHAF1A-206ENST00000587739 FBLN2P98095 1184 aa16.57■□□□□ 0.24
CHAF1A-206ENST00000587739 PBRM1Q86U86 1689 aa16.56■□□□□ 0.24
CHAF1A-206ENST00000587739 MAGI1Q96QZ7 1491 aaPredicted RBP16.55■□□□□ 0.24
CHAF1A-206ENST00000587739 KIF27Q86VH2 1401 aa16.55■□□□□ 0.24
CHAF1A-206ENST00000587739 CHMP7Q8WUX9 453 aaPredicted RBP16.54■□□□□ 0.24
CHAF1A-206ENST00000587739 ERICH3Q5RHP9 1530 aa16.53■□□□□ 0.24
CHAF1A-206ENST00000587739 ARHGEF11O15085 1522 aa16.52■□□□□ 0.24
CHAF1A-206ENST00000587739 SYNJ2O15056 1496 aa16.52■□□□□ 0.23
CHAF1A-206ENST00000587739 FHAD1B1AJZ9 1412 aa16.48■□□□□ 0.23
CHAF1A-206ENST00000587739 ADAMTS12P58397 1594 aa16.47■□□□□ 0.23
CHAF1A-206ENST00000587739 CARMIL1Q5VZK9 1371 aa16.44■□□□□ 0.22
CHAF1A-206ENST00000587739 GRIN2AQ12879 1464 aa16.43■□□□□ 0.22
CHAF1A-206ENST00000587739 CYB5RLQ6IPT4 315 aa16.42■□□□□ 0.22
CHAF1A-206ENST00000587739 NUP160Q12769 1436 aa16.39■□□□□ 0.21
CHAF1A-206ENST00000587739 CSRNP3Q8WYN3 585 aa16.39■□□□□ 0.21
CHAF1A-206ENST00000587739 FAM9AQ8IZU1 332 aaPredicted RBP16.38■□□□□ 0.21
CHAF1A-206ENST00000587739 CLASP1Q7Z460 1538 aa16.37■□□□□ 0.21
CHAF1A-206ENST00000587739 CEP170Q5SW79 1584 aa16.37■□□□□ 0.21
CHAF1A-206ENST00000587739 ARAP1Q96P48 1450 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms