RNA–Protein interactions for RNA: ENST00000584672.1

CSNK1D-224, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-224ENST00000584672 JPH4Q96JJ6 628 aa25.69■■□□□ 1.7
CSNK1D-224ENST00000584672 DIP2BQ9P265 1576 aa25.67■■□□□ 1.7
CSNK1D-224ENST00000584672 RUSC2Q8N2Y8 1516 aa25.65■■□□□ 1.7
CSNK1D-224ENST00000584672 NPM1P06748 294 aaKnown RBP eCLIP25.64■■□□□ 1.7
CSNK1D-224ENST00000584672 KDM6BO15054 1643 aa25.63■■□□□ 1.69
CSNK1D-224ENST00000584672 SUPT5HO00267 1087 aaKnown RBP25.63■■□□□ 1.69
CSNK1D-224ENST00000584672 TSPOAP1O95153 1857 aa25.62■■□□□ 1.69
CSNK1D-224ENST00000584672 KDM4FA0A1W2PPD8 638 aa25.62■■□□□ 1.69
CSNK1D-224ENST00000584672 ADCY10Q96PN6 1610 aa25.62■■□□□ 1.69
CSNK1D-224ENST00000584672 MAPKBP1O60336 1514 aa25.62■■□□□ 1.69
CSNK1D-224ENST00000584672 ILDR1Q86SU0 546 aaPredicted RBP25.5■■□□□ 1.67
CSNK1D-224ENST00000584672 TTBK1Q5TCY1 1321 aaPredicted RBP25.42■■□□□ 1.66
CSNK1D-224ENST00000584672 KIAA0586Q9BVV6 1533 aa25.37■■□□□ 1.65
CSNK1D-224ENST00000584672 ADGRL1O94910 1474 aa25.3■■□□□ 1.64
CSNK1D-224ENST00000584672 PPRC1Q5VV67 1664 aaKnown RBP25.29■■□□□ 1.64
CSNK1D-224ENST00000584672 PTPRGP23470 1445 aa25.29■■□□□ 1.64
CSNK1D-224ENST00000584672 CUL7Q14999 1698 aa25.26■■□□□ 1.63
CSNK1D-224ENST00000584672 IGF1RP08069 1367 aa25.25■■□□□ 1.63
CSNK1D-224ENST00000584672 ASXL2Q76L83 1435 aa25.25■■□□□ 1.63
CSNK1D-224ENST00000584672 ABCC2Q92887 1545 aa25.23■■□□□ 1.63
CSNK1D-224ENST00000584672 KIF27Q86VH2 1401 aa25.19■■□□□ 1.62
CSNK1D-224ENST00000584672 GLI2P10070 1586 aa25.18■■□□□ 1.62
CSNK1D-224ENST00000584672 TNIKQ9UKE5 1360 aa25.18■■□□□ 1.62
CSNK1D-224ENST00000584672 PLB1Q6P1J6 1458 aa25.17■■□□□ 1.62
CSNK1D-224ENST00000584672 HECW2Q9P2P5 1572 aa25.17■■□□□ 1.62
CSNK1D-224ENST00000584672 COL17A1Q9UMD9 1497 aaPredicted RBP25.15■■□□□ 1.62
CSNK1D-224ENST00000584672 CARMIL2Q6F5E8 1435 aa25.15■■□□□ 1.62
CSNK1D-224ENST00000584672 IQGAP2Q13576 1575 aa25.1■■□□□ 1.61
CSNK1D-224ENST00000584672 CARMIL1Q5VZK9 1371 aa25.09■■□□□ 1.61
CSNK1D-224ENST00000584672 MAP3K4Q9Y6R4 1608 aa25.08■■□□□ 1.61
CSNK1D-224ENST00000584672 UHRF1BP1LA0JNW5 1464 aa25.08■■□□□ 1.6
CSNK1D-224ENST00000584672 UACAQ9BZF9 1416 aa25.07■■□□□ 1.6
CSNK1D-224ENST00000584672 EPRSP07814 1512 aaKnown RBP25.07■■□□□ 1.6
CSNK1D-224ENST00000584672 ZCCHC11Q5TAX3 1644 aaKnown RBP25.03■■□□□ 1.6
CSNK1D-224ENST00000584672 DISP1Q96F81 1524 aa25.02■■□□□ 1.6
CSNK1D-224ENST00000584672 TEX14Q8IWB6 1497 aa25.01■■□□□ 1.59
CSNK1D-224ENST00000584672 KDM5BQ9UGL1 1544 aa25■■□□□ 1.59
CSNK1D-224ENST00000584672 KIAA0556O60303 1618 aa24.9■■□□□ 1.58
CSNK1D-224ENST00000584672 WDR7Q9Y4E6 1490 aa24.88■■□□□ 1.57
CSNK1D-224ENST00000584672 UGGT2Q9NYU1 1516 aa24.87■■□□□ 1.57
CSNK1D-224ENST00000584672 KIF21BO75037 1637 aa24.83■■□□□ 1.57
CSNK1D-224ENST00000584672 KCNH8Q96L42 1107 aa24.8■■□□□ 1.56
CSNK1D-224ENST00000584672 CD109Q6YHK3 1445 aa24.79■■□□□ 1.56
CSNK1D-224ENST00000584672 CFAP43Q8NDM7 1665 aa24.79■■□□□ 1.56
CSNK1D-224ENST00000584672 RAPGEF2Q9Y4G8 1499 aa24.79■■□□□ 1.56
CSNK1D-224ENST00000584672 MAGI3Q5TCQ9 1506 aa24.76■■□□□ 1.55
CSNK1D-224ENST00000584672 FBXO41Q8TF61 875 aa24.73■■□□□ 1.55
CSNK1D-224ENST00000584672 CTTNBP2Q8WZ74 1663 aa24.7■■□□□ 1.54
CSNK1D-224ENST00000584672 ABCA8O94911 1581 aa24.68■■□□□ 1.54
CSNK1D-224ENST00000584672 ARID3CA6NKF2 412 aa24.64■■□□□ 1.54
CSNK1D-224ENST00000584672 PTPRMP28827 1452 aa24.6■■□□□ 1.53
CSNK1D-224ENST00000584672 GOLGA3Q08378 1498 aa24.6■■□□□ 1.53
CSNK1D-224ENST00000584672 ADAMTSL3P82987 1691 aa24.59■■□□□ 1.53
CSNK1D-224ENST00000584672 ARAP3Q8WWN8 1544 aa24.58■■□□□ 1.53
CSNK1D-224ENST00000584672 MADDQ8WXG6 1647 aa24.51■■□□□ 1.51
CSNK1D-224ENST00000584672 RAPGEF3O95398 923 aa24.51■■□□□ 1.51
CSNK1D-224ENST00000584672 BCORL1Q5H9F3 1711 aa24.49■■□□□ 1.51
CSNK1D-224ENST00000584672 PCF11O94913 1555 aaKnown RBP24.48■■□□□ 1.51
CSNK1D-224ENST00000584672 ARID4BQ4LE39 1312 aaPredicted RBP24.48■■□□□ 1.51
CSNK1D-224ENST00000584672 P3H3Q8IVL6 736 aa24.48■■□□□ 1.51
CSNK1D-224ENST00000584672 ABCA9Q8IUA7 1624 aa24.47■■□□□ 1.51
CSNK1D-224ENST00000584672 ATP10BO94823 1461 aa24.47■■□□□ 1.51
CSNK1D-224ENST00000584672 LMTK3Q96Q04 1460 aa24.45■■□□□ 1.5
CSNK1D-224ENST00000584672 FRMPD1Q5SYB0 1578 aa24.44■■□□□ 1.5
CSNK1D-224ENST00000584672 RIMS1Q86UR5 1692 aaKnown RBP24.43■■□□□ 1.5
CSNK1D-224ENST00000584672 PLPPR3Q6T4P5 718 aa24.41■■□□□ 1.5
CSNK1D-224ENST00000584672 PHLDB1Q86UU1 1377 aa24.38■■□□□ 1.49
CSNK1D-224ENST00000584672 NEO1Q92859 1461 aa24.38■■□□□ 1.49
CSNK1D-224ENST00000584672 HSPA2P54652 639 aa24.37■■□□□ 1.49
CSNK1D-224ENST00000584672 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.36■■□□□ 1.49
CSNK1D-224ENST00000584672 HNRNPUL2Q1KMD3 747 aaKnown RBP24.36■■□□□ 1.49
CSNK1D-224ENST00000584672 PRXQ9BXM0 1461 aa24.36■■□□□ 1.49
CSNK1D-224ENST00000584672 FAM9AQ8IZU1 332 aaPredicted RBP24.35■■□□□ 1.49
CSNK1D-224ENST00000584672 ARHGEF40Q8TER5 1519 aa24.33■■□□□ 1.49
CSNK1D-224ENST00000584672 RAPGEF6Q8TEU7 1601 aa24.32■■□□□ 1.48
CSNK1D-224ENST00000584672 RICTORQ6R327 1708 aa24.27■■□□□ 1.48
CSNK1D-224ENST00000584672 SAMD9Q5K651 1589 aa24.26■■□□□ 1.47
CSNK1D-224ENST00000584672 SIGLEC1Q9BZZ2 1709 aa24.24■■□□□ 1.47
CSNK1D-224ENST00000584672 DENND4BO75064 1496 aaPredicted RBP24.24■■□□□ 1.47
CSNK1D-224ENST00000584672 NUP153P49790 1475 aaKnown RBP24.22■■□□□ 1.47
CSNK1D-224ENST00000584672 RANGAP1P46060 587 aaPredicted RBP24.21■■□□□ 1.47
CSNK1D-224ENST00000584672 CERKQ8TCT0 537 aa24.21■■□□□ 1.47
CSNK1D-224ENST00000584672 MLECQ14165 292 aa24.2■■□□□ 1.46
CSNK1D-224ENST00000584672 AKNAQ7Z591 1439 aa24.19■■□□□ 1.46
CSNK1D-224ENST00000584672 FANCAO15360 1455 aa24.19■■□□□ 1.46
CSNK1D-224ENST00000584672 YEATS2Q9ULM3 1422 aa24.18■■□□□ 1.46
CSNK1D-224ENST00000584672 FER1L4A9Z1Z3 1794 aa24.16■■□□□ 1.46
CSNK1D-224ENST00000584672 ZFYVE16Q7Z3T8 1539 aa24.16■■□□□ 1.46
CSNK1D-224ENST00000584672 POGZQ7Z3K3 1410 aa24.16■■□□□ 1.46
CSNK1D-224ENST00000584672 CFAP74Q9C0B2 1584 aa24.16■■□□□ 1.46
CSNK1D-224ENST00000584672 FHOD3Q2V2M9 1422 aa24.15■■□□□ 1.46
CSNK1D-224ENST00000584672 TTC37Q6PGP7 1564 aa24.14■■□□□ 1.45
CSNK1D-224ENST00000584672 ZMYM4Q5VZL5 1548 aa24.13■■□□□ 1.45
CSNK1D-224ENST00000584672 EFCAB5A4FU69 1503 aa24.12■■□□□ 1.45
CSNK1D-224ENST00000584672 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.12■■□□□ 1.45
CSNK1D-224ENST00000584672 DISP3Q9P2K9 1392 aa24.11■■□□□ 1.45
CSNK1D-224ENST00000584672 PLEKHD1A6NEE1 506 aa24.1■■□□□ 1.45
CSNK1D-224ENST00000584672 ILDR2Q71H61 639 aa24.1■■□□□ 1.45
CSNK1D-224ENST00000584672 HECW1Q76N89 1606 aa24.09■■□□□ 1.45
CSNK1D-224ENST00000584672 PREX1Q8TCU6 1659 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms