RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 ILDR1Q86SU0 546 aaPredicted RBP18.43■□□□□ 0.54
GGA3-219ENST00000584550 ERICH3Q5RHP9 1530 aa18.42■□□□□ 0.54
GGA3-219ENST00000584550 SUPT5HO00267 1087 aaKnown RBP18.41■□□□□ 0.54
GGA3-219ENST00000584550 TOP2BQ02880 1626 aa18.41■□□□□ 0.54
GGA3-219ENST00000584550 BIVM-ERCC5R4GMW8 1640 aa18.41■□□□□ 0.54
GGA3-219ENST00000584550 TSPOAP1O95153 1857 aa18.39■□□□□ 0.54
GGA3-219ENST00000584550 DIP2BQ9P265 1576 aa18.39■□□□□ 0.53
GGA3-219ENST00000584550 KDM6BO15054 1643 aa18.38■□□□□ 0.53
GGA3-219ENST00000584550 MAPKBP1O60336 1514 aa18.37■□□□□ 0.53
GGA3-219ENST00000584550 ADCY10Q96PN6 1610 aa18.36■□□□□ 0.53
GGA3-219ENST00000584550 RUSC2Q8N2Y8 1516 aa18.34■□□□□ 0.53
GGA3-219ENST00000584550 TTBK1Q5TCY1 1321 aaPredicted RBP18.3■□□□□ 0.52
GGA3-219ENST00000584550 KIAA0586Q9BVV6 1533 aa18.19■□□□□ 0.5
GGA3-219ENST00000584550 PTPRGP23470 1445 aa18.17■□□□□ 0.5
GGA3-219ENST00000584550 ADGRL1O94910 1474 aa18.17■□□□□ 0.5
GGA3-219ENST00000584550 IGF1RP08069 1367 aa18.14■□□□□ 0.49
GGA3-219ENST00000584550 PPRC1Q5VV67 1664 aaKnown RBP18.12■□□□□ 0.49
GGA3-219ENST00000584550 ASXL2Q76L83 1435 aa18.12■□□□□ 0.49
GGA3-219ENST00000584550 ABCC2Q92887 1545 aa18.1■□□□□ 0.49
GGA3-219ENST00000584550 CUL7Q14999 1698 aa18.08■□□□□ 0.48
GGA3-219ENST00000584550 HECW2Q9P2P5 1572 aa18.08■□□□□ 0.48
GGA3-219ENST00000584550 COL17A1Q9UMD9 1497 aaPredicted RBP18.07■□□□□ 0.48
GGA3-219ENST00000584550 TNIKQ9UKE5 1360 aa18.07■□□□□ 0.48
GGA3-219ENST00000584550 PLB1Q6P1J6 1458 aa18.07■□□□□ 0.48
GGA3-219ENST00000584550 GLI2P10070 1586 aa18.06■□□□□ 0.48
GGA3-219ENST00000584550 CARMIL2Q6F5E8 1435 aa18.06■□□□□ 0.48
GGA3-219ENST00000584550 KIF27Q86VH2 1401 aa18.06■□□□□ 0.48
GGA3-219ENST00000584550 CARMIL1Q5VZK9 1371 aa18.01■□□□□ 0.47
GGA3-219ENST00000584550 UACAQ9BZF9 1416 aa17.99■□□□□ 0.47
GGA3-219ENST00000584550 EPRSP07814 1512 aaKnown RBP17.99■□□□□ 0.47
GGA3-219ENST00000584550 UHRF1BP1LA0JNW5 1464 aa17.98■□□□□ 0.47
GGA3-219ENST00000584550 MAP3K4Q9Y6R4 1608 aa17.98■□□□□ 0.47
GGA3-219ENST00000584550 IQGAP2Q13576 1575 aa17.96■□□□□ 0.47
GGA3-219ENST00000584550 TEX14Q8IWB6 1497 aa17.95■□□□□ 0.46
GGA3-219ENST00000584550 DISP1Q96F81 1524 aa17.93■□□□□ 0.46
GGA3-219ENST00000584550 ZCCHC11Q5TAX3 1644 aaKnown RBP17.93■□□□□ 0.46
GGA3-219ENST00000584550 KDM5BQ9UGL1 1544 aa17.92■□□□□ 0.46
GGA3-219ENST00000584550 KCNH8Q96L42 1107 aa17.87■□□□□ 0.45
GGA3-219ENST00000584550 WDR7Q9Y4E6 1490 aa17.83■□□□□ 0.45
GGA3-219ENST00000584550 FBXO41Q8TF61 875 aa17.83■□□□□ 0.44
GGA3-219ENST00000584550 CD109Q6YHK3 1445 aa17.81■□□□□ 0.44
GGA3-219ENST00000584550 KIAA0556O60303 1618 aa17.81■□□□□ 0.44
GGA3-219ENST00000584550 UGGT2Q9NYU1 1516 aa17.81■□□□□ 0.44
GGA3-219ENST00000584550 KIF21BO75037 1637 aa17.8■□□□□ 0.44
GGA3-219ENST00000584550 RAPGEF2Q9Y4G8 1499 aa17.77■□□□□ 0.44
GGA3-219ENST00000584550 MAGI3Q5TCQ9 1506 aa17.76■□□□□ 0.43
GGA3-219ENST00000584550 CFAP43Q8NDM7 1665 aa17.75■□□□□ 0.43
GGA3-219ENST00000584550 ARID3CA6NKF2 412 aa17.72■□□□□ 0.43
GGA3-219ENST00000584550 PTPRMP28827 1452 aa17.68■□□□□ 0.42
GGA3-219ENST00000584550 ABCA8O94911 1581 aa17.67■□□□□ 0.42
GGA3-219ENST00000584550 CTTNBP2Q8WZ74 1663 aa17.64■□□□□ 0.42
GGA3-219ENST00000584550 ARAP3Q8WWN8 1544 aa17.64■□□□□ 0.41
GGA3-219ENST00000584550 RAPGEF3O95398 923 aa17.64■□□□□ 0.41
GGA3-219ENST00000584550 GOLGA3Q08378 1498 aa17.63■□□□□ 0.41
GGA3-219ENST00000584550 ADAMTSL3P82987 1691 aa17.63■□□□□ 0.41
GGA3-219ENST00000584550 ARID4BQ4LE39 1312 aaPredicted RBP17.63■□□□□ 0.41
GGA3-219ENST00000584550 P3H3Q8IVL6 736 aa17.61■□□□□ 0.41
GGA3-219ENST00000584550 PLPPR3Q6T4P5 718 aa17.6■□□□□ 0.41
GGA3-219ENST00000584550 MADDQ8WXG6 1647 aa17.57■□□□□ 0.4
GGA3-219ENST00000584550 PCF11O94913 1555 aaKnown RBP17.57■□□□□ 0.4
GGA3-219ENST00000584550 ATP10BO94823 1461 aa17.56■□□□□ 0.4
GGA3-219ENST00000584550 LMTK3Q96Q04 1460 aa17.56■□□□□ 0.4
GGA3-219ENST00000584550 BCORL1Q5H9F3 1711 aa17.55■□□□□ 0.4
GGA3-219ENST00000584550 HSPA2P54652 639 aa17.55■□□□□ 0.4
GGA3-219ENST00000584550 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.54■□□□□ 0.4
GGA3-219ENST00000584550 HNRNPUL2Q1KMD3 747 aaKnown RBP17.54■□□□□ 0.4
GGA3-219ENST00000584550 FAM9AQ8IZU1 332 aaPredicted RBP17.54■□□□□ 0.4
GGA3-219ENST00000584550 ABCA9Q8IUA7 1624 aa17.53■□□□□ 0.4
GGA3-219ENST00000584550 PHLDB1Q86UU1 1377 aa17.53■□□□□ 0.4
GGA3-219ENST00000584550 RIMS1Q86UR5 1692 aaKnown RBP17.51■□□□□ 0.39
GGA3-219ENST00000584550 FRMPD1Q5SYB0 1578 aa17.49■□□□□ 0.39
GGA3-219ENST00000584550 NEO1Q92859 1461 aa17.48■□□□□ 0.39
GGA3-219ENST00000584550 CERKQ8TCT0 537 aa17.46■□□□□ 0.39
GGA3-219ENST00000584550 PRXQ9BXM0 1461 aa17.44■□□□□ 0.38
GGA3-219ENST00000584550 RANGAP1P46060 587 aaPredicted RBP17.42■□□□□ 0.38
GGA3-219ENST00000584550 MLECQ14165 292 aa17.42■□□□□ 0.38
GGA3-219ENST00000584550 RAPGEF6Q8TEU7 1601 aa17.41■□□□□ 0.38
GGA3-219ENST00000584550 ILDR2Q71H61 639 aa17.4■□□□□ 0.38
GGA3-219ENST00000584550 ARHGEF40Q8TER5 1519 aa17.4■□□□□ 0.38
GGA3-219ENST00000584550 DENND4BO75064 1496 aaPredicted RBP17.39■□□□□ 0.37
GGA3-219ENST00000584550 DISP3Q9P2K9 1392 aa17.38■□□□□ 0.37
GGA3-219ENST00000584550 RICTORQ6R327 1708 aa17.38■□□□□ 0.37
GGA3-219ENST00000584550 AKNAQ7Z591 1439 aa17.38■□□□□ 0.37
GGA3-219ENST00000584550 SIGLEC1Q9BZZ2 1709 aa17.37■□□□□ 0.37
GGA3-219ENST00000584550 POGZQ7Z3K3 1410 aa17.36■□□□□ 0.37
GGA3-219ENST00000584550 PLEKHD1A6NEE1 506 aa17.35■□□□□ 0.37
GGA3-219ENST00000584550 FANCAO15360 1455 aa17.35■□□□□ 0.37
GGA3-219ENST00000584550 NUP153P49790 1475 aaKnown RBP17.35■□□□□ 0.37
GGA3-219ENST00000584550 SAMD9Q5K651 1589 aa17.35■□□□□ 0.37
GGA3-219ENST00000584550 YEATS2Q9ULM3 1422 aa17.34■□□□□ 0.37
GGA3-219ENST00000584550 FHOD3Q2V2M9 1422 aa17.32■□□□□ 0.36
GGA3-219ENST00000584550 ZFYVE16Q7Z3T8 1539 aa17.31■□□□□ 0.36
GGA3-219ENST00000584550 FER1L4A9Z1Z3 1794 aa17.31■□□□□ 0.36
GGA3-219ENST00000584550 SOCS7O14512 581 aa17.31■□□□□ 0.36
GGA3-219ENST00000584550 CEBPAP49715 358 aaPredicted RBP17.3■□□□□ 0.36
GGA3-219ENST00000584550 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.29■□□□□ 0.36
GGA3-219ENST00000584550 CFAP74Q9C0B2 1584 aa17.28■□□□□ 0.36
GGA3-219ENST00000584550 EFCAB5A4FU69 1503 aa17.27■□□□□ 0.36
GGA3-219ENST00000584550 ZMYM4Q5VZL5 1548 aa17.27■□□□□ 0.36
GGA3-219ENST00000584550 HECW1Q76N89 1606 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms