RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 RAPGEF2Q9Y4G8 1499 aa16.42■□□□□ 0.22
APOC1-201ENST00000586638 ERCC6L2Q5T890 1561 aa16.42■□□□□ 0.22
APOC1-201ENST00000586638 ERICH3Q5RHP9 1530 aa16.41■□□□□ 0.22
APOC1-201ENST00000586638 FHAD1B1AJZ9 1412 aa16.41■□□□□ 0.22
APOC1-201ENST00000586638 NUP160Q12769 1436 aa16.41■□□□□ 0.22
APOC1-201ENST00000586638 PRXQ9BXM0 1461 aa16.41■□□□□ 0.22
APOC1-201ENST00000586638 JPH4Q96JJ6 628 aa16.38■□□□□ 0.21
APOC1-201ENST00000586638 CEP170Q5SW79 1584 aa16.38■□□□□ 0.21
APOC1-201ENST00000586638 TNIKQ9UKE5 1360 aa16.37■□□□□ 0.21
APOC1-201ENST00000586638 CUL7Q14999 1698 aa16.35■□□□□ 0.21
APOC1-201ENST00000586638 ILDR1Q86SU0 546 aaPredicted RBP16.35■□□□□ 0.21
APOC1-201ENST00000586638 ADAMTS12P58397 1594 aa16.34■□□□□ 0.21
APOC1-201ENST00000586638 CEP162Q5TB80 1403 aa16.34■□□□□ 0.21
APOC1-201ENST00000586638 PRG4Q92954 1404 aaPredicted RBP16.34■□□□□ 0.21
APOC1-201ENST00000586638 NPM1P06748 294 aaKnown RBP eCLIP16.33■□□□□ 0.2
APOC1-201ENST00000586638 IGF1RP08069 1367 aa16.33■□□□□ 0.2
APOC1-201ENST00000586638 UBTFP17480 764 aaKnown RBP16.32■□□□□ 0.2
APOC1-201ENST00000586638 FAM69CQ0P6D2 419 aa16.29■□□□□ 0.2
APOC1-201ENST00000586638 SHROOM2Q13796 1616 aa16.29■□□□□ 0.2
APOC1-201ENST00000586638 CARMIL1Q5VZK9 1371 aa16.26■□□□□ 0.19
APOC1-201ENST00000586638 CTTNBP2Q8WZ74 1663 aa16.22■□□□□ 0.19
APOC1-201ENST00000586638 CLIP1P30622 1438 aa16.2■□□□□ 0.18
APOC1-201ENST00000586638 ABCC10Q5T3U5 1492 aa16.18■□□□□ 0.18
APOC1-201ENST00000586638 KIF13AQ9H1H9 1805 aa16.15■□□□□ 0.18
APOC1-201ENST00000586638 KIAA0586Q9BVV6 1533 aa16.13■□□□□ 0.17
APOC1-201ENST00000586638 RANGAP1P46060 587 aaPredicted RBP16.12■□□□□ 0.17
APOC1-201ENST00000586638 TTBK1Q5TCY1 1321 aaPredicted RBP16.11■□□□□ 0.17
APOC1-201ENST00000586638 MAPKBP1O60336 1514 aa16.1■□□□□ 0.17
APOC1-201ENST00000586638 PTPRGP23470 1445 aa16.09■□□□□ 0.17
APOC1-201ENST00000586638 KDM4FA0A1W2PPD8 638 aa16.08■□□□□ 0.16
APOC1-201ENST00000586638 ARHGAP35Q9NRY4 1499 aa16.07■□□□□ 0.16
APOC1-201ENST00000586638 ADCY10Q96PN6 1610 aa16.06■□□□□ 0.16
APOC1-201ENST00000586638 VPS8Q8N3P4 1428 aa16.05■□□□□ 0.16
APOC1-201ENST00000586638 DIP2BQ9P265 1576 aa16.04■□□□□ 0.16
APOC1-201ENST00000586638 CARMIL2Q6F5E8 1435 aa16.02■□□□□ 0.15
APOC1-201ENST00000586638 EFCAB5A4FU69 1503 aa16.01■□□□□ 0.15
APOC1-201ENST00000586638 IQGAP2Q13576 1575 aa16■□□□□ 0.15
APOC1-201ENST00000586638 KDM6BO15054 1643 aa15.99■□□□□ 0.15
APOC1-201ENST00000586638 SAMD9Q5K651 1589 aa15.99■□□□□ 0.15
APOC1-201ENST00000586638 PPARGC1BQ86YN6 1023 aaKnown RBP15.95■□□□□ 0.14
APOC1-201ENST00000586638 PLB1Q6P1J6 1458 aa15.95■□□□□ 0.14
APOC1-201ENST00000586638 FHOD3Q2V2M9 1422 aa15.94■□□□□ 0.14
APOC1-201ENST00000586638 ASXL2Q76L83 1435 aa15.94■□□□□ 0.14
APOC1-201ENST00000586638 ABCC2Q92887 1545 aa15.94■□□□□ 0.14
APOC1-201ENST00000586638 PCF11O94913 1555 aaKnown RBP15.94■□□□□ 0.14
APOC1-201ENST00000586638 TSPOAP1O95153 1857 aa15.94■□□□□ 0.14
APOC1-201ENST00000586638 UACAQ9BZF9 1416 aa15.92■□□□□ 0.14
APOC1-201ENST00000586638 UHRF1BP1LA0JNW5 1464 aa15.89■□□□□ 0.13
APOC1-201ENST00000586638 UGGT2Q9NYU1 1516 aa15.89■□□□□ 0.13
APOC1-201ENST00000586638 P3H3Q8IVL6 736 aa15.88■□□□□ 0.13
APOC1-201ENST00000586638 CFAP43Q8NDM7 1665 aa15.87■□□□□ 0.13
APOC1-201ENST00000586638 GLI2P10070 1586 aa15.87■□□□□ 0.13
APOC1-201ENST00000586638 KIAA0556O60303 1618 aa15.86■□□□□ 0.13
APOC1-201ENST00000586638 PCGF6Q9BYE7 350 aa15.86■□□□□ 0.13
APOC1-201ENST00000586638 DISP1Q96F81 1524 aa15.85■□□□□ 0.13
APOC1-201ENST00000586638 TRIM26Q12899 539 aaPredicted RBP15.83■□□□□ 0.12
APOC1-201ENST00000586638 EPRSP07814 1512 aaKnown RBP15.83■□□□□ 0.12
APOC1-201ENST00000586638 FYCO1Q9BQS8 1478 aa15.82■□□□□ 0.12
APOC1-201ENST00000586638 COL17A1Q9UMD9 1497 aaPredicted RBP15.82■□□□□ 0.12
APOC1-201ENST00000586638 KDM5BQ9UGL1 1544 aa15.82■□□□□ 0.12
APOC1-201ENST00000586638 TIAM1Q13009 1591 aa15.82■□□□□ 0.12
APOC1-201ENST00000586638 LRRIQ1Q96JM4 1722 aa15.82■□□□□ 0.12
APOC1-201ENST00000586638 FMN1Q68DA7 1419 aa15.8■□□□□ 0.12
APOC1-201ENST00000586638 ADGRL1O94910 1474 aa15.79■□□□□ 0.12
APOC1-201ENST00000586638 TEX14Q8IWB6 1497 aa15.78■□□□□ 0.12
APOC1-201ENST00000586638 CASKIN1Q8WXD9 1431 aa15.78■□□□□ 0.12
APOC1-201ENST00000586638 APLP2Q06481 763 aa15.78■□□□□ 0.12
APOC1-201ENST00000586638 KCNH8Q96L42 1107 aa15.78■□□□□ 0.12
APOC1-201ENST00000586638 PPRC1Q5VV67 1664 aaKnown RBP15.77■□□□□ 0.12
APOC1-201ENST00000586638 HECW1Q76N89 1606 aa15.76■□□□□ 0.11
APOC1-201ENST00000586638 MAP3K1Q13233 1512 aa15.75■□□□□ 0.11
APOC1-201ENST00000586638 MAP3K4Q9Y6R4 1608 aa15.72■□□□□ 0.11
APOC1-201ENST00000586638 ZCCHC11Q5TAX3 1644 aaKnown RBP15.72■□□□□ 0.11
APOC1-201ENST00000586638 WDR7Q9Y4E6 1490 aa15.71■□□□□ 0.11
APOC1-201ENST00000586638 CD109Q6YHK3 1445 aa15.71■□□□□ 0.11
APOC1-201ENST00000586638 KANK4Q5T7N3 995 aaPredicted RBP15.71■□□□□ 0.11
APOC1-201ENST00000586638 RAPGEF6Q8TEU7 1601 aa15.7■□□□□ 0.1
APOC1-201ENST00000586638 ATP1B4Q9UN42 357 aaPredicted RBP15.69■□□□□ 0.1
APOC1-201ENST00000586638 LRRC9Q6ZRR7 1453 aa15.69■□□□□ 0.1
APOC1-201ENST00000586638 HECW2Q9P2P5 1572 aa15.69■□□□□ 0.1
APOC1-201ENST00000586638 FBXO41Q8TF61 875 aa15.67■□□□□ 0.1
APOC1-201ENST00000586638 MAGI3Q5TCQ9 1506 aa15.66■□□□□ 0.1
APOC1-201ENST00000586638 CCDC18Q5T9S5 1454 aa15.65■□□□□ 0.1
APOC1-201ENST00000586638 CDK13Q14004 1512 aaKnown RBP15.65■□□□□ 0.1
APOC1-201ENST00000586638 ARID3CA6NKF2 412 aa15.64■□□□□ 0.09
APOC1-201ENST00000586638 EHBP1L1Q8N3D4 1523 aa15.63■□□□□ 0.09
APOC1-201ENST00000586638 NUP153P49790 1475 aaKnown RBP15.61■□□□□ 0.09
APOC1-201ENST00000586638 ABCA8O94911 1581 aa15.61■□□□□ 0.09
APOC1-201ENST00000586638 SUPT6HQ7KZ85 1726 aaKnown RBP15.59■□□□□ 0.09
APOC1-201ENST00000586638 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.56■□□□□ 0.08
APOC1-201ENST00000586638 HNRNPUL2Q1KMD3 747 aaKnown RBP15.56■□□□□ 0.08
APOC1-201ENST00000586638 MTUS2Q5JR59 1369 aa15.56■□□□□ 0.08
APOC1-201ENST00000586638 ATP10BO94823 1461 aa15.56■□□□□ 0.08
APOC1-201ENST00000586638 RRBP1Q9P2E9 1410 aaKnown RBP15.55■□□□□ 0.08
APOC1-201ENST00000586638 PHLDB1Q86UU1 1377 aa15.55■□□□□ 0.08
APOC1-201ENST00000586638 ARAP3Q8WWN8 1544 aa15.54■□□□□ 0.08
APOC1-201ENST00000586638 RAPGEF3O95398 923 aa15.54■□□□□ 0.08
APOC1-201ENST00000586638 NCOA2Q15596 1464 aa15.52■□□□□ 0.07
APOC1-201ENST00000586638 LMTK3Q96Q04 1460 aa15.52■□□□□ 0.07
APOC1-201ENST00000586638 ARID4BQ4LE39 1312 aaPredicted RBP15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms