RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 CTTNBP2Q8WZ74 1663 aa23.46■■□□□ 1.35
CDK5RAP3-236ENST00000584991 SYNJ2O15056 1496 aa23.41■■□□□ 1.34
CDK5RAP3-236ENST00000584991 CHMP7Q8WUX9 453 aaPredicted RBP23.39■■□□□ 1.34
CDK5RAP3-236ENST00000584991 GRIN2AQ12879 1464 aa23.39■■□□□ 1.33
CDK5RAP3-236ENST00000584991 FBLN2P98095 1184 aa23.37■■□□□ 1.33
CDK5RAP3-236ENST00000584991 ZEB1P37275 1124 aaPredicted RBP23.33■■□□□ 1.33
CDK5RAP3-236ENST00000584991 ARHGAP35Q9NRY4 1499 aa23.32■■□□□ 1.32
CDK5RAP3-236ENST00000584991 ARAP1Q96P48 1450 aa23.28■■□□□ 1.32
CDK5RAP3-236ENST00000584991 IQGAP2Q13576 1575 aa23.26■■□□□ 1.31
CDK5RAP3-236ENST00000584991 CHD1O14646 1710 aa23.26■■□□□ 1.31
CDK5RAP3-236ENST00000584991 CEP170Q5SW79 1584 aa23.26■■□□□ 1.31
CDK5RAP3-236ENST00000584991 VPS8Q8N3P4 1428 aa23.24■■□□□ 1.31
CDK5RAP3-236ENST00000584991 KIAA0586Q9BVV6 1533 aa23.24■■□□□ 1.31
CDK5RAP3-236ENST00000584991 EFCAB5A4FU69 1503 aa23.22■■□□□ 1.31
CDK5RAP3-236ENST00000584991 NUP160Q12769 1436 aa23.22■■□□□ 1.31
CDK5RAP3-236ENST00000584991 P3H3Q8IVL6 736 aa23.22■■□□□ 1.31
CDK5RAP3-236ENST00000584991 SAMD9Q5K651 1589 aa23.18■■□□□ 1.3
CDK5RAP3-236ENST00000584991 FHOD3Q2V2M9 1422 aa23.15■■□□□ 1.3
CDK5RAP3-236ENST00000584991 UGGT2Q9NYU1 1516 aa23.14■■□□□ 1.29
CDK5RAP3-236ENST00000584991 PPARGC1BQ86YN6 1023 aaKnown RBP23.13■■□□□ 1.29
CDK5RAP3-236ENST00000584991 JPH4Q96JJ6 628 aa23.06■■□□□ 1.28
CDK5RAP3-236ENST00000584991 DISP1Q96F81 1524 aa23.04■■□□□ 1.28
CDK5RAP3-236ENST00000584991 KIAA0556O60303 1618 aa23.03■■□□□ 1.28
CDK5RAP3-236ENST00000584991 APLP2Q06481 763 aa23.02■■□□□ 1.28
CDK5RAP3-236ENST00000584991 FMN1Q68DA7 1419 aa23.02■■□□□ 1.28
CDK5RAP3-236ENST00000584991 PCF11O94913 1555 aaKnown RBP22.99■■□□□ 1.27
CDK5RAP3-236ENST00000584991 CARMIL2Q6F5E8 1435 aa22.96■■□□□ 1.27
CDK5RAP3-236ENST00000584991 TTBK1Q5TCY1 1321 aaPredicted RBP22.95■■□□□ 1.27
CDK5RAP3-236ENST00000584991 CLASP1Q7Z460 1538 aa22.95■■□□□ 1.26
CDK5RAP3-236ENST00000584991 CASKIN1Q8WXD9 1431 aa22.95■■□□□ 1.26
CDK5RAP3-236ENST00000584991 ATP1B4Q9UN42 357 aaPredicted RBP22.94■■□□□ 1.26
CDK5RAP3-236ENST00000584991 SHROOM2Q13796 1616 aa22.94■■□□□ 1.26
CDK5RAP3-236ENST00000584991 FYCO1Q9BQS8 1478 aa22.93■■□□□ 1.26
CDK5RAP3-236ENST00000584991 PRG4Q92954 1404 aaPredicted RBP22.93■■□□□ 1.26
CDK5RAP3-236ENST00000584991 TIAM1Q13009 1591 aa22.86■■□□□ 1.25
CDK5RAP3-236ENST00000584991 MAP3K1Q13233 1512 aa22.85■■□□□ 1.25
CDK5RAP3-236ENST00000584991 KANK4Q5T7N3 995 aaPredicted RBP22.85■■□□□ 1.25
CDK5RAP3-236ENST00000584991 OSCARQ8IYS5 282 aa22.85■■□□□ 1.25
CDK5RAP3-236ENST00000584991 LRRIQ1Q96JM4 1722 aa22.84■■□□□ 1.25
CDK5RAP3-236ENST00000584991 CFAP43Q8NDM7 1665 aa22.83■■□□□ 1.25
CDK5RAP3-236ENST00000584991 ERCC6L2Q5T890 1561 aa22.82■■□□□ 1.24
CDK5RAP3-236ENST00000584991 HECW1Q76N89 1606 aa22.81■■□□□ 1.24
CDK5RAP3-236ENST00000584991 RAPGEF6Q8TEU7 1601 aa22.79■■□□□ 1.24
CDK5RAP3-236ENST00000584991 PLB1Q6P1J6 1458 aa22.76■■□□□ 1.23
CDK5RAP3-236ENST00000584991 PTPRGP23470 1445 aa22.75■■□□□ 1.23
CDK5RAP3-236ENST00000584991 LRRC9Q6ZRR7 1453 aa22.75■■□□□ 1.23
CDK5RAP3-236ENST00000584991 CCDC18Q5T9S5 1454 aa22.74■■□□□ 1.23
CDK5RAP3-236ENST00000584991 EPRSP07814 1512 aaKnown RBP22.73■■□□□ 1.23
CDK5RAP3-236ENST00000584991 ARID3CA6NKF2 412 aa22.72■■□□□ 1.23
CDK5RAP3-236ENST00000584991 NUP153P49790 1475 aaKnown RBP22.72■■□□□ 1.23
CDK5RAP3-236ENST00000584991 ABCA8O94911 1581 aa22.71■■□□□ 1.23
CDK5RAP3-236ENST00000584991 CDK13Q14004 1512 aaKnown RBP22.7■■□□□ 1.22
CDK5RAP3-236ENST00000584991 MTUS2Q5JR59 1369 aa22.66■■□□□ 1.22
CDK5RAP3-236ENST00000584991 MAGI3Q5TCQ9 1506 aa22.63■■□□□ 1.21
CDK5RAP3-236ENST00000584991 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.62■■□□□ 1.21
CDK5RAP3-236ENST00000584991 HNRNPUL2Q1KMD3 747 aaKnown RBP22.62■■□□□ 1.21
CDK5RAP3-236ENST00000584991 UACAQ9BZF9 1416 aa22.62■■□□□ 1.21
CDK5RAP3-236ENST00000584991 EHBP1L1Q8N3D4 1523 aa22.6■■□□□ 1.21
CDK5RAP3-236ENST00000584991 ATP10BO94823 1461 aa22.56■■□□□ 1.2
CDK5RAP3-236ENST00000584991 ABCC2Q92887 1545 aa22.55■■□□□ 1.2
CDK5RAP3-236ENST00000584991 SUPT6HQ7KZ85 1726 aaKnown RBP22.55■■□□□ 1.2
CDK5RAP3-236ENST00000584991 CDK11AQ9UQ88 783 aaPredicted RBP22.55■■□□□ 1.2
CDK5RAP3-236ENST00000584991 PHLDB1Q86UU1 1377 aa22.54■■□□□ 1.2
CDK5RAP3-236ENST00000584991 NCOA2Q15596 1464 aa22.52■■□□□ 1.2
CDK5RAP3-236ENST00000584991 CCER1Q8TC90 406 aaPredicted RBP22.5■■□□□ 1.19
CDK5RAP3-236ENST00000584991 RRBP1Q9P2E9 1410 aaKnown RBP22.5■■□□□ 1.19
CDK5RAP3-236ENST00000584991 UHRF1BP1LA0JNW5 1464 aa22.5■■□□□ 1.19
CDK5RAP3-236ENST00000584991 TROQ12816 1431 aaPredicted RBP22.48■■□□□ 1.19
CDK5RAP3-236ENST00000584991 ARHGEF11O15085 1522 aa22.47■■□□□ 1.19
CDK5RAP3-236ENST00000584991 PLEKHD1A6NEE1 506 aa22.46■■□□□ 1.19
CDK5RAP3-236ENST00000584991 CCNB3Q8WWL7 1395 aa22.45■■□□□ 1.19
CDK5RAP3-236ENST00000584991 ADCY10Q96PN6 1610 aa22.45■■□□□ 1.18
CDK5RAP3-236ENST00000584991 ZCCHC11Q5TAX3 1644 aaKnown RBP22.42■■□□□ 1.18
CDK5RAP3-236ENST00000584991 KDM5BQ9UGL1 1544 aa22.42■■□□□ 1.18
CDK5RAP3-236ENST00000584991 MYOM3Q5VTT5 1437 aa22.41■■□□□ 1.18
CDK5RAP3-236ENST00000584991 KIF14Q15058 1648 aa22.4■■□□□ 1.18
CDK5RAP3-236ENST00000584991 FGD6Q6ZV73 1430 aa22.39■■□□□ 1.17
CDK5RAP3-236ENST00000584991 RIMBP3CA6NJZ7 1639 aa22.38■■□□□ 1.17
CDK5RAP3-236ENST00000584991 RIMBP3BA6NNM3 1639 aa22.38■■□□□ 1.17
CDK5RAP3-236ENST00000584991 RIMBP3Q9UFD9 1639 aa22.38■■□□□ 1.17
CDK5RAP3-236ENST00000584991 FAM50AQ14320 339 aaKnown RBP22.37■■□□□ 1.17
CDK5RAP3-236ENST00000584991 PTPN23Q9H3S7 1636 aa22.31■■□□□ 1.16
CDK5RAP3-236ENST00000584991 ITGAEP38570 1179 aa22.3■■□□□ 1.16
CDK5RAP3-236ENST00000584991 ABCC10Q5T3U5 1492 aa22.3■■□□□ 1.16
CDK5RAP3-236ENST00000584991 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.29■■□□□ 1.16
CDK5RAP3-236ENST00000584991 CYB5RLQ6IPT4 315 aa22.28■■□□□ 1.16
CDK5RAP3-236ENST00000584991 MIA2Q96PC5 1412 aa22.28■■□□□ 1.16
CDK5RAP3-236ENST00000584991 ITSN2Q9NZM3 1697 aa22.28■■□□□ 1.16
CDK5RAP3-236ENST00000584991 GPATCH8Q9UKJ3 1502 aaKnown RBP22.27■■□□□ 1.16
CDK5RAP3-236ENST00000584991 NPM1P06748 294 aaKnown RBP eCLIP22.26■■□□□ 1.15
CDK5RAP3-236ENST00000584991 KCNH8Q96L42 1107 aa22.26■■□□□ 1.15
CDK5RAP3-236ENST00000584991 CDC42BPAQ5VT25 1732 aa22.26■■□□□ 1.15
CDK5RAP3-236ENST00000584991 TCOF1Q13428 1488 aaKnown RBP22.25■■□□□ 1.15
CDK5RAP3-236ENST00000584991 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.22■■□□□ 1.153e-9■■□□□ 12.3
CDK5RAP3-236ENST00000584991 CFDP1Q9UEE9 299 aaPredicted RBP22.22■■□□□ 1.15
CDK5RAP3-236ENST00000584991 WDR7Q9Y4E6 1490 aa22.21■■□□□ 1.15
CDK5RAP3-236ENST00000584991 TTC37Q6PGP7 1564 aa22.21■■□□□ 1.15
CDK5RAP3-236ENST00000584991 ASXL2Q76L83 1435 aa22.2■■□□□ 1.14
CDK5RAP3-236ENST00000584991 ZNF644Q9H582 1327 aaPredicted RBP22.18■■□□□ 1.14
CDK5RAP3-236ENST00000584991 ZNF777Q9ULD5 760 aaPredicted RBP22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms