RNA–Protein interactions for RNA: ENST00000585741.1

HMG20B-215, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-215ENST00000585741 RUSC2Q8N2Y8 1516 aa27.82■■■□□ 2.04
HMG20B-215ENST00000585741 CSRNP3Q8WYN3 585 aa27.78■■■□□ 2.04
HMG20B-215ENST00000585741 IGF1RP08069 1367 aa27.7■■■□□ 2.02
HMG20B-215ENST00000585741 PRG4Q92954 1404 aaPredicted RBP27.69■■■□□ 2.02
HMG20B-215ENST00000585741 JPH4Q96JJ6 628 aa27.67■■■□□ 2.02
HMG20B-215ENST00000585741 CARMIL1Q5VZK9 1371 aa27.61■■■□□ 2.01
HMG20B-215ENST00000585741 CUL7Q14999 1698 aa27.59■■■□□ 2.01
HMG20B-215ENST00000585741 EHMT2Q96KQ7 1210 aa27.56■■■□□ 2
HMG20B-215ENST00000585741 KIF13AQ9H1H9 1805 aa27.55■■■□□ 2
HMG20B-215ENST00000585741 RAPGEF2Q9Y4G8 1499 aa27.51■■■□□ 2
HMG20B-215ENST00000585741 PRXQ9BXM0 1461 aa27.51■■□□□ 1.99
HMG20B-215ENST00000585741 KIAA0586Q9BVV6 1533 aa27.47■■□□□ 1.99
HMG20B-215ENST00000585741 AEBP2Q6ZN18 517 aaPredicted RBP27.47■■□□□ 1.99
HMG20B-215ENST00000585741 KIF21BO75037 1637 aa27.47■■□□□ 1.99
HMG20B-215ENST00000585741 GOLGA3Q08378 1498 aa27.44■■□□□ 1.98
HMG20B-215ENST00000585741 UBTFP17480 764 aaKnown RBP27.44■■□□□ 1.98
HMG20B-215ENST00000585741 ADCY10Q96PN6 1610 aa27.42■■□□□ 1.98
HMG20B-215ENST00000585741 ABCC10Q5T3U5 1492 aa27.42■■□□□ 1.98
HMG20B-215ENST00000585741 MAPKBP1O60336 1514 aa27.41■■□□□ 1.98
HMG20B-215ENST00000585741 LOC105371045A0A1W2PR82 267 aa27.37■■□□□ 1.97
HMG20B-215ENST00000585741 FAM69CQ0P6D2 419 aa27.36■■□□□ 1.97
HMG20B-215ENST00000585741 DIP2BQ9P265 1576 aa27.34■■□□□ 1.97
HMG20B-215ENST00000585741 NPM1P06748 294 aaKnown RBP eCLIP27.32■■□□□ 1.96
HMG20B-215ENST00000585741 PTPRGP23470 1445 aa27.23■■□□□ 1.95
HMG20B-215ENST00000585741 TNIKQ9UKE5 1360 aa27.21■■□□□ 1.95
HMG20B-215ENST00000585741 RANGAP1P46060 587 aaPredicted RBP27.16■■□□□ 1.94
HMG20B-215ENST00000585741 CTTNBP2Q8WZ74 1663 aa27.14■■□□□ 1.94
HMG20B-215ENST00000585741 IQGAP2Q13576 1575 aa27.14■■□□□ 1.94
HMG20B-215ENST00000585741 CARMIL2Q6F5E8 1435 aa27.13■■□□□ 1.93
HMG20B-215ENST00000585741 ABCC2Q92887 1545 aa27.12■■□□□ 1.93
HMG20B-215ENST00000585741 DISP1Q96F81 1524 aa27.11■■□□□ 1.93
HMG20B-215ENST00000585741 TTBK1Q5TCY1 1321 aaPredicted RBP27.09■■□□□ 1.93
HMG20B-215ENST00000585741 KDM6BO15054 1643 aa27.08■■□□□ 1.93
HMG20B-215ENST00000585741 UHRF1BP1LA0JNW5 1464 aa27.08■■□□□ 1.93
HMG20B-215ENST00000585741 TSPOAP1O95153 1857 aa27.07■■□□□ 1.92
HMG20B-215ENST00000585741 ASXL2Q76L83 1435 aa27.05■■□□□ 1.92
HMG20B-215ENST00000585741 UACAQ9BZF9 1416 aa27.03■■□□□ 1.92
HMG20B-215ENST00000585741 UGGT2Q9NYU1 1516 aa27.01■■□□□ 1.91
HMG20B-215ENST00000585741 GLI2P10070 1586 aa27.01■■□□□ 1.91
HMG20B-215ENST00000585741 PLB1Q6P1J6 1458 aa27■■□□□ 1.91
HMG20B-215ENST00000585741 KDM4FA0A1W2PPD8 638 aa27■■□□□ 1.91
HMG20B-215ENST00000585741 CEP162Q5TB80 1403 aa26.99■■□□□ 1.91
HMG20B-215ENST00000585741 PPRC1Q5VV67 1664 aaKnown RBP26.99■■□□□ 1.91
HMG20B-215ENST00000585741 CLIP1P30622 1438 aa26.99■■□□□ 1.91
HMG20B-215ENST00000585741 KDM5BQ9UGL1 1544 aa26.96■■□□□ 1.91
HMG20B-215ENST00000585741 KIAA0556O60303 1618 aa26.93■■□□□ 1.9
HMG20B-215ENST00000585741 P3H3Q8IVL6 736 aa26.9■■□□□ 1.9
HMG20B-215ENST00000585741 EPRSP07814 1512 aaKnown RBP26.9■■□□□ 1.9
HMG20B-215ENST00000585741 EFCAB5A4FU69 1503 aa26.89■■□□□ 1.89
HMG20B-215ENST00000585741 COL17A1Q9UMD9 1497 aaPredicted RBP26.87■■□□□ 1.89
HMG20B-215ENST00000585741 ZCCHC11Q5TAX3 1644 aaKnown RBP26.86■■□□□ 1.89
HMG20B-215ENST00000585741 MAP3K4Q9Y6R4 1608 aa26.84■■□□□ 1.89
HMG20B-215ENST00000585741 ARHGAP35Q9NRY4 1499 aa26.83■■□□□ 1.89
HMG20B-215ENST00000585741 SAMD9Q5K651 1589 aa26.8■■□□□ 1.88
HMG20B-215ENST00000585741 FHOD3Q2V2M9 1422 aa26.78■■□□□ 1.88
HMG20B-215ENST00000585741 WDR7Q9Y4E6 1490 aa26.74■■□□□ 1.87
HMG20B-215ENST00000585741 ABCA8O94911 1581 aa26.72■■□□□ 1.87
HMG20B-215ENST00000585741 TEX14Q8IWB6 1497 aa26.72■■□□□ 1.87
HMG20B-215ENST00000585741 FMN1Q68DA7 1419 aa26.7■■□□□ 1.86
HMG20B-215ENST00000585741 ADGRL1O94910 1474 aa26.68■■□□□ 1.86
HMG20B-215ENST00000585741 ATP1B4Q9UN42 357 aaPredicted RBP26.65■■□□□ 1.86
HMG20B-215ENST00000585741 VPS8Q8N3P4 1428 aa26.62■■□□□ 1.85
HMG20B-215ENST00000585741 MAGI3Q5TCQ9 1506 aa26.61■■□□□ 1.85
HMG20B-215ENST00000585741 CD109Q6YHK3 1445 aa26.58■■□□□ 1.85
HMG20B-215ENST00000585741 CFAP43Q8NDM7 1665 aa26.57■■□□□ 1.84
HMG20B-215ENST00000585741 KCNH8Q96L42 1107 aa26.57■■□□□ 1.84
HMG20B-215ENST00000585741 APLP2Q06481 763 aa26.56■■□□□ 1.84
HMG20B-215ENST00000585741 ATP10BO94823 1461 aa26.51■■□□□ 1.83
HMG20B-215ENST00000585741 CASKIN1Q8WXD9 1431 aa26.51■■□□□ 1.83
HMG20B-215ENST00000585741 FYCO1Q9BQS8 1478 aa26.48■■□□□ 1.83
HMG20B-215ENST00000585741 RAPGEF6Q8TEU7 1601 aa26.47■■□□□ 1.83
HMG20B-215ENST00000585741 PCF11O94913 1555 aaKnown RBP26.47■■□□□ 1.83
HMG20B-215ENST00000585741 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.46■■□□□ 1.83
HMG20B-215ENST00000585741 HNRNPUL2Q1KMD3 747 aaKnown RBP26.46■■□□□ 1.83
HMG20B-215ENST00000585741 HECW1Q76N89 1606 aa26.46■■□□□ 1.83
HMG20B-215ENST00000585741 ARID3CA6NKF2 412 aa26.44■■□□□ 1.82
HMG20B-215ENST00000585741 ARAP3Q8WWN8 1544 aa26.42■■□□□ 1.82
HMG20B-215ENST00000585741 ABCA9Q8IUA7 1624 aa26.37■■□□□ 1.81
HMG20B-215ENST00000585741 HECW2Q9P2P5 1572 aa26.37■■□□□ 1.81
HMG20B-215ENST00000585741 CCDC18Q5T9S5 1454 aa26.36■■□□□ 1.81
HMG20B-215ENST00000585741 NUP153P49790 1475 aaKnown RBP26.36■■□□□ 1.81
HMG20B-215ENST00000585741 CDK11AQ9UQ88 783 aaPredicted RBP26.34■■□□□ 1.81
HMG20B-215ENST00000585741 ILDR1Q86SU0 546 aaPredicted RBP26.31■■□□□ 1.8
HMG20B-215ENST00000585741 PHLDB1Q86UU1 1377 aa26.3■■□□□ 1.8
HMG20B-215ENST00000585741 CDK13Q14004 1512 aaKnown RBP26.28■■□□□ 1.8
HMG20B-215ENST00000585741 PLEKHD1A6NEE1 506 aa26.25■■□□□ 1.79
HMG20B-215ENST00000585741 TIAM1Q13009 1591 aa26.24■■□□□ 1.79
HMG20B-215ENST00000585741 MAP3K1Q13233 1512 aa26.24■■□□□ 1.79
HMG20B-215ENST00000585741 NEO1Q92859 1461 aa26.24■■□□□ 1.79
HMG20B-215ENST00000585741 MTUS2Q5JR59 1369 aa26.23■■□□□ 1.79
HMG20B-215ENST00000585741 RAPGEF3O95398 923 aa26.23■■□□□ 1.79
HMG20B-215ENST00000585741 FRMPD1Q5SYB0 1578 aa26.21■■□□□ 1.79
HMG20B-215ENST00000585741 PPARGC1BQ86YN6 1023 aaKnown RBP26.2■■□□□ 1.78
HMG20B-215ENST00000585741 LRRIQ1Q96JM4 1722 aa26.19■■□□□ 1.78
HMG20B-215ENST00000585741 ADAMTSL3P82987 1691 aa26.17■■□□□ 1.78
HMG20B-215ENST00000585741 KANK4Q5T7N3 995 aaPredicted RBP26.15■■□□□ 1.78
HMG20B-215ENST00000585741 LRRC9Q6ZRR7 1453 aa26.15■■□□□ 1.78
HMG20B-215ENST00000585741 PTPRMP28827 1452 aa26.12■■□□□ 1.77
HMG20B-215ENST00000585741 EHBP1L1Q8N3D4 1523 aa26.12■■□□□ 1.77
HMG20B-215ENST00000585741 TROQ12816 1431 aaPredicted RBP26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms