RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 PRG4Q92954 1404 aaPredicted RBP31.04■■■□□ 2.56
SRSF1-208ENST00000584773 JPH4Q96JJ6 628 aa31.01■■■□□ 2.56
SRSF1-208ENST00000584773 CARMIL1Q5VZK9 1371 aa30.99■■■□□ 2.55
SRSF1-208ENST00000584773 KIAA0586Q9BVV6 1533 aa30.93■■■□□ 2.54
SRSF1-208ENST00000584773 RAPGEF2Q9Y4G8 1499 aa30.75■■■□□ 2.51
SRSF1-208ENST00000584773 IQGAP2Q13576 1575 aa30.73■■■□□ 2.51
SRSF1-208ENST00000584773 ADCY10Q96PN6 1610 aa30.67■■■□□ 2.5
SRSF1-208ENST00000584773 TTBK1Q5TCY1 1321 aaPredicted RBP30.65■■■□□ 2.5
SRSF1-208ENST00000584773 DISP1Q96F81 1524 aa30.58■■■□□ 2.49
SRSF1-208ENST00000584773 PTPRGP23470 1445 aa30.57■■■□□ 2.48
SRSF1-208ENST00000584773 CARMIL2Q6F5E8 1435 aa30.57■■■□□ 2.48
SRSF1-208ENST00000584773 KIF13AQ9H1H9 1805 aa30.55■■■□□ 2.48
SRSF1-208ENST00000584773 TNIKQ9UKE5 1360 aa30.55■■■□□ 2.48
SRSF1-208ENST00000584773 PRXQ9BXM0 1461 aa30.55■■■□□ 2.48
SRSF1-208ENST00000584773 CTTNBP2Q8WZ74 1663 aa30.54■■■□□ 2.48
SRSF1-208ENST00000584773 UGGT2Q9NYU1 1516 aa30.53■■■□□ 2.48
SRSF1-208ENST00000584773 NPM1P06748 294 aaKnown RBP eCLIP30.49■■■□□ 2.47
SRSF1-208ENST00000584773 MAPKBP1O60336 1514 aa30.48■■■□□ 2.47
SRSF1-208ENST00000584773 KIAA0556O60303 1618 aa30.47■■■□□ 2.47
SRSF1-208ENST00000584773 ABCC10Q5T3U5 1492 aa30.41■■■□□ 2.46
SRSF1-208ENST00000584773 DIP2BQ9P265 1576 aa30.4■■■□□ 2.46
SRSF1-208ENST00000584773 CSRNP3Q8WYN3 585 aa30.39■■■□□ 2.46
SRSF1-208ENST00000584773 FAM69CQ0P6D2 419 aa30.38■■■□□ 2.45
SRSF1-208ENST00000584773 ABCC2Q92887 1545 aa30.37■■■□□ 2.45
SRSF1-208ENST00000584773 UACAQ9BZF9 1416 aa30.36■■■□□ 2.45
SRSF1-208ENST00000584773 FAM9AQ8IZU1 332 aaPredicted RBP30.33■■■□□ 2.45
SRSF1-208ENST00000584773 UHRF1BP1LA0JNW5 1464 aa30.33■■■□□ 2.45
SRSF1-208ENST00000584773 EEA1Q15075 1411 aa30.28■■■□□ 2.44
SRSF1-208ENST00000584773 GOLGA3Q08378 1498 aa30.26■■■□□ 2.43
SRSF1-208ENST00000584773 ASXL2Q76L83 1435 aa30.25■■■□□ 2.43
SRSF1-208ENST00000584773 CHIC1Q5VXU3 224 aa30.24■■■□□ 2.43
SRSF1-208ENST00000584773 PLB1Q6P1J6 1458 aa30.24■■■□□ 2.43
SRSF1-208ENST00000584773 TSPOAP1O95153 1857 aa30.23■■■□□ 2.43
SRSF1-208ENST00000584773 ZCCHC11Q5TAX3 1644 aaKnown RBP30.22■■■□□ 2.43
SRSF1-208ENST00000584773 KDM5BQ9UGL1 1544 aa30.21■■■□□ 2.43
SRSF1-208ENST00000584773 P3H3Q8IVL6 736 aa30.18■■■□□ 2.42
SRSF1-208ENST00000584773 ABCA8O94911 1581 aa30.15■■■□□ 2.42
SRSF1-208ENST00000584773 SAMD9Q5K651 1589 aa30.11■■■□□ 2.41
SRSF1-208ENST00000584773 RANGAP1P46060 587 aaPredicted RBP30.1■■■□□ 2.41
SRSF1-208ENST00000584773 KIF21BO75037 1637 aa30.09■■■□□ 2.41
SRSF1-208ENST00000584773 GLI2P10070 1586 aa30.08■■■□□ 2.41
SRSF1-208ENST00000584773 EPRSP07814 1512 aaKnown RBP30.06■■■□□ 2.4
SRSF1-208ENST00000584773 EHMT2Q96KQ7 1210 aa30.06■■■□□ 2.4
SRSF1-208ENST00000584773 PPRC1Q5VV67 1664 aaKnown RBP30.05■■■□□ 2.4
SRSF1-208ENST00000584773 ARID3CA6NKF2 412 aa30.01■■■□□ 2.4
SRSF1-208ENST00000584773 KDM6BO15054 1643 aa30.01■■■□□ 2.39
SRSF1-208ENST00000584773 WDR7Q9Y4E6 1490 aa30■■■□□ 2.39
SRSF1-208ENST00000584773 MAP3K4Q9Y6R4 1608 aa29.97■■■□□ 2.39
SRSF1-208ENST00000584773 FHOD3Q2V2M9 1422 aa29.96■■■□□ 2.39
SRSF1-208ENST00000584773 RAPGEF6Q8TEU7 1601 aa29.91■■■□□ 2.38
SRSF1-208ENST00000584773 ATP10BO94823 1461 aa29.9■■■□□ 2.38
SRSF1-208ENST00000584773 KCNH8Q96L42 1107 aa29.89■■■□□ 2.38
SRSF1-208ENST00000584773 UBTFP17480 764 aaKnown RBP29.85■■■□□ 2.37
SRSF1-208ENST00000584773 EFCAB5A4FU69 1503 aa29.83■■■□□ 2.37
SRSF1-208ENST00000584773 NUP153P49790 1475 aaKnown RBP29.81■■■□□ 2.36
SRSF1-208ENST00000584773 COL17A1Q9UMD9 1497 aaPredicted RBP29.81■■■□□ 2.36
SRSF1-208ENST00000584773 CFAP43Q8NDM7 1665 aa29.79■■■□□ 2.36
SRSF1-208ENST00000584773 TEX14Q8IWB6 1497 aa29.78■■■□□ 2.36
SRSF1-208ENST00000584773 CD109Q6YHK3 1445 aa29.76■■■□□ 2.36
SRSF1-208ENST00000584773 AEBP2Q6ZN18 517 aaPredicted RBP29.76■■■□□ 2.36
SRSF1-208ENST00000584773 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.73■■■□□ 2.35
SRSF1-208ENST00000584773 HNRNPUL2Q1KMD3 747 aaKnown RBP29.73■■■□□ 2.35
SRSF1-208ENST00000584773 MAGI3Q5TCQ9 1506 aa29.71■■■□□ 2.35
SRSF1-208ENST00000584773 ARHGAP35Q9NRY4 1499 aa29.7■■■□□ 2.35
SRSF1-208ENST00000584773 ABCA9Q8IUA7 1624 aa29.65■■■□□ 2.34
SRSF1-208ENST00000584773 CDK13Q14004 1512 aaKnown RBP29.61■■■□□ 2.33
SRSF1-208ENST00000584773 KDM4FA0A1W2PPD8 638 aa29.55■■■□□ 2.32
SRSF1-208ENST00000584773 FMN1Q68DA7 1419 aa29.54■■■□□ 2.32
SRSF1-208ENST00000584773 PLEKHD1A6NEE1 506 aa29.53■■■□□ 2.32
SRSF1-208ENST00000584773 ATP1B4Q9UN42 357 aaPredicted RBP29.53■■■□□ 2.32
SRSF1-208ENST00000584773 HECW1Q76N89 1606 aa29.51■■■□□ 2.32
SRSF1-208ENST00000584773 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.47■■■□□ 2.314e-20■□□□□ 9.3
SRSF1-208ENST00000584773 ARAP3Q8WWN8 1544 aa29.46■■■□□ 2.31
SRSF1-208ENST00000584773 TTC37Q6PGP7 1564 aa29.46■■■□□ 2.31
SRSF1-208ENST00000584773 LRRIQ1Q96JM4 1722 aa29.46■■■□□ 2.31
SRSF1-208ENST00000584773 ADGRL1O94910 1474 aa29.41■■■□□ 2.3
SRSF1-208ENST00000584773 NEO1Q92859 1461 aa29.4■■■□□ 2.3
SRSF1-208ENST00000584773 PCF11O94913 1555 aaKnown RBP29.4■■■□□ 2.3
SRSF1-208ENST00000584773 RAPGEF3O95398 923 aa29.37■■■□□ 2.29
SRSF1-208ENST00000584773 FRMPD1Q5SYB0 1578 aa29.36■■■□□ 2.29
SRSF1-208ENST00000584773 PHLDB1Q86UU1 1377 aa29.35■■■□□ 2.29
SRSF1-208ENST00000584773 CLIP1P30622 1438 aa29.34■■■□□ 2.29
SRSF1-208ENST00000584773 KIF14Q15058 1648 aa29.33■■■□□ 2.29
SRSF1-208ENST00000584773 FANCAO15360 1455 aa29.32■■■□□ 2.28
SRSF1-208ENST00000584773 CASKIN1Q8WXD9 1431 aa29.3■■■□□ 2.28
SRSF1-208ENST00000584773 AKNAQ7Z591 1439 aa29.29■■■□□ 2.28
SRSF1-208ENST00000584773 CFAP74Q9C0B2 1584 aa29.27■■■□□ 2.28
SRSF1-208ENST00000584773 TROQ12816 1431 aaPredicted RBP29.26■■■□□ 2.28
SRSF1-208ENST00000584773 RICTORQ6R327 1708 aa29.25■■■□□ 2.27
SRSF1-208ENST00000584773 CDK11AQ9UQ88 783 aaPredicted RBP29.24■■■□□ 2.27
SRSF1-208ENST00000584773 PLCH2O75038 1416 aa29.23■■■□□ 2.27
SRSF1-208ENST00000584773 DENND4BO75064 1496 aaPredicted RBP29.23■■■□□ 2.27
SRSF1-208ENST00000584773 MYO5CQ9NQX4 1742 aa29.22■■■□□ 2.27
SRSF1-208ENST00000584773 CCDC18Q5T9S5 1454 aa29.2■■■□□ 2.27
SRSF1-208ENST00000584773 FYCO1Q9BQS8 1478 aa29.2■■■□□ 2.27
SRSF1-208ENST00000584773 CEP162Q5TB80 1403 aa29.13■■■□□ 2.25
SRSF1-208ENST00000584773 ARHGEF40Q8TER5 1519 aa29.12■■■□□ 2.25
SRSF1-208ENST00000584773 SCAPERQ9BY12 1400 aa29.12■■■□□ 2.25
SRSF1-208ENST00000584773 ARHGAP5Q13017 1502 aa29.11■■■□□ 2.25
SRSF1-208ENST00000584773 ZMYM4Q5VZL5 1548 aa29.09■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms