RNA–Protein interactions for RNA: ENST00000586271.1

TMC6-206, Transcript of transmembrane channel like 6, humanhuman

TSL 2

Gene TMC6, Length 970 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-206ENST00000586271 FAM9AQ8IZU1 332 aaPredicted RBP31.17■■■□□ 2.58
TMC6-206ENST00000586271 IGF1RP08069 1367 aa31.17■■■□□ 2.58
TMC6-206ENST00000586271 SHROOM2Q13796 1616 aa31.14■■■□□ 2.58
TMC6-206ENST00000586271 CUL7Q14999 1698 aa31.13■■■□□ 2.57
TMC6-206ENST00000586271 JPH4Q96JJ6 628 aa31.05■■■□□ 2.56
TMC6-206ENST00000586271 CARMIL1Q5VZK9 1371 aa31.04■■■□□ 2.56
TMC6-206ENST00000586271 PRG4Q92954 1404 aaPredicted RBP31.02■■■□□ 2.56
TMC6-206ENST00000586271 PRXQ9BXM0 1461 aa31.01■■■□□ 2.56
TMC6-206ENST00000586271 KIF21BO75037 1637 aa31■■■□□ 2.55
TMC6-206ENST00000586271 RAPGEF2Q9Y4G8 1499 aa30.95■■■□□ 2.55
TMC6-206ENST00000586271 GOLGA3Q08378 1498 aa30.89■■■□□ 2.54
TMC6-206ENST00000586271 KIAA0586Q9BVV6 1533 aa30.83■■■□□ 2.53
TMC6-206ENST00000586271 UBTFP17480 764 aaKnown RBP30.72■■■□□ 2.51
TMC6-206ENST00000586271 NPM1P06748 294 aaKnown RBP eCLIP30.71■■■□□ 2.51
TMC6-206ENST00000586271 KIF13AQ9H1H9 1805 aa30.66■■■□□ 2.5
TMC6-206ENST00000586271 TNIKQ9UKE5 1360 aa30.65■■■□□ 2.5
TMC6-206ENST00000586271 LOC105371045A0A1W2PR82 267 aa30.64■■■□□ 2.5
TMC6-206ENST00000586271 AEBP2Q6ZN18 517 aaPredicted RBP30.64■■■□□ 2.5
TMC6-206ENST00000586271 ABCC10Q5T3U5 1492 aa30.63■■■□□ 2.49
TMC6-206ENST00000586271 MAPKBP1O60336 1514 aa30.63■■■□□ 2.49
TMC6-206ENST00000586271 EHMT2Q96KQ7 1210 aa30.63■■■□□ 2.49
TMC6-206ENST00000586271 FAM69CQ0P6D2 419 aa30.62■■■□□ 2.49
TMC6-206ENST00000586271 ADCY10Q96PN6 1610 aa30.62■■■□□ 2.49
TMC6-206ENST00000586271 CTTNBP2Q8WZ74 1663 aa30.62■■■□□ 2.49
TMC6-206ENST00000586271 PTPRGP23470 1445 aa30.55■■■□□ 2.48
TMC6-206ENST00000586271 CARMIL2Q6F5E8 1435 aa30.51■■■□□ 2.47
TMC6-206ENST00000586271 IQGAP2Q13576 1575 aa30.5■■■□□ 2.47
TMC6-206ENST00000586271 DIP2BQ9P265 1576 aa30.49■■■□□ 2.47
TMC6-206ENST00000586271 TTBK1Q5TCY1 1321 aaPredicted RBP30.39■■■□□ 2.46
TMC6-206ENST00000586271 ABCC2Q92887 1545 aa30.37■■■□□ 2.45
TMC6-206ENST00000586271 CEP162Q5TB80 1403 aa30.37■■■□□ 2.45
TMC6-206ENST00000586271 UGGT2Q9NYU1 1516 aa30.37■■■□□ 2.45
TMC6-206ENST00000586271 DISP1Q96F81 1524 aa30.35■■■□□ 2.45
TMC6-206ENST00000586271 EFCAB5A4FU69 1503 aa30.34■■■□□ 2.45
TMC6-206ENST00000586271 UHRF1BP1LA0JNW5 1464 aa30.34■■■□□ 2.45
TMC6-206ENST00000586271 CLIP1P30622 1438 aa30.33■■■□□ 2.45
TMC6-206ENST00000586271 UACAQ9BZF9 1416 aa30.3■■■□□ 2.44
TMC6-206ENST00000586271 PLB1Q6P1J6 1458 aa30.28■■■□□ 2.44
TMC6-206ENST00000586271 ASXL2Q76L83 1435 aa30.27■■■□□ 2.44
TMC6-206ENST00000586271 SAMD9Q5K651 1589 aa30.24■■■□□ 2.43
TMC6-206ENST00000586271 RANGAP1P46060 587 aaPredicted RBP30.24■■■□□ 2.43
TMC6-206ENST00000586271 KDM6BO15054 1643 aa30.22■■■□□ 2.43
TMC6-206ENST00000586271 ARHGAP35Q9NRY4 1499 aa30.2■■■□□ 2.43
TMC6-206ENST00000586271 GLI2P10070 1586 aa30.2■■■□□ 2.42
TMC6-206ENST00000586271 TSPOAP1O95153 1857 aa30.19■■■□□ 2.42
TMC6-206ENST00000586271 KDM5BQ9UGL1 1544 aa30.18■■■□□ 2.42
TMC6-206ENST00000586271 KIAA0556O60303 1618 aa30.18■■■□□ 2.42
TMC6-206ENST00000586271 EPRSP07814 1512 aaKnown RBP30.09■■■□□ 2.41
TMC6-206ENST00000586271 FMN1Q68DA7 1419 aa30.06■■■□□ 2.4
TMC6-206ENST00000586271 FHOD3Q2V2M9 1422 aa30.05■■■□□ 2.4
TMC6-206ENST00000586271 PPRC1Q5VV67 1664 aaKnown RBP30.05■■■□□ 2.4
TMC6-206ENST00000586271 KDM4FA0A1W2PPD8 638 aa30.05■■■□□ 2.4
TMC6-206ENST00000586271 P3H3Q8IVL6 736 aa30.05■■■□□ 2.4
TMC6-206ENST00000586271 ZCCHC11Q5TAX3 1644 aaKnown RBP30.04■■■□□ 2.4
TMC6-206ENST00000586271 VPS8Q8N3P4 1428 aa29.98■■■□□ 2.39
TMC6-206ENST00000586271 MAP3K4Q9Y6R4 1608 aa29.97■■■□□ 2.39
TMC6-206ENST00000586271 WDR7Q9Y4E6 1490 aa29.96■■■□□ 2.39
TMC6-206ENST00000586271 TEX14Q8IWB6 1497 aa29.94■■■□□ 2.38
TMC6-206ENST00000586271 COL17A1Q9UMD9 1497 aaPredicted RBP29.93■■■□□ 2.38
TMC6-206ENST00000586271 ABCA8O94911 1581 aa29.93■■■□□ 2.38
TMC6-206ENST00000586271 CASKIN1Q8WXD9 1431 aa29.86■■■□□ 2.37
TMC6-206ENST00000586271 FYCO1Q9BQS8 1478 aa29.85■■■□□ 2.37
TMC6-206ENST00000586271 RAPGEF6Q8TEU7 1601 aa29.82■■■□□ 2.36
TMC6-206ENST00000586271 KCNH8Q96L42 1107 aa29.81■■■□□ 2.36
TMC6-206ENST00000586271 CD109Q6YHK3 1445 aa29.8■■■□□ 2.36
TMC6-206ENST00000586271 MAGI3Q5TCQ9 1506 aa29.8■■■□□ 2.36
TMC6-206ENST00000586271 HECW1Q76N89 1606 aa29.79■■■□□ 2.36
TMC6-206ENST00000586271 PCF11O94913 1555 aaKnown RBP29.79■■■□□ 2.36
TMC6-206ENST00000586271 APLP2Q06481 763 aa29.75■■■□□ 2.35
TMC6-206ENST00000586271 CFAP43Q8NDM7 1665 aa29.73■■■□□ 2.35
TMC6-206ENST00000586271 ADGRL1O94910 1474 aa29.73■■■□□ 2.35
TMC6-206ENST00000586271 ATP10BO94823 1461 aa29.72■■■□□ 2.35
TMC6-206ENST00000586271 CCDC18Q5T9S5 1454 aa29.72■■■□□ 2.35
TMC6-206ENST00000586271 ATP1B4Q9UN42 357 aaPredicted RBP29.71■■■□□ 2.35
TMC6-206ENST00000586271 MAP3K1Q13233 1512 aa29.67■■■□□ 2.34
TMC6-206ENST00000586271 NUP153P49790 1475 aaKnown RBP29.67■■■□□ 2.34
TMC6-206ENST00000586271 ARID3CA6NKF2 412 aa29.65■■■□□ 2.34
TMC6-206ENST00000586271 CDK11AQ9UQ88 783 aaPredicted RBP29.58■■■□□ 2.33
TMC6-206ENST00000586271 TIAM1Q13009 1591 aa29.57■■■□□ 2.32
TMC6-206ENST00000586271 ARAP3Q8WWN8 1544 aa29.56■■■□□ 2.32
TMC6-206ENST00000586271 PHLDB1Q86UU1 1377 aa29.55■■■□□ 2.32
TMC6-206ENST00000586271 LRRIQ1Q96JM4 1722 aa29.54■■■□□ 2.32
TMC6-206ENST00000586271 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.53■■■□□ 2.32
TMC6-206ENST00000586271 HNRNPUL2Q1KMD3 747 aaKnown RBP29.53■■■□□ 2.32
TMC6-206ENST00000586271 ABCA9Q8IUA7 1624 aa29.53■■■□□ 2.32
TMC6-206ENST00000586271 CDK13Q14004 1512 aaKnown RBP29.5■■■□□ 2.31
TMC6-206ENST00000586271 MTUS2Q5JR59 1369 aa29.44■■■□□ 2.3
TMC6-206ENST00000586271 PLEKHD1A6NEE1 506 aa29.44■■■□□ 2.3
TMC6-206ENST00000586271 LRRC9Q6ZRR7 1453 aa29.43■■■□□ 2.3
TMC6-206ENST00000586271 NEO1Q92859 1461 aa29.43■■■□□ 2.3
TMC6-206ENST00000586271 EHBP1L1Q8N3D4 1523 aa29.42■■■□□ 2.3
TMC6-206ENST00000586271 TROQ12816 1431 aaPredicted RBP29.38■■■□□ 2.29
TMC6-206ENST00000586271 RAPGEF3O95398 923 aa29.38■■■□□ 2.29
TMC6-206ENST00000586271 KANK4Q5T7N3 995 aaPredicted RBP29.33■■■□□ 2.29
TMC6-206ENST00000586271 HECW2Q9P2P5 1572 aa29.31■■■□□ 2.28
TMC6-206ENST00000586271 SUPT6HQ7KZ85 1726 aaKnown RBP29.31■■■□□ 2.28
TMC6-206ENST00000586271 KIF14Q15058 1648 aa29.27■■■□□ 2.28
TMC6-206ENST00000586271 FRMPD1Q5SYB0 1578 aa29.24■■■□□ 2.27
TMC6-206ENST00000586271 AKNAQ7Z591 1439 aa29.22■■■□□ 2.27
TMC6-206ENST00000586271 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.22■■■□□ 2.271e-6■■□□□ 11.5
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms