RNA–Protein interactions for RNA: ENST00000586803.1

CALR-203, Transcript of calreticulin, humanhuman

TSL 2

Gene CALR, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-203ENST00000586803 NISCHQ9Y2I1 1504 aa32.87■■■□□ 2.85
CALR-203ENST00000586803 CCDC180Q9P1Z9 1646 aa29.52■■■□□ 2.32
CALR-203ENST00000586803 ABCC9O60706 1549 aa28.77■■■□□ 2.2
CALR-203ENST00000586803 RB1CC1Q8TDY2 1594 aa27.75■■■□□ 2.03
CALR-203ENST00000586803 NACADO15069 1562 aa27.65■■■□□ 2.02
CALR-203ENST00000586803 MYO15BQ96JP2 1530 aa27.46■■□□□ 1.99
CALR-203ENST00000586803 ZCCHC6Q5VYS8 1495 aaKnown RBP27.43■■□□□ 1.98
CALR-203ENST00000586803 DCAF1Q9Y4B6 1507 aa27.27■■□□□ 1.96
CALR-203ENST00000586803 UNC13AQ9UPW8 1703 aa27.21■■□□□ 1.95
CALR-203ENST00000586803 DCAF8L2P0C7V8 631 aa27.21■■□□□ 1.95
CALR-203ENST00000586803 BICRAQ9NZM4 1560 aa26.88■■□□□ 1.89
CALR-203ENST00000586803 SCRIBQ14160 1630 aa26.79■■□□□ 1.88
CALR-203ENST00000586803 SHROOM4Q9ULL8 1493 aa26.71■■□□□ 1.87
CALR-203ENST00000586803 PABPN1Q86U42 306 aaKnown RBP eCLIP26.68■■□□□ 1.86
CALR-203ENST00000586803 DNAJC5BQ9UF47 199 aa26.33■■□□□ 1.81
CALR-203ENST00000586803 EIF4G1Q04637 1599 aaKnown RBP26.2■■□□□ 1.78
CALR-203ENST00000586803 CC2D2AQ9P2K1 1620 aa26.11■■□□□ 1.77
CALR-203ENST00000586803 CECR2Q9BXF3 1484 aa25.9■■□□□ 1.74
CALR-203ENST00000586803 SMARCA4P51532 1647 aa25.63■■□□□ 1.69
CALR-203ENST00000586803 BAZ1AQ9NRL2 1556 aaPredicted RBP25.56■■□□□ 1.68
CALR-203ENST00000586803 SMARCA2P51531 1590 aa25.48■■□□□ 1.67
CALR-203ENST00000586803 HMGXB3Q12766 1538 aa25.43■■□□□ 1.66
CALR-203ENST00000586803 NCAPD3P42695 1498 aa25.41■■□□□ 1.66
CALR-203ENST00000586803 ATAD2BQ9ULI0 1458 aa25.41■■□□□ 1.66
CALR-203ENST00000586803 PEG3Q9GZU2 1588 aa25.4■■□□□ 1.66
CALR-203ENST00000586803 MROH2BQ7Z745 1585 aa25.31■■□□□ 1.64
CALR-203ENST00000586803 BAZ1BQ9UIG0 1483 aaKnown RBP25.25■■□□□ 1.63
CALR-203ENST00000586803 WIZO95785 1651 aa25.08■■□□□ 1.61
CALR-203ENST00000586803 LAMC3Q9Y6N6 1575 aa24.9■■□□□ 1.58
CALR-203ENST00000586803 RSF1Q96T23 1441 aaPredicted RBP24.9■■□□□ 1.58
CALR-203ENST00000586803 TOP2AP11388 1531 aaKnown RBP24.86■■□□□ 1.57
CALR-203ENST00000586803 ERCC6Q03468 1493 aa24.86■■□□□ 1.57
CALR-203ENST00000586803 NESP48681 1621 aa24.85■■□□□ 1.57
CALR-203ENST00000586803 KIF21AQ7Z4S6 1674 aa24.73■■□□□ 1.55
CALR-203ENST00000586803 CUX2O14529 1486 aa24.72■■□□□ 1.55
CALR-203ENST00000586803 THOC2Q8NI27 1593 aaKnown RBP24.7■■□□□ 1.54
CALR-203ENST00000586803 CADPSQ9ULU8 1353 aa24.62■■□□□ 1.53
CALR-203ENST00000586803 PDS5BQ9NTI5 1447 aa24.61■■□□□ 1.53
CALR-203ENST00000586803 PRDM2Q13029 1718 aa24.6■■□□□ 1.53
CALR-203ENST00000586803 CFTRP13569 1480 aa24.51■■□□□ 1.51
CALR-203ENST00000586803 CEP164Q9UPV0 1460 aa24.45■■□□□ 1.51
CALR-203ENST00000586803 MRC2Q9UBG0 1479 aa24.45■■□□□ 1.5
CALR-203ENST00000586803 WDR62O43379 1518 aa24.42■■□□□ 1.5
CALR-203ENST00000586803 CCDC88BA6NC98 1476 aa24.41■■□□□ 1.5
CALR-203ENST00000586803 FANCD2Q9BXW9 1451 aa24.41■■□□□ 1.5
CALR-203ENST00000586803 URB2Q14146 1524 aaKnown RBP24.19■■□□□ 1.46
CALR-203ENST00000586803 DNMBPQ6XZF7 1577 aa24.06■■□□□ 1.44
CALR-203ENST00000586803 TOPBP1Q92547 1522 aa24.03■■□□□ 1.44
CALR-203ENST00000586803 ABCC8Q09428 1581 aa24.02■■□□□ 1.44
CALR-203ENST00000586803 SUPT5HO00267 1087 aaKnown RBP23.97■■□□□ 1.43
CALR-203ENST00000586803 IFT140Q96RY7 1462 aa23.93■■□□□ 1.42
CALR-203ENST00000586803 DNAJC5Q9H3Z4 198 aa23.89■■□□□ 1.41
CALR-203ENST00000586803 EIF4G3O43432 1585 aaKnown RBP23.85■■□□□ 1.41
CALR-203ENST00000586803 TARBP1Q13395 1621 aaKnown RBP23.83■■□□□ 1.41
CALR-203ENST00000586803 POLA1P09884 1462 aaPredicted RBP23.81■■□□□ 1.4
CALR-203ENST00000586803 CUX1P39880 1505 aa23.78■■□□□ 1.4
CALR-203ENST00000586803 ZNF608Q9ULD9 1512 aaPredicted RBP23.77■■□□□ 1.4
CALR-203ENST00000586803 WDR97A6NE52 1622 aa23.75■■□□□ 1.39
CALR-203ENST00000586803 FGD5Q6ZNL6 1462 aa23.73■■□□□ 1.39
CALR-203ENST00000586803 BIVM-ERCC5R4GMW8 1640 aa23.66■■□□□ 1.38
CALR-203ENST00000586803 RAD54L2Q9Y4B4 1467 aa23.62■■□□□ 1.37
CALR-203ENST00000586803 TOP2BQ02880 1626 aa23.6■■□□□ 1.37
CALR-203ENST00000586803 SOGA1O94964 1423 aa23.59■■□□□ 1.37
CALR-203ENST00000586803 CHD1O14646 1710 aa23.59■■□□□ 1.37
CALR-203ENST00000586803 PBRM1Q86U86 1689 aa23.57■■□□□ 1.36
CALR-203ENST00000586803 SYNJ1O43426 1573 aa23.57■■□□□ 1.36
CALR-203ENST00000586803 AQRO60306 1485 aaKnown RBP eCLIP23.56■■□□□ 1.362e-12■■■□□ 14.8
CALR-203ENST00000586803 WRNQ14191 1432 aaPredicted RBP eCLIP23.53■■□□□ 1.36
CALR-203ENST00000586803 ABCA5Q8WWZ7 1642 aa23.53■■□□□ 1.36
CALR-203ENST00000586803 ABCA10Q8WWZ4 1543 aa23.5■■□□□ 1.35
CALR-203ENST00000586803 SNAPC4Q5SXM2 1469 aa23.46■■□□□ 1.35
CALR-203ENST00000586803 MAGI1Q96QZ7 1491 aaPredicted RBP23.45■■□□□ 1.34
CALR-203ENST00000586803 TDRD9Q8NDG6 1382 aaKnown RBP23.45■■□□□ 1.34
CALR-203ENST00000586803 GRIN2BQ13224 1484 aa23.44■■□□□ 1.34
CALR-203ENST00000586803 OSCARQ8IYS5 282 aa23.41■■□□□ 1.34
CALR-203ENST00000586803 GAPVD1Q14C86 1478 aa23.39■■□□□ 1.34
CALR-203ENST00000586803 SYNJ2O15056 1496 aa23.33■■□□□ 1.33
CALR-203ENST00000586803 ADAMTS12P58397 1594 aa23.32■■□□□ 1.32
CALR-203ENST00000586803 RIMBP3CA6NJZ7 1639 aa23.32■■□□□ 1.32
CALR-203ENST00000586803 RIMBP3BA6NNM3 1639 aa23.32■■□□□ 1.32
CALR-203ENST00000586803 RIMBP3Q9UFD9 1639 aa23.32■■□□□ 1.32
CALR-203ENST00000586803 CLASP1Q7Z460 1538 aa23.28■■□□□ 1.32
CALR-203ENST00000586803 ARHGEF11O15085 1522 aa23.26■■□□□ 1.31
CALR-203ENST00000586803 ERICH3Q5RHP9 1530 aa23.26■■□□□ 1.31
CALR-203ENST00000586803 FBLN2P98095 1184 aa23.2■■□□□ 1.3
CALR-203ENST00000586803 GRIN2AQ12879 1464 aa23.17■■□□□ 1.3
CALR-203ENST00000586803 CHMP7Q8WUX9 453 aaPredicted RBP23.15■■□□□ 1.3
CALR-203ENST00000586803 FHAD1B1AJZ9 1412 aa23.13■■□□□ 1.29
CALR-203ENST00000586803 CUL7Q14999 1698 aa23.1■■□□□ 1.29
CALR-203ENST00000586803 CEP170Q5SW79 1584 aa23.1■■□□□ 1.29
CALR-203ENST00000586803 NUP160Q12769 1436 aa23.05■■□□□ 1.28
CALR-203ENST00000586803 ARAP1Q96P48 1450 aa23.05■■□□□ 1.28
CALR-203ENST00000586803 TRIM41Q8WV44 630 aa23.04■■□□□ 1.28
CALR-203ENST00000586803 KIF27Q86VH2 1401 aa23.04■■□□□ 1.28
CALR-203ENST00000586803 SHROOM2Q13796 1616 aa23■■□□□ 1.27
CALR-203ENST00000586803 RUSC2Q8N2Y8 1516 aa23■■□□□ 1.27
CALR-203ENST00000586803 ERCC6L2Q5T890 1561 aa22.85■■□□□ 1.25
CALR-203ENST00000586803 IGF1RP08069 1367 aa22.85■■□□□ 1.25
CALR-203ENST00000586803 CYB5RLQ6IPT4 315 aa22.8■■□□□ 1.24
CALR-203ENST00000586803 KIAA0586Q9BVV6 1533 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms