RNA–Protein interactions for RNA: ENST00000584913.1

CSNK1D-225, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 295 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-225ENST00000584913 ERCC6L2Q5T890 1561 aa28.63■■■□□ 2.17
CSNK1D-225ENST00000584913 JPH4Q96JJ6 628 aa28.59■■■□□ 2.17
CSNK1D-225ENST00000584913 PRG4Q92954 1404 aaPredicted RBP28.59■■■□□ 2.17
CSNK1D-225ENST00000584913 RAPGEF2Q9Y4G8 1499 aa28.53■■■□□ 2.16
CSNK1D-225ENST00000584913 IQGAP2Q13576 1575 aa28.46■■■□□ 2.15
CSNK1D-225ENST00000584913 PRXQ9BXM0 1461 aa28.4■■■□□ 2.14
CSNK1D-225ENST00000584913 EEA1Q15075 1411 aa28.38■■■□□ 2.13
CSNK1D-225ENST00000584913 CARMIL2Q6F5E8 1435 aa28.37■■■□□ 2.13
CSNK1D-225ENST00000584913 UGGT2Q9NYU1 1516 aa28.34■■■□□ 2.13
CSNK1D-225ENST00000584913 CTTNBP2Q8WZ74 1663 aa28.3■■■□□ 2.12
CSNK1D-225ENST00000584913 TNIKQ9UKE5 1360 aa28.27■■■□□ 2.12
CSNK1D-225ENST00000584913 TRHP20396 242 aaPredicted RBP28.27■■■□□ 2.12
CSNK1D-225ENST00000584913 DISP1Q96F81 1524 aa28.25■■■□□ 2.11
CSNK1D-225ENST00000584913 ADCY10Q96PN6 1610 aa28.23■■■□□ 2.11
CSNK1D-225ENST00000584913 MAPKBP1O60336 1514 aa28.23■■■□□ 2.11
CSNK1D-225ENST00000584913 PTPRGP23470 1445 aa28.22■■■□□ 2.11
CSNK1D-225ENST00000584913 KIAA0556O60303 1618 aa28.2■■■□□ 2.1
CSNK1D-225ENST00000584913 CSRNP3Q8WYN3 585 aa28.19■■■□□ 2.1
CSNK1D-225ENST00000584913 GOLGA3Q08378 1498 aa28.17■■■□□ 2.1
CSNK1D-225ENST00000584913 UHRF1BP1LA0JNW5 1464 aa28.15■■■□□ 2.1
CSNK1D-225ENST00000584913 NPM1P06748 294 aaKnown RBP eCLIP28.12■■■□□ 2.09
CSNK1D-225ENST00000584913 ABCC2Q92887 1545 aa28.08■■■□□ 2.09
CSNK1D-225ENST00000584913 UACAQ9BZF9 1416 aa28.07■■■□□ 2.08
CSNK1D-225ENST00000584913 CHIC1Q5VXU3 224 aa28.06■■■□□ 2.08
CSNK1D-225ENST00000584913 KIF21BO75037 1637 aa28.06■■■□□ 2.08
CSNK1D-225ENST00000584913 ABCC10Q5T3U5 1492 aa28.05■■■□□ 2.08
CSNK1D-225ENST00000584913 KIF13AQ9H1H9 1805 aa28.04■■■□□ 2.08
CSNK1D-225ENST00000584913 DIP2BQ9P265 1576 aa28■■■□□ 2.07
CSNK1D-225ENST00000584913 KDM5BQ9UGL1 1544 aa27.97■■■□□ 2.07
CSNK1D-225ENST00000584913 SAMD9Q5K651 1589 aa27.95■■■□□ 2.07
CSNK1D-225ENST00000584913 PLB1Q6P1J6 1458 aa27.94■■■□□ 2.06
CSNK1D-225ENST00000584913 ABCA8O94911 1581 aa27.9■■■□□ 2.06
CSNK1D-225ENST00000584913 GLI2P10070 1586 aa27.86■■■□□ 2.05
CSNK1D-225ENST00000584913 ASXL2Q76L83 1435 aa27.86■■■□□ 2.05
CSNK1D-225ENST00000584913 ZCCHC11Q5TAX3 1644 aaKnown RBP27.85■■■□□ 2.05
CSNK1D-225ENST00000584913 TTBK1Q5TCY1 1321 aaPredicted RBP27.85■■■□□ 2.05
CSNK1D-225ENST00000584913 FAM69CQ0P6D2 419 aa27.84■■■□□ 2.05
CSNK1D-225ENST00000584913 FAM9AQ8IZU1 332 aaPredicted RBP27.84■■■□□ 2.05
CSNK1D-225ENST00000584913 EFCAB5A4FU69 1503 aa27.82■■■□□ 2.04
CSNK1D-225ENST00000584913 EPRSP07814 1512 aaKnown RBP27.74■■■□□ 2.03
CSNK1D-225ENST00000584913 WDR7Q9Y4E6 1490 aa27.74■■■□□ 2.03
CSNK1D-225ENST00000584913 RAPGEF6Q8TEU7 1601 aa27.69■■■□□ 2.02
CSNK1D-225ENST00000584913 MAP3K4Q9Y6R4 1608 aa27.67■■■□□ 2.02
CSNK1D-225ENST00000584913 PPRC1Q5VV67 1664 aaKnown RBP27.62■■■□□ 2.01
CSNK1D-225ENST00000584913 FHOD3Q2V2M9 1422 aa27.62■■■□□ 2.01
CSNK1D-225ENST00000584913 P3H3Q8IVL6 736 aa27.61■■■□□ 2.01
CSNK1D-225ENST00000584913 ATP10BO94823 1461 aa27.6■■■□□ 2.01
CSNK1D-225ENST00000584913 KDM6BO15054 1643 aa27.59■■■□□ 2.01
CSNK1D-225ENST00000584913 TEX14Q8IWB6 1497 aa27.59■■■□□ 2.01
CSNK1D-225ENST00000584913 CFAP43Q8NDM7 1665 aa27.59■■■□□ 2.01
CSNK1D-225ENST00000584913 TSPOAP1O95153 1857 aa27.58■■■□□ 2.01
CSNK1D-225ENST00000584913 UBTFP17480 764 aaKnown RBP27.58■■■□□ 2.01
CSNK1D-225ENST00000584913 NUP153P49790 1475 aaKnown RBP27.57■■■□□ 2
CSNK1D-225ENST00000584913 MAGI3Q5TCQ9 1506 aa27.52■■■□□ 2
CSNK1D-225ENST00000584913 FMN1Q68DA7 1419 aa27.52■■■□□ 2
CSNK1D-225ENST00000584913 ARHGAP35Q9NRY4 1499 aa27.51■■■□□ 2
CSNK1D-225ENST00000584913 ABCA9Q8IUA7 1624 aa27.46■■□□□ 1.99
CSNK1D-225ENST00000584913 CD109Q6YHK3 1445 aa27.45■■□□□ 1.98
CSNK1D-225ENST00000584913 RANGAP1P46060 587 aaPredicted RBP27.44■■□□□ 1.98
CSNK1D-225ENST00000584913 HECW1Q76N89 1606 aa27.42■■□□□ 1.98
CSNK1D-225ENST00000584913 KCNH8Q96L42 1107 aa27.36■■□□□ 1.97
CSNK1D-225ENST00000584913 PHLDB1Q86UU1 1377 aa27.35■■□□□ 1.97
CSNK1D-225ENST00000584913 PLEKHD1A6NEE1 506 aa27.32■■□□□ 1.96
CSNK1D-225ENST00000584913 ARID3CA6NKF2 412 aa27.31■■□□□ 1.96
CSNK1D-225ENST00000584913 EHMT2Q96KQ7 1210 aa27.31■■□□□ 1.96
CSNK1D-225ENST00000584913 COL17A1Q9UMD9 1497 aaPredicted RBP27.31■■□□□ 1.96
CSNK1D-225ENST00000584913 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.3■■□□□ 1.96
CSNK1D-225ENST00000584913 HNRNPUL2Q1KMD3 747 aaKnown RBP27.3■■□□□ 1.96
CSNK1D-225ENST00000584913 ARAP3Q8WWN8 1544 aa27.29■■□□□ 1.96
CSNK1D-225ENST00000584913 NEO1Q92859 1461 aa27.28■■□□□ 1.96
CSNK1D-225ENST00000584913 CDK13Q14004 1512 aaKnown RBP27.27■■□□□ 1.96
CSNK1D-225ENST00000584913 CLIP1P30622 1438 aa27.24■■□□□ 1.95
CSNK1D-225ENST00000584913 CASKIN1Q8WXD9 1431 aa27.24■■□□□ 1.95
CSNK1D-225ENST00000584913 CCDC18Q5T9S5 1454 aa27.23■■□□□ 1.95
CSNK1D-225ENST00000584913 CDK11AQ9UQ88 783 aaPredicted RBP27.22■■□□□ 1.95
CSNK1D-225ENST00000584913 CFAP74Q9C0B2 1584 aa27.22■■□□□ 1.95
CSNK1D-225ENST00000584913 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.21■■□□□ 1.95
CSNK1D-225ENST00000584913 FYCO1Q9BQS8 1478 aa27.2■■□□□ 1.95
CSNK1D-225ENST00000584913 PCF11O94913 1555 aaKnown RBP27.19■■□□□ 1.94
CSNK1D-225ENST00000584913 TTC37Q6PGP7 1564 aa27.16■■□□□ 1.94
CSNK1D-225ENST00000584913 TROQ12816 1431 aaPredicted RBP27.15■■□□□ 1.94
CSNK1D-225ENST00000584913 LRRIQ1Q96JM4 1722 aa27.14■■□□□ 1.94
CSNK1D-225ENST00000584913 KIF14Q15058 1648 aa27.13■■□□□ 1.93
CSNK1D-225ENST00000584913 FANCAO15360 1455 aa27.1■■□□□ 1.93
CSNK1D-225ENST00000584913 PLCH2O75038 1416 aa27.08■■□□□ 1.93
CSNK1D-225ENST00000584913 AEBP2Q6ZN18 517 aaPredicted RBP27.07■■□□□ 1.92
CSNK1D-225ENST00000584913 ATP1B4Q9UN42 357 aaPredicted RBP27.07■■□□□ 1.92
CSNK1D-225ENST00000584913 CEP162Q5TB80 1403 aa27.06■■□□□ 1.92
CSNK1D-225ENST00000584913 MYO5CQ9NQX4 1742 aa27.05■■□□□ 1.92
CSNK1D-225ENST00000584913 AKNAQ7Z591 1439 aa27.04■■□□□ 1.92
CSNK1D-225ENST00000584913 FRMPD1Q5SYB0 1578 aa27.03■■□□□ 1.92
CSNK1D-225ENST00000584913 DENND4BO75064 1496 aaPredicted RBP27■■□□□ 1.91
CSNK1D-225ENST00000584913 RICTORQ6R327 1708 aa26.99■■□□□ 1.91
CSNK1D-225ENST00000584913 ZMYM4Q5VZL5 1548 aa26.99■■□□□ 1.91
CSNK1D-225ENST00000584913 ADGRL1O94910 1474 aa26.95■■□□□ 1.91
CSNK1D-225ENST00000584913 KDM4FA0A1W2PPD8 638 aa26.95■■□□□ 1.9
CSNK1D-225ENST00000584913 MAGI2Q86UL8 1455 aa26.93■■□□□ 1.9
CSNK1D-225ENST00000584913 ARHGEF40Q8TER5 1519 aa26.92■■□□□ 1.9
CSNK1D-225ENST00000584913 PREX2Q70Z35 1606 aa26.92■■□□□ 1.9
CSNK1D-225ENST00000584913 EFCAB2Q5VUJ9 269 aa26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms