RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-223ENST00000584760 JPH4Q96JJ6 628 aa22.96■■□□□ 1.27
SREBF1-223ENST00000584760 IGF1RP08069 1367 aa22.93■■□□□ 1.26
SREBF1-223ENST00000584760 RUSC2Q8N2Y8 1516 aa22.92■■□□□ 1.26
SREBF1-223ENST00000584760 NPM1P06748 294 aaKnown RBP eCLIP22.88■■□□□ 1.25
SREBF1-223ENST00000584760 FAM69CQ0P6D2 419 aa22.88■■□□□ 1.25
SREBF1-223ENST00000584760 KIF13AQ9H1H9 1805 aa22.86■■□□□ 1.25
SREBF1-223ENST00000584760 ABCC10Q5T3U5 1492 aa22.79■■□□□ 1.24
SREBF1-223ENST00000584760 CARMIL1Q5VZK9 1371 aa22.78■■□□□ 1.24
SREBF1-223ENST00000584760 KIAA0586Q9BVV6 1533 aa22.75■■□□□ 1.23
SREBF1-223ENST00000584760 MAPKBP1O60336 1514 aa22.71■■□□□ 1.23
SREBF1-223ENST00000584760 ADCY10Q96PN6 1610 aa22.69■■□□□ 1.22
SREBF1-223ENST00000584760 DIP2BQ9P265 1576 aa22.68■■□□□ 1.22
SREBF1-223ENST00000584760 RAPGEF2Q9Y4G8 1499 aa22.66■■□□□ 1.22
SREBF1-223ENST00000584760 IQGAP2Q13576 1575 aa22.65■■□□□ 1.22
SREBF1-223ENST00000584760 TTBK1Q5TCY1 1321 aaPredicted RBP22.64■■□□□ 1.22
SREBF1-223ENST00000584760 KDM4FA0A1W2PPD8 638 aa22.63■■□□□ 1.21
SREBF1-223ENST00000584760 KDM6BO15054 1643 aa22.6■■□□□ 1.21
SREBF1-223ENST00000584760 CTTNBP2Q8WZ74 1663 aa22.59■■□□□ 1.21
SREBF1-223ENST00000584760 PTPRGP23470 1445 aa22.58■■□□□ 1.21
SREBF1-223ENST00000584760 PRXQ9BXM0 1461 aa22.58■■□□□ 1.2
SREBF1-223ENST00000584760 TSPOAP1O95153 1857 aa22.54■■□□□ 1.2
SREBF1-223ENST00000584760 UGGT2Q9NYU1 1516 aa22.52■■□□□ 1.19
SREBF1-223ENST00000584760 DISP1Q96F81 1524 aa22.49■■□□□ 1.19
SREBF1-223ENST00000584760 TNIKQ9UKE5 1360 aa22.49■■□□□ 1.19
SREBF1-223ENST00000584760 CARMIL2Q6F5E8 1435 aa22.48■■□□□ 1.19
SREBF1-223ENST00000584760 EEA1Q15075 1411 aa22.47■■□□□ 1.19
SREBF1-223ENST00000584760 KIAA0556O60303 1618 aa22.46■■□□□ 1.19
SREBF1-223ENST00000584760 ASXL2Q76L83 1435 aa22.45■■□□□ 1.18
SREBF1-223ENST00000584760 ABCC2Q92887 1545 aa22.45■■□□□ 1.18
SREBF1-223ENST00000584760 PLB1Q6P1J6 1458 aa22.41■■□□□ 1.18
SREBF1-223ENST00000584760 CSRNP3Q8WYN3 585 aa22.39■■□□□ 1.17
SREBF1-223ENST00000584760 CHIC1Q5VXU3 224 aa22.37■■□□□ 1.17
SREBF1-223ENST00000584760 UACAQ9BZF9 1416 aa22.37■■□□□ 1.17
SREBF1-223ENST00000584760 UHRF1BP1LA0JNW5 1464 aa22.35■■□□□ 1.17
SREBF1-223ENST00000584760 GLI2P10070 1586 aa22.35■■□□□ 1.17
SREBF1-223ENST00000584760 KIF21BO75037 1637 aa22.34■■□□□ 1.17
SREBF1-223ENST00000584760 ILDR1Q86SU0 546 aaPredicted RBP22.33■■□□□ 1.17
SREBF1-223ENST00000584760 GOLGA3Q08378 1498 aa22.32■■□□□ 1.16
SREBF1-223ENST00000584760 PPRC1Q5VV67 1664 aaKnown RBP22.32■■□□□ 1.16
SREBF1-223ENST00000584760 ADGRL1O94910 1474 aa22.31■■□□□ 1.16
SREBF1-223ENST00000584760 COL17A1Q9UMD9 1497 aaPredicted RBP22.3■■□□□ 1.16
SREBF1-223ENST00000584760 EPRSP07814 1512 aaKnown RBP22.28■■□□□ 1.16
SREBF1-223ENST00000584760 KDM5BQ9UGL1 1544 aa22.26■■□□□ 1.15
SREBF1-223ENST00000584760 SAMD9Q5K651 1589 aa22.26■■□□□ 1.15
SREBF1-223ENST00000584760 FAM9AQ8IZU1 332 aaPredicted RBP22.24■■□□□ 1.15
SREBF1-223ENST00000584760 ZCCHC11Q5TAX3 1644 aaKnown RBP22.22■■□□□ 1.15
SREBF1-223ENST00000584760 TEX14Q8IWB6 1497 aa22.22■■□□□ 1.15
SREBF1-223ENST00000584760 ABCA8O94911 1581 aa22.21■■□□□ 1.15
SREBF1-223ENST00000584760 MAP3K4Q9Y6R4 1608 aa22.2■■□□□ 1.15
SREBF1-223ENST00000584760 KCNH8Q96L42 1107 aa22.14■■□□□ 1.13
SREBF1-223ENST00000584760 WDR7Q9Y4E6 1490 aa22.14■■□□□ 1.13
SREBF1-223ENST00000584760 EFCAB5A4FU69 1503 aa22.1■■□□□ 1.13
SREBF1-223ENST00000584760 HECW2Q9P2P5 1572 aa22.09■■□□□ 1.13
SREBF1-223ENST00000584760 CD109Q6YHK3 1445 aa22.08■■□□□ 1.13
SREBF1-223ENST00000584760 RAPGEF6Q8TEU7 1601 aa22.06■■□□□ 1.12
SREBF1-223ENST00000584760 P3H3Q8IVL6 736 aa22.05■■□□□ 1.12
SREBF1-223ENST00000584760 MAGI3Q5TCQ9 1506 aa22.03■■□□□ 1.12
SREBF1-223ENST00000584760 FHOD3Q2V2M9 1422 aa22.03■■□□□ 1.12
SREBF1-223ENST00000584760 ARID3CA6NKF2 412 aa21.99■■□□□ 1.11
SREBF1-223ENST00000584760 CFAP43Q8NDM7 1665 aa21.98■■□□□ 1.11
SREBF1-223ENST00000584760 RANGAP1P46060 587 aaPredicted RBP21.97■■□□□ 1.11
SREBF1-223ENST00000584760 ATP10BO94823 1461 aa21.96■■□□□ 1.11
SREBF1-223ENST00000584760 NUP153P49790 1475 aaKnown RBP21.96■■□□□ 1.11
SREBF1-223ENST00000584760 UBTFP17480 764 aaKnown RBP21.95■■□□□ 1.1
SREBF1-223ENST00000584760 EHMT2Q96KQ7 1210 aa21.95■■□□□ 1.1
SREBF1-223ENST00000584760 ARHGAP35Q9NRY4 1499 aa21.93■■□□□ 1.1
SREBF1-223ENST00000584760 ARAP3Q8WWN8 1544 aa21.87■■□□□ 1.09
SREBF1-223ENST00000584760 ABCA9Q8IUA7 1624 aa21.84■■□□□ 1.09
SREBF1-223ENST00000584760 RAPGEF3O95398 923 aa21.84■■□□□ 1.09
SREBF1-223ENST00000584760 FMN1Q68DA7 1419 aa21.82■■□□□ 1.08
SREBF1-223ENST00000584760 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.82■■□□□ 1.08
SREBF1-223ENST00000584760 HNRNPUL2Q1KMD3 747 aaKnown RBP21.82■■□□□ 1.08
SREBF1-223ENST00000584760 HECW1Q76N89 1606 aa21.81■■□□□ 1.08
SREBF1-223ENST00000584760 PHLDB1Q86UU1 1377 aa21.8■■□□□ 1.08
SREBF1-223ENST00000584760 FBXO41Q8TF61 875 aa21.78■■□□□ 1.08
SREBF1-223ENST00000584760 CDK13Q14004 1512 aaKnown RBP21.78■■□□□ 1.08
SREBF1-223ENST00000584760 LRRIQ1Q96JM4 1722 aa21.77■■□□□ 1.08
SREBF1-223ENST00000584760 PTPRMP28827 1452 aa21.77■■□□□ 1.08
SREBF1-223ENST00000584760 ARID4BQ4LE39 1312 aaPredicted RBP21.77■■□□□ 1.07
SREBF1-223ENST00000584760 PCF11O94913 1555 aaKnown RBP21.73■■□□□ 1.07
SREBF1-223ENST00000584760 NEO1Q92859 1461 aa21.72■■□□□ 1.07
SREBF1-223ENST00000584760 ADAMTSL3P82987 1691 aa21.72■■□□□ 1.07
SREBF1-223ENST00000584760 CLIP1P30622 1438 aa21.69■■□□□ 1.06
SREBF1-223ENST00000584760 TTC37Q6PGP7 1564 aa21.69■■□□□ 1.06
SREBF1-223ENST00000584760 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.68■■□□□ 1.06
SREBF1-223ENST00000584760 CASKIN1Q8WXD9 1431 aa21.65■■□□□ 1.06
SREBF1-223ENST00000584760 PLEKHD1A6NEE1 506 aa21.65■■□□□ 1.06
SREBF1-223ENST00000584760 FRMPD1Q5SYB0 1578 aa21.64■■□□□ 1.05
SREBF1-223ENST00000584760 BCORL1Q5H9F3 1711 aa21.63■■□□□ 1.05
SREBF1-223ENST00000584760 MADDQ8WXG6 1647 aa21.62■■□□□ 1.05
SREBF1-223ENST00000584760 PLPPR3Q6T4P5 718 aa21.62■■□□□ 1.05
SREBF1-223ENST00000584760 FYCO1Q9BQS8 1478 aa21.62■■□□□ 1.05
SREBF1-223ENST00000584760 KIF14Q15058 1648 aa21.61■■□□□ 1.05
SREBF1-223ENST00000584760 DENND4BO75064 1496 aaPredicted RBP21.6■■□□□ 1.05
SREBF1-223ENST00000584760 CCDC18Q5T9S5 1454 aa21.6■■□□□ 1.05
SREBF1-223ENST00000584760 CFAP74Q9C0B2 1584 aa21.6■■□□□ 1.05
SREBF1-223ENST00000584760 ATP1B4Q9UN42 357 aaPredicted RBP21.59■■□□□ 1.05
SREBF1-223ENST00000584760 LMTK3Q96Q04 1460 aa21.58■■□□□ 1.05
SREBF1-223ENST00000584760 MYO5CQ9NQX4 1742 aa21.58■■□□□ 1.05
SREBF1-223ENST00000584760 AKNAQ7Z591 1439 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms