RNA–Protein interactions for RNA: ENST00000586803.1

CALR-203, Transcript of calreticulin, humanhuman

TSL 2

Gene CALR, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-203ENST00000586803 CARMIL1Q5VZK9 1371 aa22.76■■□□□ 1.23
CALR-203ENST00000586803 IQGAP2Q13576 1575 aa22.72■■□□□ 1.23
CALR-203ENST00000586803 PRG4Q92954 1404 aaPredicted RBP22.71■■□□□ 1.23
CALR-203ENST00000586803 CTTNBP2Q8WZ74 1663 aa22.7■■□□□ 1.22
CALR-203ENST00000586803 RAPGEF2Q9Y4G8 1499 aa22.69■■□□□ 1.22
CALR-203ENST00000586803 JPH4Q96JJ6 628 aa22.61■■□□□ 1.21
CALR-203ENST00000586803 PRXQ9BXM0 1461 aa22.56■■□□□ 1.2
CALR-203ENST00000586803 UGGT2Q9NYU1 1516 aa22.54■■□□□ 1.2
CALR-203ENST00000586803 EEA1Q15075 1411 aa22.54■■□□□ 1.2
CALR-203ENST00000586803 ADCY10Q96PN6 1610 aa22.53■■□□□ 1.2
CALR-203ENST00000586803 KIAA0556O60303 1618 aa22.52■■□□□ 1.2
CALR-203ENST00000586803 CARMIL2Q6F5E8 1435 aa22.51■■□□□ 1.19
CALR-203ENST00000586803 DISP1Q96F81 1524 aa22.48■■□□□ 1.19
CALR-203ENST00000586803 MAPKBP1O60336 1514 aa22.44■■□□□ 1.18
CALR-203ENST00000586803 TNIKQ9UKE5 1360 aa22.43■■□□□ 1.18
CALR-203ENST00000586803 KIF13AQ9H1H9 1805 aa22.43■■□□□ 1.18
CALR-203ENST00000586803 TRHP20396 242 aaPredicted RBP22.41■■□□□ 1.18
CALR-203ENST00000586803 KIF21BO75037 1637 aa22.41■■□□□ 1.18
CALR-203ENST00000586803 GOLGA3Q08378 1498 aa22.39■■□□□ 1.17
CALR-203ENST00000586803 PTPRGP23470 1445 aa22.38■■□□□ 1.17
CALR-203ENST00000586803 ABCC2Q92887 1545 aa22.36■■□□□ 1.17
CALR-203ENST00000586803 DIP2BQ9P265 1576 aa22.34■■□□□ 1.17
CALR-203ENST00000586803 UHRF1BP1LA0JNW5 1464 aa22.34■■□□□ 1.17
CALR-203ENST00000586803 CSRNP3Q8WYN3 585 aa22.32■■□□□ 1.16
CALR-203ENST00000586803 SAMD9Q5K651 1589 aa22.32■■□□□ 1.16
CALR-203ENST00000586803 UACAQ9BZF9 1416 aa22.28■■□□□ 1.16
CALR-203ENST00000586803 CHIC1Q5VXU3 224 aa22.27■■□□□ 1.16
CALR-203ENST00000586803 ZCCHC11Q5TAX3 1644 aaKnown RBP22.27■■□□□ 1.16
CALR-203ENST00000586803 ABCC10Q5T3U5 1492 aa22.27■■□□□ 1.16
CALR-203ENST00000586803 NPM1P06748 294 aaKnown RBP eCLIP22.24■■□□□ 1.15
CALR-203ENST00000586803 ABCA8O94911 1581 aa22.23■■□□□ 1.15
CALR-203ENST00000586803 KDM5BQ9UGL1 1544 aa22.22■■□□□ 1.15
CALR-203ENST00000586803 TTBK1Q5TCY1 1321 aaPredicted RBP22.21■■□□□ 1.15
CALR-203ENST00000586803 EFCAB5A4FU69 1503 aa22.18■■□□□ 1.14
CALR-203ENST00000586803 PLB1Q6P1J6 1458 aa22.17■■□□□ 1.14
CALR-203ENST00000586803 FAM9AQ8IZU1 332 aaPredicted RBP22.15■■□□□ 1.14
CALR-203ENST00000586803 ASXL2Q76L83 1435 aa22.14■■□□□ 1.14
CALR-203ENST00000586803 GLI2P10070 1586 aa22.14■■□□□ 1.13
CALR-203ENST00000586803 RAPGEF6Q8TEU7 1601 aa22.13■■□□□ 1.13
CALR-203ENST00000586803 TSPOAP1O95153 1857 aa22.11■■□□□ 1.13
CALR-203ENST00000586803 MAP3K4Q9Y6R4 1608 aa22.08■■□□□ 1.13
CALR-203ENST00000586803 PPRC1Q5VV67 1664 aaKnown RBP22.07■■□□□ 1.12
CALR-203ENST00000586803 WDR7Q9Y4E6 1490 aa22.07■■□□□ 1.12
CALR-203ENST00000586803 FAM69CQ0P6D2 419 aa22.06■■□□□ 1.12
CALR-203ENST00000586803 EPRSP07814 1512 aaKnown RBP22.05■■□□□ 1.12
CALR-203ENST00000586803 FHOD3Q2V2M9 1422 aa22.04■■□□□ 1.12
CALR-203ENST00000586803 KDM6BO15054 1643 aa22.02■■□□□ 1.11
CALR-203ENST00000586803 CFAP43Q8NDM7 1665 aa22.01■■□□□ 1.11
CALR-203ENST00000586803 P3H3Q8IVL6 736 aa21.96■■□□□ 1.11
CALR-203ENST00000586803 NUP153P49790 1475 aaKnown RBP21.95■■□□□ 1.1
CALR-203ENST00000586803 TEX14Q8IWB6 1497 aa21.93■■□□□ 1.1
CALR-203ENST00000586803 HECW1Q76N89 1606 aa21.92■■□□□ 1.1
CALR-203ENST00000586803 ATP10BO94823 1461 aa21.91■■□□□ 1.1
CALR-203ENST00000586803 ARHGAP35Q9NRY4 1499 aa21.91■■□□□ 1.1
CALR-203ENST00000586803 UBTFP17480 764 aaKnown RBP21.9■■□□□ 1.1
CALR-203ENST00000586803 RANGAP1P46060 587 aaPredicted RBP21.9■■□□□ 1.1
CALR-203ENST00000586803 ABCA9Q8IUA7 1624 aa21.89■■□□□ 1.09
CALR-203ENST00000586803 FMN1Q68DA7 1419 aa21.87■■□□□ 1.09
CALR-203ENST00000586803 EHMT2Q96KQ7 1210 aa21.86■■□□□ 1.09
CALR-203ENST00000586803 MAGI3Q5TCQ9 1506 aa21.84■■□□□ 1.09
CALR-203ENST00000586803 PCF11O94913 1555 aaKnown RBP21.8■■□□□ 1.08
CALR-203ENST00000586803 CDK13Q14004 1512 aaKnown RBP21.8■■□□□ 1.08
CALR-203ENST00000586803 ARID3CA6NKF2 412 aa21.79■■□□□ 1.08
CALR-203ENST00000586803 LRRIQ1Q96JM4 1722 aa21.79■■□□□ 1.08
CALR-203ENST00000586803 CD109Q6YHK3 1445 aa21.79■■□□□ 1.08
CALR-203ENST00000586803 CFAP74Q9C0B2 1584 aa21.74■■□□□ 1.07
CALR-203ENST00000586803 TTC37Q6PGP7 1564 aa21.73■■□□□ 1.07
CALR-203ENST00000586803 CLIP1P30622 1438 aa21.71■■□□□ 1.07
CALR-203ENST00000586803 KCNH8Q96L42 1107 aa21.7■■□□□ 1.06
CALR-203ENST00000586803 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.69■■□□□ 1.06
CALR-203ENST00000586803 HNRNPUL2Q1KMD3 747 aaKnown RBP21.69■■□□□ 1.06
CALR-203ENST00000586803 CCDC18Q5T9S5 1454 aa21.69■■□□□ 1.06
CALR-203ENST00000586803 FYCO1Q9BQS8 1478 aa21.69■■□□□ 1.06
CALR-203ENST00000586803 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.69■■□□□ 1.06
CALR-203ENST00000586803 KIF14Q15058 1648 aa21.69■■□□□ 1.06
CALR-203ENST00000586803 COL17A1Q9UMD9 1497 aaPredicted RBP21.67■■□□□ 1.06
CALR-203ENST00000586803 CASKIN1Q8WXD9 1431 aa21.66■■□□□ 1.06
CALR-203ENST00000586803 MYO5CQ9NQX4 1742 aa21.66■■□□□ 1.06
CALR-203ENST00000586803 NEO1Q92859 1461 aa21.65■■□□□ 1.06
CALR-203ENST00000586803 ARAP3Q8WWN8 1544 aa21.65■■□□□ 1.06
CALR-203ENST00000586803 PLEKHD1A6NEE1 506 aa21.61■■□□□ 1.05
CALR-203ENST00000586803 FRMPD1Q5SYB0 1578 aa21.6■■□□□ 1.05
CALR-203ENST00000586803 PHLDB1Q86UU1 1377 aa21.6■■□□□ 1.05
CALR-203ENST00000586803 CEP162Q5TB80 1403 aa21.59■■□□□ 1.05
CALR-203ENST00000586803 TROQ12816 1431 aaPredicted RBP21.58■■□□□ 1.05
CALR-203ENST00000586803 RICTORQ6R327 1708 aa21.57■■□□□ 1.04
CALR-203ENST00000586803 FANCAO15360 1455 aa21.56■■□□□ 1.04
CALR-203ENST00000586803 ATP1B4Q9UN42 357 aaPredicted RBP21.54■■□□□ 1.04
CALR-203ENST00000586803 PREX2Q70Z35 1606 aa21.54■■□□□ 1.04
CALR-203ENST00000586803 CDK11AQ9UQ88 783 aaPredicted RBP21.52■■□□□ 1.04
CALR-203ENST00000586803 ARHGEF40Q8TER5 1519 aa21.51■■□□□ 1.03
CALR-203ENST00000586803 ZMYM4Q5VZL5 1548 aa21.5■■□□□ 1.03
CALR-203ENST00000586803 AKNAQ7Z591 1439 aa21.47■■□□□ 1.03
CALR-203ENST00000586803 CDC42BPAQ5VT25 1732 aa21.47■■□□□ 1.03
CALR-203ENST00000586803 CDC42BPBQ9Y5S2 1711 aa21.47■■□□□ 1.03
CALR-203ENST00000586803 PLCH2O75038 1416 aa21.46■■□□□ 1.03
CALR-203ENST00000586803 ADGRL1O94910 1474 aa21.46■■□□□ 1.03
CALR-203ENST00000586803 DENND4BO75064 1496 aaPredicted RBP21.45■■□□□ 1.03
CALR-203ENST00000586803 ARHGAP5Q13017 1502 aa21.45■■□□□ 1.02
CALR-203ENST00000586803 EHBP1L1Q8N3D4 1523 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms